##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840962.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7024653 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.41679524953047 39.0 37.0 39.0 35.0 39.0 2 37.84045574920213 39.0 38.0 39.0 35.0 39.0 3 37.97234340258515 39.0 38.0 39.0 35.0 39.0 4 38.53129969551521 39.0 38.0 41.0 35.0 41.0 5 39.23740090791673 40.0 39.0 41.0 35.0 41.0 6 39.178759577163454 40.0 38.0 41.0 35.0 41.0 7 39.21362734927975 40.0 38.0 41.0 35.0 41.0 8 39.12406548764758 40.0 38.0 41.0 35.0 41.0 9 39.02355475779373 40.0 38.0 41.0 35.0 41.0 10 38.93982549743026 40.0 38.0 41.0 35.0 41.0 11 38.76620467943399 40.0 38.0 41.0 35.0 41.0 12 38.79152806551441 40.0 38.0 41.0 35.0 41.0 13 38.69387569748997 40.0 38.0 41.0 35.0 41.0 14 38.66029738408431 40.0 38.0 41.0 35.0 41.0 15 38.67793768603232 40.0 38.0 41.0 35.0 41.0 16 38.59409397161682 40.0 38.0 41.0 35.0 41.0 17 38.63464572556111 40.0 38.0 41.0 35.0 41.0 18 38.66194686057803 40.0 38.0 41.0 35.0 41.0 19 38.77339535490223 40.0 38.0 41.0 35.0 41.0 20 38.761427646319326 40.0 38.0 41.0 35.0 41.0 21 38.74034034136633 40.0 38.0 41.0 35.0 41.0 22 38.66109315292869 40.0 38.0 41.0 35.0 41.0 23 38.562508781572554 40.0 37.0 41.0 35.0 41.0 24 38.36576312025662 40.0 37.0 41.0 34.0 41.0 25 38.32542730469741 40.0 37.0 41.0 34.0 41.0 26 38.27854290331435 40.0 37.0 41.0 34.0 41.0 27 38.18903786648818 40.0 36.0 41.0 34.0 41.0 28 38.106392663186725 40.0 36.0 41.0 34.0 41.0 29 38.00655180479818 40.0 35.0 41.0 33.0 41.0 30 37.922876901806205 40.0 35.0 41.0 33.0 41.0 31 37.7727706699484 40.0 35.0 41.0 33.0 41.0 32 37.665074277467376 39.0 35.0 41.0 33.0 41.0 33 37.557449620602384 39.0 35.0 41.0 33.0 41.0 34 37.490964114780766 39.0 35.0 41.0 33.0 41.0 35 37.32462612415732 39.0 35.0 41.0 33.0 41.0 36 37.27100085278451 39.0 35.0 41.0 33.0 41.0 37 37.18279865284941 38.0 35.0 41.0 33.0 41.0 38 37.15088693887173 38.0 35.0 41.0 33.0 41.0 39 37.05170609926529 38.0 35.0 41.0 33.0 41.0 40 36.997985795116634 38.0 35.0 41.0 33.0 41.0 41 36.911173098386904 37.0 35.0 40.0 33.0 41.0 42 36.793877538982194 37.0 35.0 40.0 33.0 41.0 43 36.699930677921564 37.0 35.0 40.0 33.0 41.0 44 36.55624498861971 37.0 35.0 40.0 32.0 41.0 45 36.36270798473699 36.0 35.0 40.0 32.0 41.0 46 36.12188881557305 36.0 35.0 40.0 31.0 41.0 47 35.93450273420502 36.0 34.0 40.0 31.0 41.0 48 35.89915666788566 36.0 34.0 40.0 31.0 41.0 49 35.9888489077114 36.0 34.0 40.0 31.0 41.0 50 36.21512742595519 37.0 34.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 18.0 21 83.0 22 148.0 23 343.0 24 665.0 25 1306.0 26 2474.0 27 5228.0 28 11172.0 29 22321.0 30 43144.0 31 79438.0 32 135109.0 33 237888.0 34 458067.0 35 395123.0 36 628510.0 37 947461.0 38 1103790.0 39 1427159.0 40 1525204.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 42.255368343461235 18.081661827281717 39.662969829257044 2 25.538670735764455 20.546281787869095 32.52014014073008 21.394907335636365 3 24.681845494716963 17.526032958496312 28.399481084688453 29.392640462098267 4 21.95043655537149 20.30733760087509 33.47910565831508 24.263120185438343 5 22.197623142381552 20.24387539142503 30.07277370141984 27.485727764773575 6 22.535219889153243 24.180027113083025 27.864721574147506 25.42003142361623 7 29.727034203682372 19.92385958423854 21.90029884750179 28.448807364577295 8 25.305933261045066 20.862468224409092 25.40163905605017 28.429959458495674 9 26.686570852681264 21.268466926409037 26.479201179047564 25.56576104186214 10 28.16890741791801 19.488991128814476 23.94783059035087 28.394270862916642 11 26.872345153561323 21.596952902869365 24.617457972657157 26.91324397091216 12 28.084789383902663 22.79060616944353 23.164418228202873 25.960186218450932 13 28.272713257153057 20.86253940230215 25.235239377660363 25.62950796288443 14 24.35276162395495 22.197950560689616 