##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840956.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7190994 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.53672844115848 39.0 38.0 39.0 35.0 39.0 2 37.911863784061005 39.0 38.0 39.0 35.0 39.0 3 38.04793885240343 39.0 38.0 39.0 35.0 39.0 4 38.56309002621891 39.0 38.0 41.0 35.0 41.0 5 39.32154706289562 41.0 39.0 41.0 35.0 41.0 6 39.290891078479554 40.0 39.0 41.0 35.0 41.0 7 39.28030074840836 40.0 39.0 41.0 35.0 41.0 8 39.21841208600647 40.0 39.0 41.0 35.0 41.0 9 39.106373333088584 40.0 38.0 41.0 35.0 41.0 10 39.011030463938646 40.0 38.0 41.0 35.0 41.0 11 38.81508036302075 40.0 38.0 41.0 35.0 41.0 12 38.828325958831286 40.0 38.0 41.0 35.0 41.0 13 38.67127924178493 40.0 38.0 41.0 35.0 41.0 14 38.62779832662911 40.0 38.0 41.0 35.0 41.0 15 38.592175991246826 40.0 38.0 41.0 35.0 41.0 16 38.5184299972994 40.0 38.0 41.0 35.0 41.0 17 38.49795758416708 40.0 37.0 41.0 35.0 41.0 18 38.516050493158524 40.0 37.0 41.0 35.0 41.0 19 38.57807710589106 40.0 37.0 41.0 35.0 41.0 20 38.53896304182704 40.0 37.0 41.0 35.0 41.0 21 38.47414974897768 40.0 37.0 41.0 35.0 41.0 22 38.37288433281964 40.0 37.0 41.0 34.0 41.0 23 38.20673400645307 40.0 36.0 41.0 34.0 41.0 24 37.994206503301214 40.0 35.0 41.0 33.0 41.0 25 37.90396394095407 40.0 35.0 41.0 33.0 41.0 26 37.81886601269833 39.0 35.0 41.0 33.0 41.0 27 37.720745455160014 39.0 35.0 41.0 33.0 41.0 28 37.56568379990001 39.0 35.0 41.0 33.0 41.0 29 37.41297139231268 39.0 35.0 41.0 33.0 41.0 30 37.31270357265053 39.0 35.0 41.0 33.0 41.0 31 37.134718523369045 38.0 35.0 41.0 33.0 41.0 32 37.024329172231546 38.0 35.0 41.0 33.0 41.0 33 36.87720351113847 37.0 35.0 40.0 33.0 41.0 34 36.741562402295415 37.0 35.0 40.0 33.0 41.0 35 36.560931317055875 37.0 35.0 40.0 32.0 41.0 36 36.48063249521662 37.0 35.0 40.0 33.0 41.0 37 36.37452635147205 36.0 35.0 40.0 33.0 41.0 38 36.297521594361235 36.0 35.0 40.0 33.0 41.0 39 36.19505020772815 35.0 35.0 40.0 33.0 41.0 40 36.10624728388257 35.0 35.0 40.0 32.0 41.0 41 35.97878679242563 35.0 35.0 39.0 32.0 41.0 42 35.88122196047834 35.0 35.0 39.0 32.0 41.0 43 35.751851863689026 35.0 35.0 39.0 32.0 41.0 44 35.585891744081245 35.0 35.0 39.0 31.0 41.0 45 35.38914104453635 35.0 34.0 39.0 31.0 41.0 46 35.1336935674729 35.0 34.0 38.0 31.0 41.0 47 34.94399289756169 35.0 34.0 38.0 30.0 40.0 48 34.92449848057858 35.0 34.0 38.0 30.0 40.0 49 34.98630045772713 35.0 34.0 38.0 30.0 40.0 50 35.09260107814604 35.0 34.0 38.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 16.0 21 49.0 22 132.0 23 322.0 24 823.0 25 1799.0 26 3833.0 27 7809.0 28 15550.0 29 29949.0 30 55413.0 31 96454.0 32 158069.0 33 265672.0 34 500705.0 35 515293.0 36 811115.0 37 1179936.0 38 1260701.0 39 1200643.0 40 1086709.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 39.82922249691767 19.144641199811876 41.02613630327045 2 26.220950817091488 20.61553660036429 30.81763105350943 22.345881529034788 3 25.105402674512035 17.335447644651072 30.04243919547145 27.516710485365444 4 21.521822991369483 20.097318952011364 32.911249821651914 25.46960823496724 5 23.00567904798697 18.65342955368896 30.180528588954463 28.16036280936961 6 23.60170235158032 22.00338367686025 28.64930773130947 25.74560624024996 7 29.823262263881738 18.487903063192654 22.19060396935389 29.498230703571714 8 25.61684796288246 20.052332125433566 23.416262063353134 30.914557848330844 9 27.795461934747824 20.83526978328726 24.882262452172814 26.4870058297921 10 30.219883370782952 16.90354629693753 23.48949255137746 29.387077780902054 11 27.886297777469988 20.573289311602817 24.37365404560204 27.166758865325157 12 30.813389637093287 19.343195113220787 23.06181871379673 26.781596535889197 13 29.812512706866396 19.885081255804135 23.34312891931213 26.959277118017344 14 26.133772326885545 20.262275284891075 21.32481267541038 32.279139712813 15 26.486296609342187 22.16977235692312 23.20964250561188 28.134288528122813 16 28.184518023516635 