##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840953.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6416901 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.01640012834856 39.0 37.0 39.0 33.0 39.0 2 37.641438600969536 39.0 37.0 39.0 35.0 39.0 3 37.77945880729654 39.0 37.0 39.0 35.0 40.0 4 38.2622261119503 39.0 38.0 40.0 35.0 41.0 5 38.84050992839067 40.0 38.0 41.0 35.0 41.0 6 38.823234455385865 40.0 38.0 41.0 35.0 41.0 7 38.7706889976953 40.0 38.0 41.0 35.0 41.0 8 38.66237347280253 40.0 38.0 41.0 35.0 41.0 9 38.48820201527186 40.0 38.0 41.0 35.0 41.0 10 38.377997104833 40.0 38.0 41.0 34.0 41.0 11 38.247359434094435 40.0 37.0 41.0 34.0 41.0 12 38.17391260984079 40.0 37.0 41.0 34.0 41.0 13 38.00714051845276 39.0 37.0 41.0 33.0 41.0 14 37.975631071758784 39.0 37.0 41.0 33.0 41.0 15 37.92473719011716 39.0 37.0 40.0 33.0 41.0 16 37.882378581187396 39.0 36.0 40.0 33.0 41.0 17 37.935597105207016 39.0 36.0 41.0 33.0 41.0 18 38.01561719590188 39.0 36.0 41.0 33.0 41.0 19 38.11495439932765 40.0 36.0 41.0 34.0 41.0 20 38.05850565561164 40.0 36.0 41.0 34.0 41.0 21 38.029198673939334 40.0 36.0 41.0 34.0 41.0 22 37.839899664962886 39.0 35.0 41.0 33.0 41.0 23 37.709837349836 39.0 35.0 41.0 33.0 41.0 24 37.46882490473205 39.0 35.0 41.0 33.0 41.0 25 37.34995664889182 39.0 35.0 41.0 33.0 41.0 26 37.236221340771145 39.0 35.0 41.0 33.0 41.0 27 37.127760561168486 38.0 35.0 41.0 33.0 41.0 28 37.019995221054955 38.0 35.0 40.0 33.0 41.0 29 36.87928008511695 38.0 35.0 40.0 33.0 41.0 30 36.760718860259416 38.0 35.0 40.0 32.0 41.0 31 36.56327746542118 37.0 35.0 40.0 32.0 41.0 32 36.385883140661655 37.0 35.0 40.0 31.0 41.0 33 36.29233216005231 37.0 35.0 40.0 31.0 41.0 34 36.228642731901225 36.0 35.0 40.0 32.0 41.0 35 36.07336039987113 36.0 34.0 40.0 31.0 41.0 36 35.97462569903665 36.0 34.0 40.0 31.0 41.0 37 35.91857519958289 35.0 34.0 40.0 31.0 41.0 38 35.867148274965956 35.0 34.0 40.0 31.0 41.0 39 35.79540636746807 35.0 34.0 39.0 31.0 41.0 40 35.7388807571434 35.0 34.0 39.0 31.0 41.0 41 35.66539871407883 35.0 34.0 39.0 31.0 41.0 42 35.55289293024693 35.0 34.0 39.0 31.0 41.0 43 35.41618999099739 35.0 34.0 39.0 31.0 41.0 44 35.22300231554515 35.0 34.0 39.0 31.0 41.0 45 35.100341218444846 35.0 34.0 39.0 30.0 41.0 46 34.810347313232946 35.0 33.0 38.0 30.0 40.0 47 34.65980340327665 35.0 33.0 37.0 30.0 40.0 48 34.665106679177576 35.0 33.0 37.0 29.0 40.0 49 34.6683260330641 35.0 33.0 37.0 30.0 40.0 50 35.07874651101247 35.0 34.0 38.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 11.0 21 54.0 22 139.0 23 307.0 24 818.0 25 1863.0 26 3987.0 27 9004.0 28 19219.0 29 37916.0 30 69807.0 31 121201.0 32 199688.0 33 332805.0 34 547113.0 35 588878.0 36 845013.0 37 1014842.0 38 963478.0 39 1013333.0 40 647421.