##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840960.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6506057 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.43212117569828 39.0 38.0 39.0 35.0 39.0 2 37.83817602581718 39.0 38.0 39.0 35.0 39.0 3 38.06796190073342 39.0 38.0 39.0 35.0 40.0 4 38.72098569071866 39.0 38.0 41.0 35.0 41.0 5 39.37521650978465 41.0 39.0 41.0 35.0 41.0 6 39.36482603825942 41.0 39.0 41.0 35.0 41.0 7 39.355589722008276 41.0 39.0 41.0 35.0 41.0 8 39.29499049885361 40.0 39.0 41.0 35.0 41.0 9 39.193673218663776 40.0 39.0 41.0 35.0 41.0 10 39.12504532315041 40.0 39.0 41.0 35.0 41.0 11 39.00210327084439 40.0 38.0 41.0 35.0 41.0 12 38.97023373757715 40.0 38.0 41.0 35.0 41.0 13 38.8562267437866 40.0 38.0 41.0 35.0 41.0 14 38.83591090579132 40.0 38.0 41.0 35.0 41.0 15 38.8723389604487 40.0 38.0 41.0 35.0 41.0 16 38.815759222521415 40.0 38.0 41.0 35.0 41.0 17 38.82257871395839 40.0 38.0 41.0 35.0 41.0 18 38.85116930269747 40.0 38.0 41.0 35.0 41.0 19 38.93988509476631 40.0 38.0 41.0 35.0 41.0 20 38.878383174325094 40.0 38.0 41.0 35.0 41.0 21 38.85679713534634 40.0 38.0 41.0 35.0 41.0 22 38.80169248440338 40.0 38.0 41.0 35.0 41.0 23 38.722275719379645 40.0 38.0 41.0 35.0 41.0 24 38.533107687190565 40.0 37.0 41.0 35.0 41.0 25 38.488122097536966 40.0 37.0 41.0 35.0 41.0 26 38.41603430192146 40.0 37.0 41.0 34.0 41.0 27 38.36313724916067 40.0 37.0 41.0 34.0 41.0 28 38.2953917377937 40.0 37.0 41.0 34.0 41.0 29 38.1693816669055 40.0 36.0 41.0 34.0 41.0 30 38.07621793111382 40.0 35.0 41.0 34.0 41.0 31 37.968456634064786 40.0 35.0 41.0 33.0 41.0 32 37.85802161760321 40.0 35.0 41.0 33.0 41.0 33 37.73628180734748 39.0 35.0 41.0 33.0 41.0 34 37.674325868646825 39.0 35.0 41.0 33.0 41.0 35 37.507862670066714 39.0 35.0 41.0 33.0 41.0 36 37.45009673783702 39.0 35.0 41.0 33.0 41.0 37 37.38325423777891 39.0 35.0 41.0 33.0 41.0 38 37.30956329354039 39.0 35.0 41.0 33.0 41.0 39 37.22694370899236 38.0 35.0 41.0 33.0 41.0 40 37.15610912157162 38.0 35.0 41.0 33.0 41.0 41 37.05937648819073 38.0 35.0 41.0 33.0 41.0 42 36.97690877703226 37.0 35.0 41.0 33.0 41.0 43 36.87202790047768 37.0 35.0 41.0 33.0 41.0 44 36.72333496614825 37.0 35.0 40.0 33.0 41.0 45 36.55931586319992 37.0 35.0 40.0 32.0 41.0 46 36.296296395012924 37.0 35.0 40.0 31.0 41.0 47 36.13529666624977 36.0 35.0 40.0 31.0 41.0 48 36.149869963034554 36.0 35.0 40.0 31.0 41.0 49 36.237669984667384 36.0 34.0 40.0 31.0 41.0 50 36.35989970285698 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 10.0 20 20.0 21 64.0 22 161.0 23 311.0 24 670.0 25 1374.0 26 2567.0 27 5124.0 28 9864.0 29 19704.0 30 36970.0 31 67369.0 32 114113.0 33 205160.0 34 423226.0 35 325290.0 36 507704.0 37 796183.0 38 985755.0 39 1355499.0 40 1648918.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 45.72843428823325 17.721455560564564 36.55011015120218 2 25.8957307014064 18.38721978611623 31.610989574791613 24.10605993768576 3 24.583876224877834 18.56327111797514 27.414807463260775 29.438045193886254 4 21.72818344505743 19.63355070513523 32.311429180531306 26.326836669276034 5 20.85195380243364 20.505184630260693 30.76815957806702 27.87470198923864 6 23.63635916500578 24.14454715044765 27.495931867796426 24.723161816750146 7 28.272869419988172 20.797404633866563 21.701638949674127 29.228086996471138 8 25.958272422144475 22.222230761273686 24.401061964258844 27.418434852323 9 26.10793296154645 21.413999293273946 26.4264361655608 26.051631579618807 10 28.760999173539364 19.194390703924054 24.32434883370988 27.720261288826702 11 27.399175875649412 20.793731133926432 23.781270283983062 28.02582270644109 12 27.82013745037893 22.210749152674193 23.775306610440087 26.19380678650679 13 28.157730557847866 19.80077948902077 25.763945812340715 26.27754414079065 14 24.77197786616379 23.03024704517652 