##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840963.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6170751 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.797905959906664 39.0 37.0 39.0 32.0 39.0 2 37.55019461974726 39.0 37.0 39.0 35.0 39.0 3 37.67839862603434 39.0 37.0 39.0 35.0 39.0 4 38.2411526571077 39.0 38.0 40.0 35.0 41.0 5 38.74187971609938 40.0 38.0 41.0 35.0 41.0 6 38.69443946125844 40.0 38.0 41.0 35.0 41.0 7 38.643746279828825 40.0 38.0 41.0 35.0 41.0 8 38.4647627168881 40.0 38.0 41.0 34.0 41.0 9 38.280643960516315 40.0 37.0 41.0 34.0 41.0 10 38.090258543895224 40.0 37.0 41.0 34.0 41.0 11 37.87621133959222 39.0 36.0 41.0 33.0 41.0 12 37.802481253902485 39.0 36.0 41.0 33.0 41.0 13 37.63544096982685 39.0 36.0 40.0 33.0 41.0 14 37.4905106363877 39.0 35.0 40.0 33.0 41.0 15 37.44736791356514 39.0 35.0 40.0 33.0 41.0 16 37.2801804837045 38.0 35.0 40.0 33.0 41.0 17 37.31093476304586 38.0 35.0 40.0 33.0 41.0 18 37.30364796764608 38.0 35.0 40.0 33.0 41.0 19 37.347334546475786 38.0 35.0 40.0 33.0 41.0 20 37.249057529626455 38.0 35.0 40.0 33.0 41.0 21 37.17620367439879 38.0 35.0 40.0 33.0 41.0 22 36.89359544729645 38.0 35.0 40.0 33.0 41.0 23 36.79417075814597 37.0 35.0 40.0 33.0 41.0 24 36.52216513030586 37.0 35.0 40.0 32.0 41.0 25 36.42000059778262 37.0 35.0 40.0 32.0 41.0 26 36.2989234476479 36.0 35.0 40.0 32.0 41.0 27 36.169854890141956 36.0 35.0 40.0 32.0 41.0 28 36.056729614515 36.0 35.0 40.0 32.0 41.0 29 35.96131718720213 35.0 35.0 40.0 32.0 41.0 30 35.84794270853066 35.0 35.0 39.0 32.0 41.0 31 35.60414067638119 35.0 34.0 39.0 31.0 41.0 32 35.54164216378607 35.0 34.0 39.0 31.0 41.0 33 35.449750316213084 35.0 34.0 39.0 31.0 41.0 34 35.37341675746631 35.0 34.0 39.0 31.0 41.0 35 35.25552694291404 35.0 34.0 38.0 31.0 41.0 36 35.158240289749784 35.0 34.0 38.0 31.0 41.0 37 35.14614950320588 35.0 34.0 37.0 31.0 40.0 38 35.05538883237154 35.0 34.0 37.0 31.0 40.0 39 34.99668842666324 35.0 34.0 37.0 31.0 40.0 40 34.97346393413811 35.0 34.0 37.0 31.0 40.0 41 34.91836349782901 35.0 34.0 37.0 31.0 40.0 42 34.80083489396196 35.0 34.0 36.0 31.0 40.0 43 34.71404424313113 35.0 34.0 36.0 31.0 40.0 44 34.55267936799036 35.0 34.0 36.0 31.0 39.0 45 34.394197815111454 35.0 34.0 36.0 30.0 39.0 46 34.196648838373484 35.0 33.0 36.0 30.0 39.0 47 34.089080430868876 35.0 33.0 35.0 30.0 39.0 48 34.049697146960966 35.0 33.0 36.0 29.0 39.0 49 34.04763083802151 35.0 33.0 35.0 29.0 39.0 50 34.49909960179573 35.0 33.0 37.0 30.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 18.0 21 48.0 22 162.0 23 401.0 24 1128.0 25 2787.0 26 6050.0 27 12913.0 28 26358.0 29 50649.0 30 91535.0 31 155776.0 32 247978.0 33 402486.0 34 668412.0 35 764036.0 36 985345.0 37 946340.0 38 762453.0 39 716108.0 40 329763.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 44.77701336514794 17.13088082795757 38.092105806894494 2 27.177000011830003 18.943334449891108 29.448036389736032 24.43162914854286 3 24.8703277769594 16.384018736131146 28.262329820146686 30.483323666762765 4 21.61471107811675 17.815740742091197 32.491409878635515 28.078138301156535 5 22.231572785873226 21.3548399538403 29.176383879368977 27.237203380917492 6 24.701174946128923 22.134015778630513 27.748372929000055 25.416436346240513 7 29.920685504892354 19.259876147976154 22.744508731595232 28.07492961553626 8 27.68769960090757 20.600166819241288 23.2154400655609 28.49669351429024 9 27.124461836168727 19.618892416822522 26.203471830252106 27.053173916756645 10 30.54552031025073 17.434555372595653 24.706960303535176 27.31296401361844 11 29.16085902672138 19.744258032774294 23.936324768249438 27.15855817225488 12 30.638782864516816 19.912065808521522 22.434984007619168 27.01416731934249 13 29.9679244876353 18.740863146155142 24.829198261281327 26.462014104928233 14 26.031871971499093 21.368922518507066 21.278560745685574 