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 44.46926951187185 15.972258259867186 39.55847222826096 2 27.493193365457874 18.06562077239465 31.496434182169867 22.94475167997761 3 23.928341733805773 16.13903658479381 28.301028798792437 31.631592882607972 4 20.8354936440503 19.048525136978114 33.70179779928037 26.414183419691216 5 21.990396922127985 20.374539049301212 29.8460425055646 27.7890215230062 6 22.69681268263294 22.514824523551166 27.878815646368864 26.909547147447032 7 28.56399062413461 19.674730839699723 21.90083655646238 29.86044197970329 8 28.467838291412008 20.768529855766825 22.74551220285306 28.01811964996811 9 26.634040325696155 20.602312549313133 25.105498744643246 27.65814838034746 10 29.85523697498216 18.482925013180036 23.144645678653916 28.517192333183882 11 30.242900739780776 19.390855492394227 23.273492921271497 27.0927508465535 12 28.707206173197935 20.227053526304985 22.813909705011813 28.251830595485266 13 29.60012940826109 18.973068152368253 24.752368783623123 26.67443365574753 14 26.207946795501442 20.731642891171298 22.23495422478857 30.82545608853869 15 25.96338949284086 23.223094761786104 22.29119632670038 28.52231941867266 16 27.14495673222947 24.128609744797373 20.041512250227953 28.684921272745207 17 27.97155511671444 24.302821564490397 19.12055367536448 28.605069643430685 18 26.297538328859993 21.486493246506374 19.93931338507482 32.27665503955882 19 29.27171542774308 20.122080736480115 20.72869754418839 29.877506291588418 20 28.828604337202645 20.4282098165454 23.827249321752042 26.915936524499912 21 30.073878340962406 23.696656688329774 19.582583555520024 26.6468814151878 22 30.660298483644986 21.53787318831941 20.97725989539187 26.82456843264373 23 31.667981164116448 21.445710320293237 21.59841643185706 25.287892083733254 24 31.175157603335318 21.8578095563575 22.359609412705602 24.607423427601578 25 29.5332996489518 22.983969353702648 21.198848911103692 26.283882086241857 26 31.938022536512584 22.961761994937326 20.96266633720212 24.13754913134797 27 29.400753494163652 24.27559905675881 19.16859364428451 27.155053804793027 28 29.142093114038538 22.52475563810097 20.881785638759034 27.451365609101465 29 29.816588263133216 24.084399182823287 21.12635057536354 24.97266197867996 30 31.01980227155211 24.058513340510014 20.006270164204572 24.915414223733297 31 29.745704001517215 22.656092669870105 20.85197534138907 26.746227987223612 32 27.486046128841814 23.02350137772815 24.178825072385347 25.311627421044697 33 25.73734586490971 21.909817014912456 22.7864868928909 29.566350227286932 34 29.14631763689916 21.721423878597914 24.43894171284666 24.693316771656267 35 26.718435195503726 21.758781537605472 22.575139620254465 28.94764364663634 36 27.663310974112065 21.91794554808137 24.38632011909237 26.03242335871419 37 26.340724811718925 24.745478676274008 23.37317877730746 25.540617734699612 38 27.372421641622267 22.239860401929207 21.732396786121093 28.65532117032743 39 26.79829879586157 23.29850550932551 22.955283154109438 26.947912540703484 40 25.89670609307043 23.03866576593738 23.848850688406625 27.21577745258556 41 25.250524357400312 23.564834587554216 22.111967601631328 29.072673453414144 42 25.502985156767334 23.993488221812324 22.573661383983655 27.92986523743669 43 25.2220271976576 23.216681718951783 