22.051328477448013 30.146446611211676 15 25.269529609101184 24.050895957413225 23.525677687730067 27.153896745755535 16 26.08955009155315 24.721086827244214 20.997172327263655 28.192190753938984 17 26.195681962208443 26.450167897391612 20.742071580375026 26.61207856002491 18 25.73939945500016 23.743167328537083 20.45195730686036 30.06547590960239 19 28.851514826875942 20.874655724657806 22.64706564974761 27.62676379871864 20 27.759332572708782 21.39048274554004 25.176416376309028 25.673768305442145 21 27.283545164144734 26.798520209706123 19.78949769422555 26.128436931923595 22 30.155084715673407 23.127894514296447 21.18671877605745 25.530301993972692 23 30.587743083099333 23.283195951096033 22.083529240521564 24.04553172528307 24 29.271200667316627 23.12458990137959 22.690486726445833 24.91372270485795 25 28.008540552492466 23.950728151891887 22.232148867981515 25.808582427634136 26 28.97444888535822 25.030658855071746 22.895803336477833 23.0990889230922 27 28.580918051211064 25.336850945169985 20.888543267622374 25.19368773599658 28 27.561589900357504 22.754055210678253 22.133901723941605 27.550453165022642 29 28.34910261535019 25.828610090832072 22.35939947255554 23.462887821262196 30 28.402459801012604 26.14712603430562 20.738193122631994 24.71222104204978 31 28.66744189628597 24.010093546808893 22.195100301088257 25.127364255816882 32 25.894748818970868 24.619835025068404 24.41464709433755 25.070769061623178 33 25.066756732782945 22.38740782966686 24.611730736011992 27.934104701538203 34 28.97530673843062 23.10173305026824 23.62025202467771 24.302708186623427 35 25.318509714291675 23.325853301314385 22.7868575440911 28.568779440302844 36 26.30027804553868 23.9006490786241 25.341153589289828 24.457919286547398 37 24.973010554592385 26.772460466755355 23.051174489191226 25.203354489461038 38 25.930681761213574 23.546017339073206 22.59597351902379 27.92732738068943 39 25.95930094643736 25.20837685702229 24.05250975277435 24.779812443766005 40 25.625114276663048 23.931107162543107 23.172460814406662 27.27131774638718 41 25.033504345094755 24.004816249607373 22.48747808876625 28.474201316531623 42 25.003018938524207 25.220501568997626 22.504477383473226 27.27200210900494 43 25.225252226684663 23.217412064300493 22.83777154459949 28.719564164415353 44 25.826770000524835 24.700652542817654 22.062070292682073 27.41050716397544 45 26.71884467579505 21.88985952013019 26.18641588581842 25.204879918256335 46 25.002511578891255 25.30435210490814 23.398463528799095 26.294672787401513 47 26.106155834661628 23.196015823877236 24.77668598002832 25.92114236143282 48 24.154864629375915 24.25026803170762 21.91550729402921 29.679360044887254 49 24.835583231161078 25.84900853006575 21.6125266649259 27.702881573847275 50 21.64058249494602 26.63415015821547 27.160564589940805 24.564702756897702 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 101299.0 1 78871.5 2 63029.0 3 62691.5 4 47764.5 5 32434.0 6 19577.5 7 15809.0 8 18509.0 9 19914.0 10 20631.5 11 20377.5 12 19036.0 13 17198.0 14 16349.0 15 16554.5 16 16957.5 17 17870.0 18 18917.0 19 19981.5 20 22024.5 21 23884.0 22 24581.5 23 29680.0 24 37355.0 25 42743.0 26 48140.5 27 55152.0 28 60038.0 29 62350.0 30 68378.5 31 80486.0 32 99117.5 33 115162.5 34 130854.0 35 144301.5 36 146751.0 37 149562.0 38 155934.5 39 163285.0 40 172968.5 41 190392.5 42 214961.0 43 233002.5 44 238359.5 45 240822.5 46 252189.5 47 275234.0 48 309821.0 49 360060.5 50 405920.0 51 427571.0 52 436388.0 53 408699.0 54 387357.5 55 404388.5 56 416753.5 57 423642.0 58 428293.5 59 426116.5 60 417944.0 61 406237.5 62 388783.0 63 368846.0 64 346025.0 65 337139.5 66 336176.5 67 320873.5 68 292005.0 69 262050.5 70 236113.5 71 215440.0 72 200866.5 73 187316.5 74 172702.5 75 156344.5 76 137654.5 77 108818.0 78 83219.0 79 67401.0 80 55358.0 81 44635.5 82 34445.0 83 27194.0 84 21479.0 85 17718.5 86 14280.0 87 11164.5 88 6814.0 89 3139.5 90 1895.0 91 1370.0 92 975.0 93 788.0 94 544.5 95 273.0 96 226.5 97 255.0 98 166.0 99 38.