##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840946.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8860614 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.76351932270156 38.0 35.0 39.0 30.0 39.0 2 36.62533589658685 39.0 35.0 39.0 33.0 39.0 3 36.73225139928226 39.0 35.0 39.0 33.0 39.0 4 37.16217296002286 39.0 35.0 39.0 33.0 41.0 5 37.80028031917427 40.0 35.0 41.0 34.0 41.0 6 37.80312628447645 39.0 35.0 41.0 34.0 41.0 7 37.54944251041745 39.0 35.0 41.0 33.0 41.0 8 37.58264145125835 39.0 35.0 41.0 33.0 41.0 9 37.4630384530914 39.0 35.0 41.0 33.0 41.0 10 37.02697928157123 38.0 35.0 40.0 33.0 41.0 11 37.0619459328665 38.0 35.0 40.0 33.0 41.0 12 37.10172726179021 38.0 35.0 40.0 33.0 41.0 13 36.95671947790525 38.0 35.0 40.0 33.0 41.0 14 36.939441555630346 38.0 35.0 40.0 33.0 41.0 15 36.94595272968668 38.0 35.0 40.0 33.0 41.0 16 36.80489343063584 38.0 35.0 40.0 33.0 41.0 17 36.78940308199861 38.0 35.0 40.0 33.0 41.0 18 36.806104069085954 38.0 35.0 40.0 33.0 41.0 19 36.81723930192648 37.0 35.0 40.0 33.0 41.0 20 36.81117730667423 37.0 35.0 40.0 33.0 41.0 21 36.693969853556425 37.0 35.0 40.0 33.0 41.0 22 36.49832528535833 36.0 35.0 40.0 33.0 41.0 23 36.15131321599158 35.0 35.0 40.0 32.0 41.0 24 36.06477101925442 35.0 35.0 40.0 32.0 41.0 25 35.99090233280984 35.0 35.0 39.0 32.0 41.0 26 35.872822542364155 35.0 35.0 39.0 32.0 41.0 27 35.72073585980696 35.0 34.0 39.0 32.0 41.0 28 35.53085404593809 35.0 34.0 39.0 31.0 41.0 29 35.42853518787036 35.0 34.0 39.0 31.0 41.0 30 35.34934354036929 35.0 34.0 39.0 31.0 41.0 31 35.23918114407219 35.0 34.0 38.0 31.0 41.0 32 35.182967302661986 35.0 34.0 38.0 31.0 41.0 33 35.0185029905096 35.0 34.0 37.0 31.0 40.0 34 35.003487717485775 35.0 34.0 37.0 31.0 40.0 35 34.89810422914405 35.0 34.0 37.0 31.0 40.0 36 34.84800748468468 35.0 34.0 37.0 31.0 40.0 37 34.756293598851016 35.0 34.0 36.0 31.0 40.0 38 34.7652879371028 35.0 34.0 36.0 31.0 40.0 39 34.71723681643076 35.0 34.0 36.0 31.0 40.0 40 34.55708229700175 35.0 34.0 36.0 31.0 39.0 41 34.42929305198995 35.0 34.0 35.0 31.0 39.0 42 34.397921851375365 35.0 34.0 35.0 31.0 39.0 43 34.28878260911614 35.0 34.0 35.0 31.0 39.0 44 34.142331830511935 35.0 33.0 35.0 30.0 38.0 45 33.9797054275742 35.0 33.0 35.0 30.0 38.0 46 33.77219221860559 35.0 33.0 35.0 29.0 37.0 47 33.69936733547978 35.0 33.0 35.0 29.0 37.0 48 33.67018053092757 35.0 33.0 35.0 29.0 37.0 49 33.78149174827562 35.0 33.0 35.0 30.0 37.0 50 33.65001674861525 35.0 33.0 35.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 35.0 21 192.0 22 500.0 23 1394.0 24 3427.0 25 7529.0 26 15073.0 27 30061.0 28 56387.0 29 101729.0 30 173145.0 31 288909.0 32 471946.0 33 828285.0 34 1575312.0 35 829934.0 36 1159480.0 37 1263909.0 38 1032005.0 39 660239.0 40 361117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 43.110443587769424 16.460913431055683 40.428642981174896 2 28.357662347101453 20.732163707842368 25.598316324354048 25.31185762070213 3 29.381033865147494 15.777732784658038 26.21896180106706 28.622271549127408 4 20.292092624732327 