22.123144588912186 20.84930122316887 28.843036164402307 17 27.809771500296065 23.618334266444947 18.833070921766865 29.738823311492123 18 26.213872518875693 21.42182290793178 20.40774891482318 31.956555658369346 19 29.755343976090092 21.650539549886982 20.955447883839145 27.63866859018378 20 28.130895394989903 20.83695244357039 22.28570904105886 28.746443120380853 21 27.67795384059561 25.931380279277107 19.399153997347238 26.991511882780046 22 31.237280965607816 22.305525494806417 21.48683478250712 24.970358757078646 23 31.610052796595294 23.32406340486447 20.43646538990298 24.62941840863725 24 30.49679919076556 23.249609163906964 22.16541969024032 24.088171955087155 25 30.551445525723008 25.197245218530306 19.136210119023506 25.115099136723178 26 30.273935678530954 26.369925359548517 20.79747726846148 22.558661693459047 27 29.707970792818696 25.95298697027047 19.689269652884235 24.649772584026604 28 28.672840190512837 23.768987090530793 20.802362599517497 26.755810119438877 29 29.610532964679376 25.963805801815866 20.532080867225897 23.89358036627886 30 29.76361273488174 26.118842333667736 19.1828254747032 24.934719456747327 31 27.431792367205567 26.181487339827708 21.217206996698977 25.169513296267752 32 28.05678049223156 24.367857543768466 23.728032532196757 23.847329431803217 33 26.2313059913442 23.334365519760375 23.409661116298473 27.02466737259695 34 28.08929082167713 24.453426801464882 23.102067157744536 24.35521521911345 35 26.17982749501067 23.475503290332735 21.18342813407887 29.16124108057772 36 26.62779811564003 23.89964010526019 25.25331682716409 24.21924495193569 37 24.19207678608554 26.495860548118422 23.26765813535358 26.044404530442456 38 26.562065387638366 24.600841267617884 21.586490746194283 27.250602598549467 39 27.484608653138398 26.02236311915849 21.47464975079573 25.018378476907383 40 26.610681931084667 25.325883559316896 21.805080140526766 26.258354369071675 41 26.508972829871286 25.233980491858865 20.41402623188778 27.843020446382067 42 24.143259103540807 27.370711201909824 20.841685139221333 27.644344555328033 43 26.40655187567416 24.38729575326595 21.78906156366106 27.417090807398825 44 25.92061345302324 25.776526619985525 21.47137586511418 26.831484061877052 45 26.2960998604361 24.353951732309298 23.75433693547592 25.595611471778685 46 24.811530269323615 26.690945235953993 21.559861788233068 26.937662706489323 47 25.55280279390019 23.650689984071867 23.84328634545943 26.95322087656851 48 23.86775860856035 25.46166823229836 19.822580133444237 30.84799302569705 49 25.98076361385886 25.747998848022746 19.167716858696917 29.10352067942148 50 23.312523165126496 27.929987754738196 23.143310224246243 25.614178855889065 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 169279.0 1 145981.5 2 92136.5 3 55575.5 4 43521.5 5 28586.0 6 14747.5 7 10530.0 8 12001.5 9 14462.5 10 16227.5 11 16146.5 12 15669.0 13 14273.5 14 13332.5 15 14311.5 16 15678.5 17 16883.5 18 19488.5 19 23489.5 20 27537.5 21 33858.0 22 41627.0 23 48867.0 24 53920.0 25 57290.5 26 60468.0 27 62102.0 28 61779.0 29 61936.5 30 66485.5 31 78895.5 32 99661.0 33 109915.5 34 112478.0 35 118164.0 36 120261.0 37 123036.0 38 125141.5 39 136998.5 40 163822.0 41 200089.5 42 232350.5 43 256275.0 44 261505.5 45 243030.5 46 240062.5 47 254510.5 48 284913.5 49 345363.0 50 402571.0 51 434422.0 52 450022.0 53 442606.0 54 437867.0 55 445067.0 56 456710.5 57 479965.5 58 495020.0 59 476208.5 60 454534.0 61 474064.0 62 487239.5 63 470653.0 64 442538.5 65 418175.0 66 403511.0 67 390624.5 68 391164.0 69 377414.0 70 327241.5 71 281881.0 72 251632.5 73 224444.5 74 205065.5 75 185643.5 76 159253.0 77 123903.0 78 97175.0 79 87126.0 80 74891.0 81 54734.0 82 40108.0 83 33100.0 84 27813.5 85 24077.5 86 18937.5 87 13522.0 88 7912.0 89 4150.0 90 2409.0 91 1248.0 92 934.5 93 815.5 94 789.0 95 792.0 96 777.0 97 725.5 98 420.0 99 114.5 100 114.