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 29661.0 25 31276.0 26 24476.0 27 27388.0 28 28984.0 29 35630.0 30 31153.0 31 39811.0 32 45945.0 33 37417.0 34 37533.0 35 30589.0 36 27892.0 37 34265.0 38 36772.0 39 34917.0 40 50728.0 41 42070.0 42 74058.0 43 89392.0 44 291337.0 45 547353.0 46 743657.0 47 797394.0 48 1122777.0 49 1114448.0 50 1099134.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.80021813130295 #Duplication Level Percentage of deduplicated Percentage of total 1 79.55299006287687 17.34272536368092 2 9.785595856954956 4.266562484527849 3 3.04044337940301 1.9884698666058453 4 1.3465173832905812 1.1741749069330374 5 0.7403881976842585 0.8070312105679542 6 0.49244520053426555 0.6441247673616128 7 0.36249762411481884 0.5531769094447481 8 0.26581924198395396 0.463593396699824 9 0.2031942727625579 0.39867115223297084 >10 2.30903117984449 12.229350529369473 >50 1.1502482490622796 18.21507860785544 >100 0.6989928970081516 25.633575548845368 >500 0.030827847377944282 4.57748286821022 >1k 0.019866834976897424 8.523085821615899 >5k 4.56708850043619E-4 0.6634415523989691 >10k+ 6.850632750654284E-4 2.5194550136498703 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 19851 0.3051156791279265 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 18755 0.28826983839828024 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12004 0.1845049928090086 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7971 0.12251660260584868 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.020427118913959715 0.0 0.0 0.0 0.0 2 0.03682722115714633 0.0 0.0 0.0 0.0 3 0.047832350684907925 0.0 0.0 0.0 0.0 4 0.05949840279604068 0.0 0.0 0.0 0.0 5 0.06955057418033687 0.0 0.0 0.0 0.0 6 0.08678067222589658 0.0 0.0 0.0 0.0 7 0.09930746072467549 0.0 0.0 0.0 0.0 8 0.10986685176597746 0.0 0.0 0.0 0.0 9 0.12127160890228905 0.0 0.0 0.0 0.0 10 0.13209229491841218 0.0 0.0 0.0 0.0 11 0.14260557508180455 0.0 0.0 0.0 0.0 12 0.15468662509412384 0.0 0.0 0.0 0.0 13 0.16555342198815656 0.0 0.0 0.0 0.0 14 0.17534429839763163 0.0 0.0 0.0 0.0 15 0.18842441743132593 0.0 0.0 0.0 0.0 16 0.19922973315481252 0.0 0.0 0.0 0.0 17 0.21349336472152028 0.0 0.0 0.0 0.0 18 0.2407448935661031 0.0 0.0 0.0 0.0 19 0.251473357826407 0.0 0.0 0.0 0.0 20 0.2633699643270878 0.0 0.0 0.0 0.0 21 0.2745441670738513 0.0 0.0 0.0 0.0 22 0.28642540328189564 0.0 0.0 0.0 0.0 23 0.29832200978257645 0.0 0.0 0.0 0.0 24 0.3103569489169861 0.0 0.0 0.0 0.0 25 0.3232218838537689 0.0 0.0 0.0 0.0 26 0.3390532852694036 0.0 0.0 0.0 0.0 27 0.35104211352590364 0.0 0.0 0.0 0.0 28 0.36384556729214024 0.0 0.0 0.0 0.0 29 0.3780784582735749 0.0 0.0 0.0 0.0 30 0.39269560657092306 0.0 0.0 0.0 0.0 31 0.4062675749689866 0.0 0.0 0.0 0.0 32 0.4195475078069559 0.0 0.0 0.0 0.0 33 0.4337803987883906 0.0 0.0 0.0 0.0 34 0.4480747709403714 0.0 0.0 0.0 0.0 35 0.45878786490803874 0.0 0.0 0.0 0.0 36 0.46923966390088495 0.0 0.0 0.0 0.0 37 0.4767864775854254 0.0 0.0 0.0 0.0 38 0.48259644820203695 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGTA 15 1.7975353E-5 234.89073 44 CTATCAT 7815 0.0 175.07849 44 ACCGTAA 45 0.0 117.60919 43 CGTGTGC 575 0.0 106.21145 44 TAATATC 20 8.888249E-4 88.20689 43 ACTTCTA 2195 0.0 87.74961 44 CCTATCA 7980 0.0 85.9225 43 CGCGTAA 235 0.0 84.960464 44 CGTTCGA 535 0.0 82.43635 43 GTGTTAG 1460 0.0 76.52653 43 TCTACGA 295 0.0 75.64277 44 TAAGCCA 2475 0.0 71.17901 44 TACGCTA 745 0.0 68.22383 42 TCCTATA 190 0.0 67.99468 44 CCCTATC 10720 0.0 65.75821 42 GGTGCGT 665 0.0 65.345535 44 TGAACAC 1220 0.0 65.070656 43 GAACACA 2420 0.0 61.634544 44 ACATTGG 845 0.0 61.154984 44 TCGTGCG 1555 0.0 60.12817 43 >>END_MODULE