17.817929998982013 29.94530627335758 31.94467110292808 5 23.626703521900403 23.253873828608267 28.54337182502251 24.576050824468822 6 30.12529380018134 20.060889685522923 24.692306876250335 25.121509638045396 7 32.180230399383156 16.616049406959835 24.493359038098266 26.710361155558747 8 32.45421818397687 18.30818947761408 21.303162512214165 27.93442982619489 9 31.435135307778893 20.449530924154917 23.73353584751576 24.381797920550426 10 28.982494892566134 15.350764630983813 25.70932443282147 29.957416043628584 11 31.47912774442042 20.696274547113777 22.588344329185315 25.236253379280488 12 29.980755284001763 16.39571478906541 24.625257346725633 28.998272580207196 13 27.31338934299587 17.286849421496072 24.297684110830243 31.10207712467782 14 25.62168942242603 23.68251229542332 19.56307994005833 31.132718342092318 15 26.667316734483638 24.32813346795154 21.335417613271495 27.66913218429332 16 27.95863808083729 20.73474817885081 18.14891157655666 33.157702163755246 17 32.52022941073835 19.82373907722422 18.959306883247596 28.696724628789834 18 28.440308989873614 20.102861946136013 17.736344230772268 33.72048483321811 19 28.89866323033596 23.364667504983288 20.58770419295999 27.148965071720767 20 35.26762366580916 18.062472871518835 19.93443118050284 26.73547228216916 21 31.98339302445632 24.15588806825351 17.27147802624062 26.58924088104955 22 33.807803838424746 19.841220935704907 20.797114060041437 25.553861165828913 23 32.22924506134676 19.887368979170066 22.057861904378186 25.825524055104985 24 37.005584488840164 19.538702396921927 19.40147714368327 24.054235970554636 25 31.44462829544193 20.420536788296463 20.068301884045574 28.066533032216036 26 32.37541248934819 24.248563078700393 19.053467770069716 24.322556661881695 27 32.80544797472131 21.509360701866896 19.48308140747858 26.20210991593322 28 30.59651352308581 19.474848300405316 23.538008869081533 26.39062930742734 29 36.52898134190681 19.847296622069933 20.07015192855374 23.553570107469515 30 30.015611715098718 23.13899269466713 18.42369284946773 28.42170274076642 31 28.209247637288605 20.604017098425018 25.05029523889127 26.136440025395107 32 30.48704279621911 18.117681836017685 22.942645715670377 28.45262965209283 33 27.838747043106878 18.54913100657074 25.711303517278267 27.900818433044122 34 28.694770719840886 19.91920507885723 22.607440868920182 28.7785833323817 35 26.836411344977513 19.76763216480651 21.90084106462631 31.49511542558967 36 27.06930586026528 18.914134595031694 25.773597400456122 28.24296214424691 37 30.588260678812112 20.035487948754895 23.074073807691477 26.302177564741513 38 31.4708271802975 20.158007213068736 20.775246302496853 27.595919304136913 39 30.917844311919644 21.85504272962337 20.01015008615873 27.216962872298257 40 30.15229923011264 23.218306126117128 19.438559469736244 27.19083517403399 41 27.01661377818137 21.77267506966627 20.295586494474136 30.915124657678223 42 28.253542026162016 21.94478718950114 20.97580399047256 28.82586679386428 43 29.574333304188734 19.612499661831144 