23.2776053137429 30.171682501612533 15 26.069942529545585 23.373595820320233 24.059380584350574 26.497081065783608 16 26.377616090075907 24.217295857887926 21.23548309076619 28.16960496126997 17 26.23459123176618 26.14670076941879 20.80125523637965 26.817452762435384 18 26.2793051841849 22.399383998042325 20.28997019496906 31.031340622803715 19 28.53335246595099 21.49119678936454 22.350840674977114 27.624610069707355 20 27.669694147169977 21.16404895729369 24.89848253002675 26.267774365509585 21 28.15497078645735 26.463855225304368 20.144767293131775 25.236406695106506 22 29.476274486440822 23.427719490201156 21.524835461623514 25.571170561734508 23 31.21320013956561 22.369033744442607 21.657183635974615 24.760582480017163 24 28.373287620043296 23.06000025908753 23.357851270375917 25.208860850493252 25 27.658089155978168 24.737264071629596 21.418910908957727 26.185735863434513 26 29.026918723653505 25.22465170933859 22.562116667735356 23.186312899272547 27 27.17025328475775 26.85694772875185 20.94309546584153 25.029703520648866 28 27.215022638515947 23.33172642405972 21.996246667117475 27.45700427030686 29 28.108594903583278 25.751304805485297 22.120992383152295 24.019107907779123 30 27.469409420194975 26.436919424823245 21.242045066359648 24.85162608862213 31 26.578124134999186 25.626034855517666 22.781357102827894 25.014483906655254 32 25.92721089864849 24.53404545991732 25.2403896666534 24.298353974780788 33 25.38916893311069 22.8117816204268 23.94794504732624 27.85110439913628 34 27.63524015665157 24.01857070802073 24.275000715037937 24.071188420289765 35 24.81460890937919 22.6806073451752 22.866470866853078 29.638312878592533 36 24.52441865560345 23.798571256534924 26.786166811759536 24.890843276102085 37 24.21845200872251 26.535543639262254 25.39504524405055 23.850959107964687 38 25.255877110171493 24.040893840583024 23.393484493158194 27.30974455608729 39 26.101764292318347 25.76472660184549 23.079500555255787 25.05400855058038 40 26.052145875132478 24.81201957463181 23.599557992184835 25.536276558050876 41 26.220554396523188 23.696341638352482 22.392505349288918 27.690598615835416 42 23.794655532851667 27.099598998364776 22.76977614980081 26.335969318982748 43 26.035712155384633 23.804282814734325 23.039805382295143 27.120199647585896 44 25.29657133543712 24.52154883285516 22.951093842523697 27.23078598918402 45 26.067397494446908 22.999681062762697 25.729262259911373 25.203659182879022 46 24.94008117553608 26.43399224618126 23.036223331681498 25.589703246601157 47 26.364235561519106 22.838057009975635 24.98760647824923 25.810100950256025 48 23.647922399540583 24.44197555240687 21.547253712955612 30.36284833509694 49 25.125657248518095 25.784970099018118 21.00171678509704 28.087655867366745 50 21.37117620841943 29.151493051335038 25.967586402495847 23.509744337749687 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 90927.0 1 73770.0 2 63617.0 3 63457.0 4 48561.5 5 32432.5 6 19990.0 7 17497.5 8 19896.0 9 21600.5 10 21800.0 11 19525.5 12 17080.0 13 16330.5 14 18151.5 15 20441.0 16 20741.0 17 19942.5 18 20168.0 19 23246.5 20 27023.5 21 30701.5 22 33772.5 23 38849.5 24 45069.0 25 47736.0 26 50190.0 27 55411.5 28 60902.5 29 66889.5 30 74967.5 31 90163.5 32 114597.0 33 134086.0 34 153418.5 35 169124.5 36 170461.0 37 169180.5 38 171942.0 39 190395.0 40 223037.5 41 269036.0 42 306912.5 43 317526.0 44 312847.0 45 300451.5 46 303842.5 47 315317.5 48 332482.0 49 380369.5 50 441185.5 51 466521.5 52 453889.0 53 424137.5 54 410095.5 55 410136.0 56 408120.5 57 415903.0 58 420231.5 59 411924.5 60 405739.0 61 409666.5 62 411545.5 63 407647.0 64 385443.5 65 357684.5 66 338573.0 67 324723.0 68 317757.5 69 304263.0 70 265728.0 71 231745.5 72 222210.5 73 214579.5 74 195006.0 75 166509.0 76 137094.5 77 102223.5 78 79082.0 79 73778.0 80 64027.5 81 45455.0 82 32876.5 83 26652.0 84 20660.0 85 16277.0 86 12236.0 87 8528.0 88 5499.5 89 3649.5 90 2994.5 91 2573.5 92 2060.5 93 1816.0 94 1218.0 95 571.5 96 471.5 97 466.0 98 244.0 99 22.0 100 22.