##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840957.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3438936 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.076336983299484 39.0 37.0 39.0 33.0 39.0 2 37.623913908255346 39.0 37.0 39.0 35.0 39.0 3 38.07405546366667 39.0 38.0 39.0 35.0 41.0 4 38.74678999551024 40.0 38.0 41.0 35.0 41.0 5 39.1097851195835 40.0 38.0 41.0 35.0 41.0 6 39.115536607834514 40.0 38.0 41.0 35.0 41.0 7 39.069184189528386 40.0 38.0 41.0 35.0 41.0 8 38.971471408598475 40.0 38.0 41.0 35.0 41.0 9 38.83306551793927 40.0 38.0 41.0 35.0 41.0 10 38.7566232695229 40.0 38.0 41.0 35.0 41.0 11 38.62940426922746 40.0 38.0 41.0 35.0 41.0 12 38.554404908960215 40.0 38.0 41.0 35.0 41.0 13 38.47945032998579 40.0 37.0 41.0 35.0 41.0 14 38.43769962569818 40.0 37.0 41.0 34.0 41.0 15 38.43700551565949 40.0 37.0 41.0 34.0 41.0 16 38.388566986998306 40.0 37.0 41.0 34.0 41.0 17 38.37090512879565 40.0 37.0 41.0 34.0 41.0 18 38.430663146973366 40.0 37.0 41.0 35.0 41.0 19 38.49385682083063 40.0 37.0 41.0 35.0 41.0 20 38.397682597175404 40.0 37.0 41.0 35.0 41.0 21 38.327942712513405 40.0 36.0 41.0 34.0 41.0 22 38.166572451479176 40.0 36.0 41.0 34.0 41.0 23 38.05759077807787 40.0 35.0 41.0 34.0 41.0 24 37.796632155992434 39.0 35.0 41.0 33.0 41.0 25 37.7209118673673 39.0 35.0 41.0 33.0 41.0 26 37.62539523641295 39.0 35.0 41.0 33.0 41.0 27 37.522567896424654 39.0 35.0 41.0 33.0 41.0 28 37.37234358864794 39.0 35.0 41.0 33.0 41.0 29 37.21830718485724 39.0 35.0 41.0 33.0 41.0 30 37.09806376491489 38.0 35.0 41.0 33.0 41.0 31 36.91139826288291 38.0 35.0 41.0 33.0 41.0 32 36.78044762162936 37.0 35.0 40.0 33.0 41.0 33 36.65751291654373 37.0 35.0 40.0 32.0 41.0 34 36.58067396873834 37.0 35.0 40.0 32.0 41.0 35 36.41852224763288 37.0 35.0 40.0 32.0 41.0 36 36.321376736666274 36.0 35.0 40.0 32.0 41.0 37 36.26418482156673 36.0 35.0 40.0 32.0 41.0 38 36.20228355976964 36.0 35.0 40.0 32.0 41.0 39 36.080708914897286 35.0 35.0 40.0 32.0 41.0 40 35.972216855165925 35.0 35.0 39.0 32.0 41.0 41 35.882320836662394 35.0 35.0 39.0 32.0 41.0 42 35.79720043256134 35.0 35.0 39.0 32.0 41.0 43 35.68346391791046 35.0 35.0 39.0 32.0 41.0 44 35.44793184946024 35.0 34.0 39.0 31.0 41.0 45 35.29038251122078 35.0 34.0 39.0 31.0 41.0 46 35.01968825576027 35.0 34.0 38.0 30.0 41.0 47 34.976501599986406 35.0 34.0 38.0 30.0 40.0 48 35.00678663168826 35.0 34.0 38.0 30.0 40.0 49 35.08084675340567 35.0 34.0 38.0 30.0 40.0 50 36.05078348068737 37.0 34.0 39.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 8.0 21 36.0 22 115.0 23 199.0 24 497.0 25 1094.0 26 2164.0 27 4435.0 28 8982.0 29 16729.0 30 30433.0 31 52866.0 32 87772.0 33 154070.0 34 312527.0 35 234116.0 36 358404.0 37 520430.0 38 552093.0 39 572652.0 40 529313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 40.795205261162174 17.108111346067503 42.09668339277032 2 28.736417310470447 17.56790472401929 27.64346297808392 26.052214987426343 3 24.94445956540046 17.39901527681818 27.188409438268113 30.468115719513243 4 21.65815240527884 