##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840948.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6815461 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.28806195208219 39.0 35.0 39.0 32.0 39.0 2 36.950607009562525 39.0 35.0 39.0 33.0 39.0 3 37.075950695044696 39.0 35.0 39.0 33.0 39.0 4 37.542649426062304 39.0 35.0 39.0 34.0 41.0 5 38.26847457567434 40.0 35.0 41.0 35.0 41.0 6 38.28692820632383 40.0 35.0 41.0 35.0 41.0 7 38.31015730263881 40.0 35.0 41.0 35.0 41.0 8 38.22557461630255 40.0 35.0 41.0 35.0 41.0 9 38.11278415355909 40.0 35.0 41.0 34.0 41.0 10 38.01594345562244 40.0 35.0 41.0 34.0 41.0 11 37.67674130920858 40.0 35.0 41.0 33.0 41.0 12 37.74655375476435 39.0 35.0 41.0 33.0 41.0 13 37.62937239315139 39.0 35.0 41.0 33.0 41.0 14 37.61417547543739 39.0 35.0 41.0 33.0 41.0 15 37.610251016035456 39.0 35.0 41.0 33.0 41.0 16 37.46792799489279 39.0 35.0 41.0 33.0 41.0 17 37.502232350827036 39.0 35.0 41.0 33.0 41.0 18 37.46271998328506 39.0 35.0 41.0 33.0 41.0 19 37.51608467864463 39.0 35.0 41.0 33.0 41.0 20 37.44616937871114 39.0 35.0 41.0 33.0 41.0 21 37.41503707526167 39.0 35.0 41.0 33.0 41.0 22 36.99004528086948 38.0 35.0 41.0 33.0 41.0 23 37.05149512263367 38.0 35.0 41.0 33.0 41.0 24 36.82044941640778 37.0 35.0 41.0 33.0 41.0 25 36.81721898763407 37.0 35.0 41.0 33.0 41.0 26 36.70485542323357 37.0 35.0 40.0 33.0 41.0 27 36.61901195503707 36.0 35.0 40.0 33.0 41.0 28 36.49493211449924 36.0 35.0 40.0 33.0 41.0 29 36.38149631456048 35.0 35.0 40.0 33.0 41.0 30 36.32762354411315 35.0 35.0 40.0 33.0 41.0 31 36.03990312269185 35.0 35.0 40.0 32.0 41.0 32 36.05318052872859 35.0 35.0 40.0 33.0 41.0 33 35.984587028387296 35.0 35.0 40.0 33.0 41.0 34 35.905290827584466 35.0 35.0 39.0 32.0 41.0 35 35.80068776757372 35.0 35.0 39.0 32.0 41.0 36 35.644702587720545 35.0 35.0 39.0 32.0 41.0 37 35.68739848607037 35.0 35.0 39.0 32.0 41.0 38 35.52530445209871 35.0 35.0 39.0 32.0 41.0 39 35.49554907140681 35.0 35.0 39.0 32.0 41.0 40 35.53081885070448 35.0 35.0 38.0 32.0 41.0 41 35.51038504481397 35.0 35.0 38.0 32.0 41.0 42 35.37674876883105 35.0 34.0 37.0 32.0 41.0 43 35.30916165587863 35.0 34.0 37.0 32.0 41.0 44 35.10451661715183 35.0 34.0 37.0 31.0 41.0 45 35.08403860859492 35.0 34.0 37.0 31.0 41.0 46 34.85223879683247 35.0 34.0 37.0 31.0 40.0 47 34.78381365063863 35.0 34.0 37.0 31.0 40.0 48 34.47570038234372 35.0 33.0 37.0 29.0 40.0 49 34.908791696973395 35.0 34.0 37.0 31.0 40.0 50 35.22513635088177 35.0 34.0 38.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 7.0 20 22.0 21 84.0 22 286.0 23 716.0 24 1760.0 25 3967.0 26 8179.0 27 16216.0 28 30538.0 29 54262.0 30 92636.0 31 156083.0 32 262490.0 33 501770.0 34 1067592.0 35 495983.0 36 759352.0 37 930870.0 38 844478.0 39 846683.0 40 741487.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.20861875667691 16.75274790656127 36.03863333676181 2 30.113634279471334 17.840847449644272 27.55932430689575 24.486193963988644 3 26.697900552875293 17.018936796791884 27.785970750914725 28.4971918994181 4 23.95160063273783 17.38451734959675 30.383784750584002 28.280097267081423 5 23.61554119376518 24.54608719791662 28.066362642233596 23.772008966084613 6 22.642532911566803 22.641696577825034 28.597522603386622 26.118247907221537 7 30.205278850542904 19.946941226719662 24.34984221903698 25.49793770370045 8 29.915540562846736 21.15291980982651 21.726307288677905 27.205232338648845 9 27.652685563016206 20.729881661710046 27.184910895976078 24.43252187929767 10 33.13420764934316 18.98829734334919 22.46528884839925 25.4122061589084 11 32.004174038997505 19.417483278093734 24.794360939047262 23.783981743861492 12 30.399044173240814 20.221552144455085 22.04041663505961 27.338987047244494 13 29.27231188029687 18.290134739234805 28.0881513370849 24.34940204338342 14 23.929327744667603 19.58363491479153 22.526047761112565 33.9609895794283 15 24.79797037940647 22.527793791205024 24.99436208350396 27.679873745884542 16 28.66371034916053 24.084753767940274 20.37156400718895 26.87997187571024 17 30.17412908679252 26.316004155845068 18.943751567208732 24.56611519015368 18 25.195287596833143 21.126553288178158 19.119190910196686 34.558968204792016 19 29.198421060585627 20.13891650175975 20.023751878266193 30.638910559388428 20 29.573171939506366 19.850440050937127 22.23318422627611 28.343203783280398 21 30.768689014580232 