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 57361.0 25 47663.0 26 44688.0 27 50677.0 28 54742.0 29 52878.0 30 47533.0 31 47346.0 32 61285.0 33 45328.0 34 49337.0 35 37450.0 36 33934.0 37 42751.0 38 44416.0 39 42090.0 40 49359.0 41 50691.0 42 73715.0 43 104516.0 44 270624.0 45 600860.0 46 812299.0 47 844716.0 48 1176770.0 49 1169103.0 50 1278862.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.998896492324665 #Duplication Level Percentage of deduplicated Percentage of total 1 76.30090916507469 14.496330754975203 2 10.510985752517696 3.9939426068876593 3 3.642603590150982 2.0761634571554612 4 1.7177547133439366 1.3054177599209709 5 1.08476978174709 1.030471440070729 6 0.7177970469224948 0.8182411078186073 7 0.5308003883507172 0.7059235145452708 8 0.38126053064595244 0.579482348668098 9 0.3290246045730675 0.5625993965140585 >10 2.799816458111366 12.150226283360412 >50 1.1328443751392636 15.632715053254234 >100 0.7714994281732983 25.59297766102525 >500 0.05321459877562244 7.091208053059836 >1k 0.023127019721051103 7.998693277825172 >5k 0.0026944100645884777 3.7729339171318306 >10k+ 8.981366881961592E-4 2.192673367787256 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 16657 0.231636961454842 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 11976 0.16654164917951536 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 11783 0.16385773649651217 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 10984 0.15274661611454549 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 9634 0.13397313361685464 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9619 0.1337645393668803 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 9303 0.12937015383408745 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC 8387 0.11663199830232093 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 7260 0.10095961698758198 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.027729128963255984 0.0 0.0 0.0 0.0 2 0.059157329292723645 0.0 0.0 0.0 0.0 3 0.07598393212398731 0.0 0.0 0.0 0.0 4 0.09669038800477375 0.0 0.0 0.0 0.0 5 0.11748028158554992 0.0 0.0 0.0 0.0 6 0.14694769596525878 0.0 0.0 0.0 0.0 7 0.1665416491795154 0.0 0.0 0.0 0.0 8 0.18612169611044035 0.0 0.0 0.0 0.0 9 0.20472830320815175 0.0 0.0 0.0 0.0 10 0.222639596139282 0.0 0.0 0.0 0.0 11 0.24132964093698311 0.0 0.0 0.0 0.0 12 0.2600474983013475 0.0 0.0 0.0 0.0 13 0.27873754309904863 0.0 0.0 0.0 0.0 14 0.2939232044971808 0.0 0.0 0.0 0.0 15 0.3120709042449486 0.0 0.0 0.0 0.0 16 0.3274095347597286 0.0 0.0 0.0 0.0 17 0.3462525486740776 0.0 0.0 0.0 0.0 18 0.3763874646537043 0.0 0.0 0.0 0.0 19 0.3955642293680123 0.0 0.0 0.0 0.0 20 0.4127523955658981 0.0 0.0 0.0 0.0 21 0.43055243823037537 0.0 0.0 0.0 0.0 22 0.4456685682118494 0.0 0.0 0.0 0.0 23 0.46191110714318495 0.0 0.0 0.0 0.0 24 0.47726364394129656 0.0 0.0 0.0 0.0 25 0.49543915625572765 0.0 0.0 0.0 0.0 26 0.5212770306858829 0.0 0.0 0.0 0.0 27 0.5388545728170542 0.0 0.0 0.0 0.0 28 0.5582399317813365 0.0 0.0 0.0 0.0 29 0.5769995079956958 0.0 0.0 0.0 0.0 30 0.5968298680265899 0.0 0.0 0.0 0.0 31 0.6163403835408569 0.0 0.0 0.0 0.0 32 0.6361568372884194 0.0 0.0 0.0 0.0 33 0.6551111014694213 0.0 0.0 0.0 0.0 34 0.6720489545673379 0.0 0.0 0.0 0.0 35 0.6868591463155164 0.0 0.0 0.0 0.0 36 0.6993887075973085 0.0 0.0 0.0 0.0 37 0.7084973231795215 0.0 0.0 0.0 0.0 38 0.716479529811873 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCAT 6710 0.0 178.13292 44 TAAGCCA 4245 0.0 146.66827 44 ACCACTC 600 0.0 146.12578 44 ACATTGG 1295 0.0 117.40912 44 GTTCGAA 120 0.0 110.98161 44 ACGAACA 170 0.0 110.9816 44 TTAAGCC 3120 0.0 105.068924 43 AATCGCA 860 0.0 103.2387 44 ACTTCTA 2645 0.0 101.12123 44 GTGTTAG 2420 0.0 92.46878 43 CGGTCTA 185 0.0 89.98509 44 TAGATTA 35 1.0300628E-6 83.03319 43 CCTATCA 7540 0.0 83.02217 43 GGATATC 55 3.9147766E-5 80.7139 44 AAATTCC 140 0.0 79.272575 44 TATTCGT 15 0.0014148144 78.464096 42 AGGTACT 310 0.0 75.18108 44 GATTCAA 45 0.0017859846 73.98774 44 TGCACCG 1195 0.0 72.95803 43 TAACGAA 60 0.0 71.92542 42 >>END_MODULE