18.177511881581978 32.82963102541018 27.334704687728994 5 24.33607371582373 20.171413483705425 29.87996868798954 25.6125441124813 6 24.505835525871955 21.292138033391726 26.710761700712084 27.491264740024242 7 30.565558649535784 19.273839350310677 21.63299927652041 28.527602723633123 8 29.96141829914834 19.264243358992434 22.4725903593437 28.301747982515522 9 29.064774686123844 18.624975864627896 25.54883254588047 26.761416903367785 10 32.12874563527789 16.130337988261488 23.32704068932949 28.413875687131135 11 31.27292860349829 17.324195623297438 22.25563371926666 29.14724205393761 12 29.53762442802076 18.492900129574963 22.437783081743888 29.53169236066039 13 29.540386910369953 17.53289389508848 26.261204046833093 26.66551514770848 14 26.885874002889267 20.764562062219245 21.196759695440683 31.152804239450806 15 26.83042080457444 22.09453738016642 22.635693132992298 28.43934868226684 16 28.36769861375728 20.8780273898671 20.817747117131578 29.936526879244045 17 29.13188846782842 22.345487092519313 18.54713201990383 29.975492419748434 18 26.71262274145259 19.650351155124724 19.401088010942917 34.23593809247977 19 30.661634877764516 17.506664852151946 22.227543635589615 29.604156634493922 20 30.66032633349385 17.84665373243352 23.37804483712404 28.11497509694859 21 31.509193541258114 22.531591166570124 18.43119499752249 27.528020294649274 22 32.120138321853034 19.977836167931013 21.71421625758665 26.1878092526293 23 32.98630739275171 20.875381222564187 20.12288103064436 26.015430354039736 24 32.06326026422126 21.022025417163913 22.654914194390358 24.25980012422447 25 31.248555866822116 21.649099182627936 21.221284782770198 25.881060167779758 26 30.9934122855848 22.952632763871556 21.383796232887782 24.670158717655863 27 30.073714642428644 21.82496498738956 21.969767404108246 26.131552966073556 28 30.924996142387446 20.83051430877518 20.407126494083016 27.83736305475436 29 32.06049872278021 22.358341663676097 20.41332222422091 25.167837389322784 30 31.958562408469977 22.865880008642836 20.01917628982306 25.156381293064122 31 29.9177385740043 22.533494742855588 21.59332961547355 25.95543706766656 32 28.95946855592072 20.392095348036783 23.017364527143304 27.63107156889919 33 27.72556532665249 19.226936435498505 23.999127462204132 29.048370775644873 34 30.04407519555579 20.6856878320978 24.132842837718748 25.137394134627662 35 27.73926670085253 20.18986875874141 21.965006905793004 30.10585763461306 36 27.631073134467464 20.33987554905061 25.31267288994636 26.71637842653556 37 27.360715943575865 22.77889179058524 24.35089192952983 25.509500336309067 38 28.582105698558657 21.07671259028286 23.02236787680168 27.318813834356803 39 28.499938178633638 22.378629923206972 21.509607296586882 27.611824601572504 40 28.492391915460637 21.421693967690356 22.159326415260487 27.926587701588517 41 28.55284547553687 20.638236591124702 22.338443413496663 28.470474519841765 42 26.321534634125204 22.552184113022737 22.00783836861081 29.11844288424125 43 28.596140000526404 20.212673450601248 