21.88002441921669 29.681266664173933 44 25.498992834965286 24.407179765675185 21.850735833271955 28.243091566087582 45 27.897492001845848 21.58891887874086 23.667993756329615 26.845595363083678 46 26.07529284161557 24.05333806498497 23.644863450752663 26.226505642646792 47 26.226949267683786 22.82029272007994 23.906918038429218 27.045839973807055 48 24.674277648487628 23.686992585510495 21.18961293167074 30.449116834331136 49 25.3667001401203 25.851000375052248 21.161725552470493 27.62057393235696 50 21.325590568873487 28.07457820075597 26.22130791469644 24.378523315674105 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 65730.0 1 52995.0 2 43065.0 3 42733.5 4 34654.5 5 24137.0 6 15512.0 7 13176.5 8 14319.0 9 15180.5 10 15332.0 11 14189.5 12 12818.5 13 12057.5 14 12561.5 15 13657.5 16 14593.0 17 15657.5 18 15851.5 19 16866.0 20 19000.0 21 21119.5 22 22910.5 23 25894.5 24 29681.5 25 33589.0 26 39501.5 27 45641.5 28 49154.5 29 54767.0 30 66001.5 31 81586.5 32 101318.0 33 113820.5 34 122827.5 35 130148.0 36 131891.5 37 136101.5 38 141727.0 39 150290.0 40 160749.5 41 184671.0 42 208339.5 43 204528.0 44 197681.0 45 202161.0 46 216109.5 47 232260.0 48 244979.0 49 277277.5 50 324449.0 51 361976.0 52 389641.0 53 386243.0 54 379436.5 55 390942.0 56 397560.5 57 404822.5 58 409662.5 59 414138.0 60 425225.5 61 435006.5 62 436019.5 63 431870.0 64 413149.5 65 391778.0 66 380250.5 67 371399.0 68 352091.0 69 323283.5 70 300370.5 71 289320.0 72 277602.0 73 251161.5 74 227397.0 75 208142.5 76 182085.0 77 142910.5 78 105614.0 79 82872.0 80 66025.5 81 52734.5 82 43031.5 83 34678.5 84 26270.5 85 19848.0 86 14840.5 87 11553.5 88 7491.0 89 3665.0 90 1830.0 91 1075.0 92 801.5 93 685.0 94 438.5 95 147.5 96 61.0 97 60.0 98 34.5 99 9.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 47975.0 25 39464.0 26 31603.0 27 37063.0 28 35949.0 29 40001.0 30 47274.0 31 50014.0 32 55755.0 33 48512.0 34 45578.0 35 42457.0 36 37790.0 37 43059.0 38 45552.0 39 41644.0 40 46925.0 41 47416.0 42 70038.0 43 104938.0 44 291702.0 45 567375.0 46 722964.0 47 779888.0 48 1045584.0 49 1049016.0 50 1001365.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.192556151178852 #Duplication Level Percentage of deduplicated Percentage of total 1 78.28274378331712 15.807286995129779 2 9.888786648860872 3.993597593483019 3 3.155173969658267 1.911330826471873 4 1.4814892479195862 1.196602193039359 5 0.8614038334988049 0.8696972638382667 6 0.5598681919226665 0.6783101941594453 7 0.40929323624866004 0.5785273658674145 8 0.3170959639462736 0.5122382445837852 9 0.2598959521382238 0.47231672463136576 >10 2.6441888660636033 12.754549803376298 >50 1.1897768740588919 17.451862343476403 >100 0.890060879655132 29.94176506016611 >500 0.04078062624585842 5.733806539641022 >1k 0.01873063647338846 6.712341590772604 >5k 4.741933284402142E-4 0.7234045023043306 >10k+ 2.370966642201071E-4 0.6623627590589287 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 13835 0.2156025159185096 No Hit CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 