31.320644764308263 15 25.60048201588429 21.963242399506964 23.94340656429015 28.492869020318594 16 28.35215681203147 22.856926166685383 21.119633574584356 27.67128344669879 17 28.254243284164275 24.388425331049657 19.478714989472106 27.87861639531396 18 27.195539084302705 20.29996024795037 19.76056074860256 32.74393991914437 19 30.25109909636607 19.91323260329253 21.025560746171738 28.81010755416966 20 30.304074820066475 19.44008111816536 22.860264496169105 27.395579565599064 21 29.687796509695495 23.60335071047268 19.211794480120815 27.497058299711007 22 30.64485992061582 21.690730998544584 22.22142815355862 25.442980927280974 23 31.41692153839946 22.109237595229494 21.18032310815977 25.293517758211276 24 32.5640752640967 20.854155353213898 22.823267378638352 23.758502004051046 25 30.139938297727433 23.352443322123005 21.927450422833207 24.580167957316363 26 31.87288378332569 23.848866818116722 20.564616791510037 23.71363260704755 27 29.737392348032525 23.819990804233353 20.64302677751115 25.799590070222965 28 30.640697109061783 22.710493699237215 20.98588738067341 25.662921811027594 29 30.837179142091 23.698402379113286 20.835219270830983 24.62919920796473 30 31.674669185713167 23.7640212468775 19.455256194269673 25.10605337313966 31 28.617036050987227 23.688504484338853 21.768621680092515 25.925837784581407 32 27.527082784819974 22.641757978974432 23.803318710687975 26.027840525517625 33 27.31785226967648 21.612178147669432 23.579151524880505 27.49081805777358 34 28.09933515838874 21.96434658764135 24.805103183947878 25.131215070022034 35 26.085699347929058 20.769149470699293 22.9835958740212 30.161555307350447 36 27.457804480763333 22.02423596436106 25.607079001536952 24.910880553338654 37 25.815844119529423 24.775527469091113 23.93816906404053 25.470459347338938 38 27.041554174834985 22.93533487215107 22.567962158996902 27.455148794017042 39 27.537153191591546 23.81129917777581 22.046101679492345 26.6054459511403 40 26.290666821275455 23.34804116059097 23.170253172494153 27.191038845639426 41 27.45108102247752 22.07127194931932 22.02971989295076 28.447927135252403 42 25.48370862655378 24.161395829448317 22.511734516509456 27.84316102748844 43 27.790765431738258 21.619810967395217 23.249647667379286 27.339775933487235 44 26.730004042730016 23.72782845081746 22.667747527502208 26.87441997895032 45 27.156341833368362 21.546943615072664 23.96633314153406 27.330381410024906 46 25.77928239463474 24.107288717132867 23.720837671597035 26.392591216635353 47 27.84876259888078 21.896847313484646 23.4714916471381 26.782898440496478 48 25.155649022782296 24.321653134058643 20.19012250065569 30.332575342503375 49 25.895037061413817 23.708021876420165 20.991125110348467 29.405815951817548 50 22.603568851064225 28.315044835449633 24.35571378174163 24.725672531744515 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 68968.0 1 54250.0 2 43652.5 3 42666.5 4 31725.5 5 20297.0 6 12010.5 7 10971.0 8 14574.5 9 16313.5 10 15102.0 11 14077.0 12 13752.5 13 12694.0 14 11617.0 15 11436.5 16 11634.5 17 11678.0 18 12082.5 19 13038.5 20 14543.5 21 17331.0 22 20708.5 23 26358.5 24 31619.0 25 32894.5 26 34980.5 27 39650.5 28 43668.0 29 48061.0 30 54186.5 31 64024.5 32 79422.5 33 90749.0 34 99198.0 35 104506.0 36 105312.0 37 111060.5 38 115645.0 39 122807.0 40 143284.0 41 174867.0 42 201920.0 43 214690.5 44 217602.5 45 210145.5 46 217060.0 47 238391.0 48 264665.0 49 306950.5 50 348368.5 51 371679.0 52 387980.0 53 390957.5 54 383602.5 55 383354.0 56 388529.5 57 404430.0 58 415614.0 59 411183.0 60 413611.0 61 429776.0 62 434696.5 63 422247.0 64 397125.5 65 373020.0 66 363036.5 67 360548.0 68 353108.0 69 333203.0 70 294310.5 71 260426.5 72 244101.0 73 227366.5 74 211838.0 75 192256.5 76 159914.5 77 117700.0 78 87233.5 79 69597.5 80 53626.0 81 40295.0 82 29948.0 83 24609.0 84 22620.0 85 20721.5 86 17203.0 87 13609.0 88 8536.0 89 3924.0 90 1953.0 91 981.5 92 689.0 93 611.5 94 761.0 95 832.5 96 729.0 97 695.0 98 347.