22.028263839816255 29.162922709056094 44 27.529112535221806 22.61317518349155 21.537554495803445 28.320157785483204 45 28.699878674199287 19.580942172997194 24.832302436192304 26.886876716611212 46 28.22229596100784 21.853912646870793 22.479169148944802 27.444622243176564 47 27.441324818614127 21.623688760539746 23.51853826189921 27.41644815894692 48 25.69874842870416 21.910285839208612 20.93628736951413 31.4546783625731 49 25.746597157622446 23.02296359159773 21.5582655673028 29.67217368347702 50 22.959284924527463 29.442592675093454 27.36451595919177 20.23360644118731 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 35190.0 1 27593.5 2 24721.5 3 25538.0 4 18207.5 5 10953.0 6 5336.0 7 4714.0 8 6540.5 9 7291.5 10 7527.0 11 7913.5 12 7758.0 13 6983.5 14 7167.5 15 7915.5 16 7787.0 17 6924.0 18 6322.5 19 6031.5 20 5058.0 21 4226.0 22 4620.0 23 6687.0 24 8898.0 25 10723.0 26 13138.5 27 14739.5 28 14806.0 29 16242.0 30 19696.0 31 24005.5 32 30721.5 33 36894.0 34 40967.5 35 42213.0 36 44622.0 37 50649.5 38 55373.5 39 62577.5 40 71486.0 41 81588.5 42 97844.5 43 106058.5 44 105180.5 45 106307.5 46 111910.0 47 124543.5 48 139208.5 49 158341.0 50 190391.5 51 212345.5 52 214806.5 53 217951.0 54 220267.0 55 222010.0 56 230015.5 57 240356.0 58 245176.5 59 249522.0 60 257890.0 61 257436.5 62 245235.0 63 231516.0 64 218055.5 65 209721.0 66 206423.5 67 203927.5 68 202046.0 69 199747.0 70 187341.5 71 170609.0 72 154201.5 73 138314.0 74 123732.0 75 108284.0 76 91342.5 77 72745.0 78 61040.0 79 50174.5 80 37700.0 81 29288.5 82 25940.0 83 23463.5 84 20029.0 85 15370.0 86 11206.5 87 8477.5 88 5368.5 89 2573.5 90 1337.0 91 1076.5 92 983.5 93 887.5 94 783.5 95 523.5 96 314.5 97 293.0 98 146.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 19930.0 25 16612.0 26 14329.0 27 18105.0 28 17757.0 29 19963.0 30 23885.0 31 25225.0 32 32841.0 33 23077.0 34 21208.0 35 19367.0 36 19907.0 37 23830.0 38 21002.0 39 21709.0 40 27504.0 41 26643.0 42 44539.0 43 73984.0 44 240539.0 45 345381.0 46 400020.0 47 477819.0 48 581189.0 49 635660.0 50 246911.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.68160344140275 #Duplication Level Percentage of deduplicated Percentage of total 1 71.72873783367916 9.096354085590612 2 11.002275768355114 2.7905299649446857 3 4.148089287433857 1.5781327014830124 4 2.0431717579988016 1.0364277599045804 5 1.2660953501594967 0.8028059574863347 6 0.906116329109893 0.6894604774530747 7 0.6635296559753667 0.5890233978082996 8 0.5072943150164497 0.5146644264893326 9 0.4399979119765508 0.5021891131258666 >10 3.68885487123489 10.288304319314042 >50 1.6136857167754042 15.092913188439686 >100 1.8828953265235007 41.09864581547368 >500 0.07270624825857805 6.199692038291885 >1k 0.03497760051358619 8.231202229161273 >5k 0.0011790202420309953 0.9631494428142314 >10k+ 3.9300674734366514E-4 0.5265050822193812 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 10564 0.30718803723012 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7900 0.22972221640646992 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 