22.683219814477702 19.178893401341448 27.369197769600618 22 28.180280101375388 21.418771232056056 26.750677613737356 23.650271052831204 23 30.538697235594185 22.026389704232773 24.179963761805695 23.254949298367343 24 32.39446311848898 21.70494409695837 23.337482233410185 22.56311055114247 25 28.577599853678983 25.24346331093556 20.095324360927737 26.083612474457716 26 32.395784544717515 24.582210947511573 21.196969498843337 21.825035008927575 27 27.836252961584655 23.14949858363539 22.487811739073564 26.526436715706385 28 30.706748265151653 21.79822656277439 20.205861366427406 27.289163805646556 29 30.889612221629648 23.814178190536673 20.665617745298082 24.630591842535598 30 31.970418214760443 22.86232383943869 19.749766456391317 25.41749148940955 31 26.652813916497337 25.131202706802863 20.910098103215248 27.30588527348455 32 28.48619145478168 21.84841660532829 22.369756803620035 27.29563513627 33 24.82791357489212 21.231792248941574 22.710753132460233 31.229541043706078 34 27.285040293655715 23.49706521383088 26.03028618455543 23.187608307957973 35 25.12841564781753 20.848988755884353 22.13542674035906 31.887168855939063 36 28.85301975378957 22.047934304073323 25.748984420501454 23.350061521635652 37 28.17083893274842 24.031393659224214 24.731647183602647 23.066120224424715 38 26.01369668854207 25.385846090951077 23.879149285741605 24.721307934765246 39 28.33260446005704 23.334033612765328 21.02052185600162 27.312840071176016 40 27.37217260360938 22.859282902422567 21.6769160286297 28.091628465338353 41 28.211853766369167 22.784393958251243 21.25129520976946 27.75245706561013 42 24.81397798932315 25.954730127634427 24.213925642749174 25.01736624029325 43 27.266802358289006 22.541374172403838 22.286655982996965 27.90516748631019 44 27.319602534152647 26.045399202523672 21.453786889913772 25.181211373409905 45 28.200113609572774 22.197699316440698 22.62244338091467 26.97974369307186 46 26.723703619294238 24.803135222052884 21.65732760791397 26.815833550738905 47 30.891757622574744 22.176536877292197 21.907568365599666 25.024137134533397 48 23.657499466934283 28.08290628288614 21.8005941064025 26.45900014377708 49 27.523120353284643 25.133660630810812 21.566813018950544 25.776405996954004 50 24.50189386049648 28.675932526847703 24.980723416195787 21.841450196460023 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 89438.0 1 73251.0 2 58247.5 3 55179.5 4 46737.0 5 34993.0 6 23824.0 7 20658.0 8 22222.0 9 24346.0 10 25350.5 11 24141.0 12 21585.5 13 19867.5 14 20413.0 15 21560.0 16 21232.0 17 19812.5 18 19919.0 19 22481.5 20 25858.5 21 32551.5 22 39684.5 23 43797.5 24 44917.5 25 45963.5 26 52399.5 27 61870.0 28 68742.0 29 75919.0 30 85524.5 31 94306.0 32 103201.5 33 113400.0 34 126070.0 35 134579.5 36 136839.0 37 136091.0 38 136211.5 39 148088.5 40 165373.0 41 182675.5 42 194990.5 43 204219.0 44 211789.5 45 207117.5 46 210703.0 47 229232.0 48 258396.5 49 298084.5 50 335305.5 51 360540.0 52 371926.0 53 364200.5 54 363734.0 55 387814.5 56 409564.0 57 422827.5 58 421927.5 59 407483.0 60 404803.5 61 414929.0 62 414228.5 63 402110.0 64 387365.5 65 375198.5 66 368869.5 67 370564.5 68 428757.5 69 487210.0 70 457054.0 71 409529.0 72 368911.5 73 314536.5 74 254417.5 75 198280.0 76 151791.0 77 109664.0 78 83778.5 79 70461.0 80 57720.0 81 42940.0 82 30774.0 83 23540.0 84 19038.0 85 16147.5 86 12762.0 87 9643.5 88 6341.0 89 3786.5 90 2503.0 91 1456.5 92 973.0 93 841.5 94 540.5 95 248.5 96 196.0 97 190.0 98 131.5 99 72.5 100 72.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 46782.0 25 38967.0 26 32284.0 27 34886.0 28 37959.0 29 43371.0 30 55432.0 31 48052.0 32 54502.0 33 42693.0 34 46998.0 35 37376.0 36 32856.0 37 40485.0 38 44332.0 39 38429.0 40 41624.0 41 46461.0 42 63393.0 43 109533.0 44 305572.0 45 509973.0 46 851112.0 47 727828.0 48 1287579.0 49 924713.0 50 1272269.