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 48124.0 25 33931.0 26 31561.0 27 35007.0 28 37041.0 29 46332.0 30 55948.0 31 45058.0 32 56837.0 33 43004.0 34 41902.0 35 38711.0 36 35449.0 37 44404.0 38 38685.0 39 36698.0 40 46252.0 41 45060.0 42 68494.0 43 103219.0 44 310270.0 45 552013.0 46 697952.0 47 765835.0 48 998574.0 49 1046996.0 50 867394.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.025309273189144 #Duplication Level Percentage of deduplicated Percentage of total 1 78.41828436898233 15.70350397161765 2 9.912767498708984 3.970124698297299 3 3.1344907748004456 1.8830744153801153 4 1.4690113300315486 1.1766962483880272 5 0.82298229951666 0.8240237537090748 6 0.5887202724878334 0.7073583319179029 7 0.4052775094741899 0.5681065228081947 8 0.31404781383773295 0.5031123678935625 9 0.24789773412564148 0.44678059145899063 >10 2.5868814333049315 12.286288032529017 >50 1.1895446590646073 17.22591166199704 >100 0.8460578194069692 28.80435966090571 >500 0.04341867818264426 6.011454862214752 >1k 0.018677308491975464 6.870872527816167 >5k 0.0014553746876863997 1.9879832024003354 >10k+ 4.8512489589546656E-4 1.0303491506662088 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 10670 0.17291250287039617 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGG 10542 0.17083820105526865 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCA 9589 0.15539437582232696 No Hit CTTTTCCAAGCGGCTGCCGAAGATGGCGGAGG 8758 0.14192761950692875 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6450 0.10452536490291053 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.01427703046193243 0.0 0.0 0.0 0.0 2 0.029056430894716056 0.0 0.0 0.0 0.0 3 0.03779118619435463 0.0 0.0 0.0 0.0 4 0.04767653078207174 0.0 0.0 0.0 0.0 5 0.057480847955135445 0.0 0.0 0.0 0.0 6 0.0732325773637601 0.0 0.0 0.0 0.0 7 0.08399301802973415 0.0 0.0 0.0 0.0 8 0.09357045844176827 0.0 0.0 0.0 0.0 9 0.10343959754655471 0.0 0.0 0.0 0.0 10 0.11334114761720251 0.0 0.0 0.0 0.0 11 0.1222541632290786 0.0 0.0 0.0 0.0 12 0.1319612475045582 0.0 0.0 0.0 0.0 13 0.14131181115556274 0.0 0.0 0.0 0.0 14 0.15131059412379466 0.0 0.0 0.0 0.0 15 0.16143902095547202 0.0 0.0 0.0 0.0 16 0.17111369426509027 0.0 0.0 0.0 0.0 17 0.1826844090775985 0.0 0.0 0.0 0.0 18 0.20313572853612144 0.0 0.0 0.0 0.0 19 0.21410684048019438 0.0 0.0 0.0 0.0 20 0.22394356861911946 0.0 0.0 0.0 0.0 21 0.23512535184129127 0.0 0.0 0.0 0.0 22 0.24447591549229583 0.0 0.0 0.0 0.0 23 0.25562528774860627 0.0 0.0 0.0 0.0 24 0.26776319446368846 0.0 0.0 0.0 0.0 25 0.2796094024860183 0.0 0.0 0.0 0.0 26 0.29408089874311893 0.0 0.0 0.0 0.0 27 0.30558679162390445 0.0 0.0 0.0 0.0 28 0.3184539450708674 0.0 0.0 0.0 0.0 29 0.3310456053080087 0.0 0.0 0.0 0.0 30 0.3449661151454661 0.0 0.0 0.0 0.0 31 0.3583356385632802 0.0 0.0 0.0 0.0 32 0.3713972578054114 0.0 0.0 0.0 0.0 33 0.3840051235254834 0.0 0.0 0.0 0.0 34 0.39461971484508124 0.0 0.0 0.0 0.0 35 0.40448885394986767 0.0 0.0 0.0 0.0 36 0.41361254083984267 0.0 0.0 0.0 0.0 37 0.42072674784641284 0.0 0.0 0.0 0.0 38 0.4263014339745681 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTATA 30 7.2759576E-12 280.3258 44 ACGTATG 20 7.9764504E-8 280.32578 44 CTATCAT 4925 0.0 196.93954 44 TAAGCCA 2480 0.0 167.2912 44 ACGACAC 145 0.0 164.32892 44 TTGACGC 70 0.0 160.18617 44 ATTGTAG 140 0.0 120.139626 44 TACGATC 50 7.651965E-6 112.13031 44 ACTTCTA 1780 0.0 106.30332 44 AACGACA 505 0.0 99.864845 43 TGCATGA 185 0.0 90.91647 44 CGTGTGC 720 0.0 89.548515 44 ATATATC 100 2.8703653E-8 84.09773 44 CATACAT 185 0.0 83.340096 44 AACTACC 1105 0.0 81.18032 44 ATTAAGC 2335 0.0 81.114845 42 CTTTACA 1555 0.0 79.32048 44 CCTATCA 5695 0.0 78.24176 43 GGTAAGG 110 5.5588316E-8 76.452484 44 ATAGCCA 440 0.0 76.452484 44 >>END_MODULE