6380 0.18552249881940228 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGT 5045 0.1467023521228659 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 4572 0.13294809790004813 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4468 0.12992390669672246 No Hit TTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3601 0.10471262041515167 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.026985090737367604 0.0 0.0 0.0 0.0 2 0.04498484414946949 0.0 0.0 0.0 0.0 3 0.05481346556027795 0.0 0.0 0.0 0.0 4 0.06621234009589012 0.0 0.0 0.0 0.0 5 0.07807647481662933 0.0 0.0 0.0 0.0 6 0.09395347863408915 0.0 0.0 0.0 0.0 7 0.10657366115565978 0.0 0.0 0.0 0.0 8 0.11747819674457448 0.0 0.0 0.0 0.0 9 0.12835365357191875 0.0 0.0 0.0 0.0 10 0.13815319622115677 0.0 0.0 0.0 0.0 11 0.1474293211621269 0.0 0.0 0.0 0.0 12 0.15629834344111085 0.0 0.0 0.0 0.0 13 0.1658361772362149 0.0 0.0 0.0 0.0 14 0.17511230217718504 0.0 0.0 0.0 0.0 15 0.18610407405081106 0.0 0.0 0.0 5.8157523140878455E-5 16 0.1950894113760768 0.0 0.0 0.0 5.8157523140878455E-5 17 0.2085819567447606 0.0 0.0 0.0 5.8157523140878455E-5 18 0.2305945792535831 0.0 0.0 0.0 5.8157523140878455E-5 19 0.24042320066439155 0.0 0.0 0.0 5.8157523140878455E-5 20 0.25156036634586976 0.0 0.0 0.0 5.8157523140878455E-5 21 0.265081990476124 0.0 0.0 0.0 5.8157523140878455E-5 22 0.27496876941007337 0.0 0.0 0.0 5.8157523140878455E-5 23 0.28767618821635527 0.0 0.0 0.0 5.8157523140878455E-5 24 0.2999765043606511 0.0 0.0 0.0 5.8157523140878455E-5 25 0.3137307585834688 0.0 0.0 0.0 5.8157523140878455E-5 26 0.32600199596619417 0.0 0.0 0.0 5.8157523140878455E-5 27 0.33792428821007425 0.0 0.0 0.0 5.8157523140878455E-5 28 0.3494976353151091 0.0 0.0 0.0 5.8157523140878455E-5 29 0.3632809682994973 0.0 0.0 0.0 5.8157523140878455E-5 30 0.3784310030776961 0.0 0.0 0.0 5.8157523140878455E-5 31 0.3904405316062875 0.0 0.0 0.0 5.8157523140878455E-5 32 0.4044274159216688 0.0 0.0 0.0 5.8157523140878455E-5 33 0.41608799931141494 0.0 0.0 0.0 5.8157523140878455E-5 34 0.4264691171920617 0.0 0.0 0.0 5.8157523140878455E-5 35 0.4350473518553413 0.0 0.0 0.0 5.8157523140878455E-5 36 0.44356742899548 0.0 0.0 0.0 5.8157523140878455E-5 37 0.45153500966578036 0.0 0.0 0.0 5.8157523140878455E-5 38 0.4561585327554802 0.0 0.0 0.0 5.8157523140878455E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGATG 20 2.7903297E-9 548.6557 44 CTATCAT 2225 0.0 453.71976 44 ATGCGGT 25 4.668733E-6 329.19342 44 AATCGCA 95 0.0 288.76614 44 GTTAACA 55 1.4479156E-9 249.38893 44 GGTCAAT 110 0.0 224.45003 44 TCCCGTA 290 0.0 208.11078 44 AATACCT 140 0.0 195.94846 44 TATAATT 105 1.8189894E-12 182.88522 44 CCCATAC 215 0.0 165.87265 44 GCACGAA 90 2.7504939E-8 152.40436 44 AACGACA 315 0.0 146.59271 43 GTATAGG 115 0.0 143.12756 44 ACCTGTT 135 1.2732926E-11 142.24408 44 CGCATTG 60 1.5332643E-4 137.16393 44 ACAAGTG 140 1.8189894E-11 137.16393 44 TCGCAAA 365 0.0 128.62006 43 CACGAAC 65 1.3442332E-9 126.612854 44 TACTATA 240 0.0 125.733604 44 ATCCCTA 265 0.0 124.22393 44 >>END_MODULE