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.078252249312087 #Duplication Level Percentage of deduplicated Percentage of total 1 78.35794711930927 15.732906279997488 2 10.079474403072492 4.047564592107477 3 3.208855374719008 1.9328462293550734 4 1.389662426061575 1.1160797092742125 5 0.834896901286309 0.8381635293097761 6 0.5443393185413165 0.6557629288134716 7 0.4009817731648304 0.5635709232285933 8 0.30680134879167403 0.4928027897174728 9 0.23884191351740483 0.43159753685797525 >10 2.6199902354442215 12.6226525230753 >50 1.171157439880061 17.09225879125694 >100 0.7924695498595437 26.568742324849946 >500 0.03379985380813341 4.569599161361408 >1k 0.017585059075853195 6.472685549339759 >5k 0.0022837739059549606 3.319201293405317 >10k+ 9.135095623819841E-4 3.5435658380497537 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC 25028 0.36722387524482936 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCA 21804 0.3199196650087206 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG 18452 0.2707373719840815 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC 11995 0.17599689881579544 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGG 9483 0.13913952409088687 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGG 9336 0.13698266338843404 No Hit AGCCATTGTGGCTCAGGCCGGTTGCGCCTGCCCTCGGGCCCTCA 8068 0.11837790576455502 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 8040 0.117967075154564 No Hit AGCTATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCA 7111 0.1043363024159334 No Hit AGCTATTGTGGCTCCGGCCGGTTGCGCGGG 6852 0.10053611927351651 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.021803367373094792 0.0 0.0 0.0 0.0 2 0.0408483006505356 0.0 0.0 0.0 0.0 3 0.05521269947843587 0.0 0.0 0.0 0.0 4 0.06853534925957319 0.0 0.0 0.0 0.0 5 0.08455774304922294 0.0 0.0 1.4672521785393534E-5 0.0 6 0.10684530364123572 0.0 0.0 0.0022155507895944234 0.0 7 0.12173791325341016 0.0 0.0 0.0022155507895944234 0.0 8 0.13564746390596322 0.0 0.0 0.0022155507895944234 0.0 9 0.1495570145585163 0.0 0.0 0.0022155507895944234 0.0 10 0.1615444648571828 0.0 0.0 0.0022155507895944234 0.0 11 0.17351724263406393 0.0 0.0 0.0022155507895944234 0.0 12 0.18553403797630125 0.0 0.0 0.0022155507895944234 0.0 13 0.19863659993065766 0.0 0.0 0.0022155507895944234 0.0 14 0.2103892898807579 0.0 0.0 0.0022155507895944234 0.0 15 0.22319840139940644 0.0 0.0 0.0022155507895944234 0.0 16 0.2348337111752235 0.0 0.0 0.0022155507895944234 0.0 17 0.2503425667023845 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 18 0.27085475215836463 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 19 0.2809494471467154 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 20 0.2923793416175369 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 21 0.3055259211372496 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 22 0.3181736349162588 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 23 0.3303958455634916 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 24 0.34255936612358284 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 25 0.3557939807740078 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 26 0.36913130307693054 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 27 0.38158827407272966 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 28 0.39570324003027824 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 29 0.4095687731174751 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 30 0.42462278046928886 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 31 0.43967678782110264 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 32 0.45415856682328604 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 33 0.4667916080805099 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 34 0.4791898889891674 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 35 0.48922589389037663 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 36 0.4998194546194307 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 37 0.5073464582953376 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 38 0.5142718885780434 0.0 0.0 0.0022155507895944234 4.40175653561806E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGCGT 15 2.6608079E-5 212.89775 44 CTATCAT 3300 0.0 162.57645 44 TAAGCCA 2155 0.0 111.14152 44 CCTATCA 4045 0.0 82.23995 43 ACCGATG 90 1.9776053E-8 70.96591 44 TTAAGCC 2065 0.0 70.53499 43 TCACGGA 1510 0.0 69.195694 42 TCACCGT 695 0.0 68.378334 43 CAGGGTA 705 0.0 68.28387 43 TATCATA 865 0.0 67.68426 44 TCCGCAC 535 0.0 67.64975 44 AACGACA 510 0.0 64.13843 43 GGTACGA 50 1.3423825E-4 63.86932 44 CCCTATC 5145 0.0 63.804005 42 TGCACGA 220 0.0 62.901608 44 TCAGAGA 7640 0.0 60.215717 42 AGGCCGA 11330 0.0 58.497894 42 CGATCTA 55 0.0046672397 58.063023 44 GTACGAT 130 1.8018909E-8 57.318623 44 CCTATAG 300 0.0 56.772736 44 >>END_MODULE