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 48542.0 25 36146.0 26 31693.0 27 31717.0 28 36455.0 29 42746.0 30 41580.0 31 45731.0 32 57919.0 33 44083.0 34 46237.0 35 34950.0 36 32851.0 37 41980.0 38 41464.0 39 37821.0 40 49935.0 41 50260.0 42 69613.0 43 98075.0 44 276122.0 45 594151.0 46 778625.0 47 860102.0 48 1161654.0 49 1200151.0 50 1234050.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.510364490396622 #Duplication Level Percentage of deduplicated Percentage of total 1 78.75509303111939 16.152956635433537 2 9.90735528238186 4.064069359550166 3 3.1311953430577604 1.9266587333024152 4 1.4846206593633133 1.2180044341405807 5 0.8271050728055068 0.848211325754849 6 0.5496166711977126 0.6763702953758136 7 0.38953874481212925 0.5592707147459858 8 0.31747348742030673 0.520919755442227 9 0.2392987830474066 0.44172947361695886 >10 2.425535786487965 11.777611038756856 >50 1.1425201892798726 16.95881108091245 >100 0.7658225104815458 26.787729830474756 >500 0.03755346784690777 4.987502891085007 >1k 0.02525917777797964 9.68795558590138 >5k 0.0013411952802467064 1.6610949785990794 >10k+ 6.705976401233532E-4 1.731103866908008 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 16921 0.2408802256851691 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 10808 0.15385813363307768 No Hit CTAGGCAGGTGCTGGGGGCTTCCGAGACAATC 10029 0.14276861789472023 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8791 0.12514497157368484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.03194463840420303 0.0 0.0 0.0 0.0 2 0.06283584399115515 0.0 0.0 0.0 0.0 3 0.07788285058350924 0.0 0.0 0.0 0.0 4 0.09267361676085638 0.0 0.0 0.0 0.0 5 0.10441796911534278 0.0 0.0 0.0 0.0 6 0.12703830352901418 0.0 0.0 0.0 0.0 7 0.14417794017725857 0.0 0.0 0.0 0.0 8 0.16087627388854653 0.0 0.0 0.0 0.0 9 0.1759232804809006 0.0 0.0 0.0 0.0 10 0.18866412333819194 0.0 0.0 0.0 0.0 11 0.20198862491855468 0.0 0.0 0.0 0.0 12 0.21732034308313877 0.0 0.0 0.0 0.0 13 0.23266629682633433 0.0 0.0 0.0 0.0 14 0.24768483226146545 0.0 0.0 0.0 0.0 15 0.263144670633553 0.0 0.0 0.0 0.0 16 0.27803508586118064 0.0 0.0 0.0 0.0 17 0.29585803028277696 0.0 0.0 0.0 0.0 18 0.3265357021905566 0.0 0.0 0.0 0.0 19 0.34011644418592635 0.0 0.0 0.0 0.0 20 0.3565727730608188 0.0 0.0 0.0 0.0 21 0.3717763710178994 0.0 0.0 0.0 0.0 22 0.3857272380571681 0.0 0.0 0.0 0.0 23 0.40001975898311276 0.0 0.0 0.0 0.0 24 0.41375709234320895 0.0 0.0 0.0 0.0 25 0.4305835462620004 0.0 0.0 0.0 0.0 26 0.45150984682090345 0.0 0.0 0.0 0.0 27 0.46638602646991956 0.0 0.0 0.0 0.0 28 0.4821875187286831 0.0 0.0 0.0 0.0 29 0.4993840976913735 0.0 0.0 0.0 0.0 30 0.5188014269174577 0.0 0.0 0.0 0.0 31 0.5355424673645801 0.0 0.0 0.0 0.0 32 0.5519987962394726 0.0 0.0 0.0 0.0 33 0.5678287596554591 0.0 0.0 0.0 0.0 34 0.5814379728080519 0.0 0.0 0.0 0.0 35 0.5929830270619773 0.0 0.0 0.0 0.0 36 0.6041721918506152 0.0 0.0 0.0 0.0 37 0.6117739908291555 0.0 0.0 0.0 0.0 38 0.6193188474932498 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGGTA 35 1.8339051E-8 163.17178 44 CTATCAT 8275 0.0 157.21675 44 TAAGCCA 4260 0.0 153.09804 44 AGCGTTA 110 0.0 103.836586 44 ACCACTC 1040 0.0 101.040985 44 TTAAGCC 3830 0.0 86.54487 43 CCTATCA 8820 0.0 76.14123 43 ACATTGG 1215 0.0 75.20675 44 ACTTCTA 2130 0.0 72.92936 44 GACGGAT 95 0.0 72.6901 43 TCCTATA 65 1.2187229E-10 70.82625 43 ATTAAGC 4795 0.0 70.2302 42 TGCACCG 1435 0.0 70.17845 43 GTAATCA 25 0.0023483522 69.055595 43 GTATAGT 85 3.6241054E-6 67.188385 44 AACGACA 810 0.0 66.78216 43 TCCTCGA 155 9.094947E-12 66.32143 44 TAAGAGT 265 0.0 64.65298 44 CGCTTAT 160 1.0913936E-11 64.248886 44 CCCTATC 11470 0.0 62.9716 42 >>END_MODULE