22.853170154935572 27.959996879044546 44 28.311659045505234 19.974994757677578 21.90031544930818 29.81303074750901 45 29.359414099024733 20.920028773752147 23.718256251433424 26.002300875789697 46 27.734164492929818 21.80220889071559 21.86765679400872 28.595969822345875 47 28.661523037020842 18.382694135742124 23.393601314447462 29.56218151278957 48 28.374803972943045 19.740083665416112 21.24850481735067 30.63660754429017 49 29.05107789693691 19.58671010493756 20.20725504962413 31.154956948501393 50 25.930594934740213 27.244763066910714 19.27339422651306 27.551247771836007 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 62385.0 1 44731.5 2 27580.0 3 24864.0 4 18473.0 5 13592.5 6 10492.0 7 9784.0 8 11075.5 9 12221.0 10 12767.0 11 13058.5 12 13052.0 13 11976.0 14 10908.0 15 10443.0 16 10660.0 17 11404.0 18 12049.5 19 13362.5 20 15578.0 21 18055.5 22 19422.5 23 21173.5 24 24744.0 25 28165.5 26 30890.5 27 33051.0 28 34410.5 29 37223.5 30 42502.5 31 49259.0 32 56623.5 33 63751.5 34 76139.5 35 86790.5 36 91871.5 37 97608.0 38 106228.0 39 127769.5 40 159863.5 41 202229.0 42 244208.0 43 285548.0 44 307260.5 45 282150.0 46 265616.5 47 279537.0 48 323503.5 49 399761.5 50 480619.0 51 532161.0 52 561476.5 53 587155.5 54 604441.0 55 605416.0 56 610833.0 57 644080.0 58 677351.5 59 749662.0 60 828183.5 61 790277.5 62 700603.5 63 652070.0 64 622701.0 65 590649.0 66 543304.5 67 506784.5 68 478961.5 69 450722.5 70 430981.0 71 446250.5 72 465230.0 73 413731.5 74 329835.0 75 275967.5 76 233563.5 77 175099.5 78 134805.0 79 118080.5 80 100295.0 81 75847.0 82 53003.0 83 39948.0 84 34939.5 85 30857.5 86 25962.0 87 18683.0 88 9442.0 89 4342.5 90 2739.5 91 1705.0 92 1047.5 93 848.5 94 597.5 95 298.5 96 231.5 97 223.0 98 335.5 99 448.0 100 448.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 68470.0 25 49494.0 26 47896.0 27 57783.0 28 67285.0 29 62613.0 30 72378.0 31 65451.0 32 77179.0 33 60607.0 34 62169.0 35 48172.0 36 56971.0 37 55904.0 38 59541.0 39 59495.0 40 68348.0 41 68092.0 42 101263.0 43 178670.0 44 444205.0 45 773271.0 46 1063822.0 47 1025656.0 48 1494195.0 49 1334260.0 50 1337424.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.018334040635533 #Duplication Level Percentage of deduplicated Percentage of total 1 72.5035864766253 11.613866673266891 2 12.429912149497246 3.982129698128018 3 4.2261815957126965 2.030891655495362 4 2.0015400087339987 1.28245345822391 5 1.222938854142848 0.9794721538466098 6 0.766442476083991 0.7366278962907106 7 0.5676661180838911 0.6365145852113037 8 0.4389235996007296 0.5624659869378117 9 0.36732850962442026 0.5295591692831492 >10 3.1992518756218606 11.486071602096727 >50 1.1977827674922419 13.939071269470485 >100 0.9828465601363232 27.28287860825716 >500 0.056718070118233425 6.130772908847057 >1k 0.03346967388602467 10.702182609521959 >5k 0.003807926969068675 4.340521343085828 >10k+ 0.0016033376711868104 3.764520382036998 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT 23124 0.2609751423546946 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTGTCCCGGGGCAGCAC 22464 0.25352644861857204 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGT 15341 0.17313698576644915 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTG 12155 0.13718010964025742 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTGTCCCGGGGACAGCA 11473 0.12948312611293078 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 11373 0.1283545361529122 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCG 11028 0.12446090079084812 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGT 10304 0.11628990948031367 No Hit AAGCAGTGGTATCAACGCAGAGTGCAG 9923 0.11198998173264291 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9814 0.11075981867622266 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTA 9391 0.10598588314534409 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGC 9360 0.10563602025773834 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.02154478233675454 0.0 0.0 0.0 0.0 2 0.08553583306980758 0.0 0.0 0.0 0.0 3 0.11448416554428395 0.0 0.0 0.0 0.0 4 0.13071328916935102 0.0 0.0 0.0 0.0 5 0.22363010057768007 0.0 0.0 0.0 0.0 6 0.25255586125295604 0.0 0.0 0.0 0.0 7 0.2725996189428859 0.0 0.0 0.0 0.0 8 0.29032976721477766 0.0 0.0 0.0 0.0 9 0.3012319462285571 0.0 0.0 0.0 0.0 10 0.31360129219036065 0.0 0.0 0.0 0.0 11 0.3331597561974825 0.0 0.0 0.0 0.0 12 0.3457209624524892 0.0 0.0 0.0 0.0 13 0.35768401602868605 0.0 0.0 0.0 0.0 14 0.3691956336208755 0.0 0.0 0.0 0.0 15 0.38763679356757896 0.0 0.0 0.0 0.0 16 0.4019360283610143 0.0 0.0 0.0 0.0 17 0.4237291004889729 0.0 0.0 0.0 0.0 18 0.4475197768461644 0.0 0.0 0.0 0.0 19 0.5021548168106634 0.0 0.0 0.0 0.0 20 0.5168152003913047 0.0 0.0 0.0 0.0 21 0.544296365917757 0.0 0.0 0.0 0.0 22 0.556755999076362 0.0 0.0 0.0 0.0 23 0.573222126593033 0.0 0.0 0.0 0.0 24 0.5870699254024608 0.0 0.0 0.0 0.0 25 0.6080165550604055 0.0 0.0 0.0 0.0 26 0.6695247078814177 0.0 0.0 0.0 0.0 27 0.6835982246828493 0.0 0.0 0.0 0.0 28 0.700109495797921 0.0 0.0 0.0 0.0 29 0.7142281561977534 0.0 0.0 0.0 0.0 30 0.7281323845051821 0.0 0.0 0.0 0.0 31 0.7401631534789801 0.0 0.0 0.0 0.0 32 0.7526905020351863 0.0 0.0 0.0 0.0 33 0.7643262645229778 0.0 0.0 0.0 0.0 34 0.7755783064243629 0.0 0.0 0.0 0.0 35 0.7865707726349438 0.0 0.0 0.0 0.0 36 0.7963782193875052 0.0 0.0 0.0 0.0 37 0.8038156272240276 0.0 0.0 0.0 0.0 38 0.8080704113732976 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 4540 0.0 174.44543 44 CTATCAT 4275 0.0 157.88084 44 CACTGCA 15600 0.0 117.62525 44 CGTACGA 45 6.578599E-6 115.596756 44 TTAAGCC 4490 0.0 89.23691 43 CGACGGG 5540 0.0 88.26251 44 TTAATCG 30 2.676158E-5 87.150345 43 TCGATAG 30 2.676158E-5 87.150345 43 GTGTTAG 1960 0.0 86.705696 43 AGGTCTG 3585 0.0 79.80529 44 AAGTCGA 180 0.0 79.47277 44 TCGCAAT 75 1.8189894E-12 78.43531 43 GGCCATA 50 0.001446278 78.02781 44 ACGCTTA 85 1.6767135E-6 76.49785 44 ATTAAGC 4985 0.0 75.65976 42 CGTATCC 155 0.0 75.619125 42 ACGGGTA 35 5.747525E-5 74.700294 43 ACGTTAG 180 0.0 72.24797 44 TCGCAAA 1390 0.0 71.94606 43 GCGATAC 95 0.0 68.8029 43 >>END_MODULE