8498 0.13243152730578203 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6612 0.10304039286253598 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.013433275657517547 0.0 0.0 0.0 0.0 2 0.028705445198546776 0.0 0.0 0.0 0.0 3 0.03858560386080446 0.0 0.0 0.0 0.0 4 0.05010206640245814 0.0 0.0 0.0 0.0 5 0.06057441123059246 0.0 0.0 0.0 0.0 6 0.07586216461809213 0.0 0.0 0.0 0.0 7 0.08658385098975346 0.0 0.0 0.0 0.0 8 0.09749254351906006 0.0 0.0 0.0 0.0 9 0.10826098143013271 0.0 0.0 0.0 0.0 10 0.11786063085592251 0.0 0.0 0.0 0.0 11 0.12691484565524697 0.0 0.0 0.0 0.0 12 0.13822871819278496 0.0 0.0 0.0 0.0 13 0.14863872763503755 0.0 0.0 0.0 0.0 14 0.1589240663055266 0.0 0.0 0.0 0.0 15 0.16989509422071494 0.0 0.0 0.0 1.558384647043799E-5 16 0.18052327751355365 0.0 0.0 0.0 1.558384647043799E-5 17 0.1930838577687267 0.0 0.0 0.0 1.558384647043799E-5 18 0.21748816134143256 0.0 0.0 0.0 1.558384647043799E-5 19 0.22757091000780594 0.0 0.0 0.0 1.558384647043799E-5 20 0.23921204332122312 0.0 0.0 0.0 1.558384647043799E-5 21 0.25041682893346806 0.0 0.0 0.0 1.558384647043799E-5 22 0.2605307452927823 0.0 0.0 0.0 1.558384647043799E-5 23 0.27192253706267244 0.0 0.0 0.0 1.558384647043799E-5 24 0.28376626038020536 0.0 0.0 0.0 1.558384647043799E-5 25 0.2964515114071419 0.0 0.0 0.0 1.558384647043799E-5 26 0.31134966863288055 0.0 0.0 0.0 1.558384647043799E-5 27 0.32327131118276564 0.0 0.0 0.0 1.558384647043799E-5 28 0.3356916368197047 0.0 0.0 1.558384647043799E-5 1.558384647043799E-5 29 0.3487976517013431 0.0 0.0 1.558384647043799E-5 1.558384647043799E-5 30 0.3617634119647475 0.0 0.0 1.558384647043799E-5 1.558384647043799E-5 31 0.37608496687108 0.0 0.0 1.558384647043799E-5 1.558384647043799E-5 32 0.39017276408035595 0.0 0.0 1.558384647043799E-5 1.558384647043799E-5 33 0.4032164435761125 0.0 0.0 1.558384647043799E-5 1.558384647043799E-5 34 0.4154497630554063 1.558384647043799E-5 0.0 1.558384647043799E-5 1.558384647043799E-5 35 0.4254390086429571 1.558384647043799E-5 0.0 1.558384647043799E-5 1.558384647043799E-5 36 0.4346334780605155 1.558384647043799E-5 0.0 1.558384647043799E-5 1.558384647043799E-5 37 0.4414903705075082 1.558384647043799E-5 0.0 1.558384647043799E-5 1.558384647043799E-5 38 0.44585384751923085 1.558384647043799E-5 0.0 1.558384647043799E-5 1.558384647043799E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACCGA 15 1.3456487E-5 252.56717 44 CTATCAT 5945 0.0 195.85107 44 ATACGTT 30 1.9554136E-9 123.81141 43 ACTTCTA 2405 0.0 108.16806 44 ATTACGT 35 5.7098077E-9 106.12407 43 ACGAACA 105 7.2759576E-12 96.21607 44 CCTATCA 6100 0.0 93.77192 43 ACATTGG 1010 0.0 90.02394 44 GACATTG 595 0.0 78.0324 43 AATACGA 105 0.0 76.645164 43 TATTTCG 100 5.7916623E-9 75.77015 44 GATGCGT 100 5.916263E-8 75.77015 44 AATGTCG 25 0.0017577723 74.28685 43 CGAGATA 140 2.5465852E-11 72.162056 44 TGAGCAT 445 0.0 70.94584 44 CCCTATC 8480 0.0 69.92679 42 TCGTGCG 1495 0.0 67.909935 43 TCGCAAA 945 0.0 67.47394 43 CTCTATC 450 0.0 67.35124 44 CGATATT 55 7.2759576E-12 67.15083 42 >>END_MODULE