##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840942.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2356777 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.08886076196433 38.0 35.0 39.0 31.0 39.0 2 37.18319679799998 39.0 37.0 39.0 34.0 39.0 3 37.27861142568856 39.0 37.0 39.0 33.0 39.0 4 37.86047852639431 39.0 37.0 40.0 33.0 41.0 5 38.223877354539695 40.0 37.0 41.0 34.0 41.0 6 38.146894678622544 39.0 37.0 41.0 34.0 41.0 7 38.013580835182964 39.0 37.0 40.0 33.0 41.0 8 37.93401284890339 39.0 37.0 40.0 33.0 41.0 9 37.78370927754302 39.0 36.0 40.0 33.0 41.0 10 37.556680161084394 39.0 36.0 40.0 33.0 41.0 11 37.42704252460033 39.0 36.0 40.0 33.0 41.0 12 37.3573842582476 38.0 35.0 40.0 33.0 41.0 13 37.22223655441308 38.0 35.0 40.0 32.0 41.0 14 37.17934535172399 38.0 35.0 40.0 32.0 41.0 15 37.13173032493104 38.0 35.0 40.0 32.0 41.0 16 37.16824162829152 38.0 35.0 40.0 32.0 41.0 17 37.19753629639121 38.0 35.0 40.0 32.0 41.0 18 37.31065094406471 39.0 35.0 40.0 33.0 41.0 19 37.40606726898642 39.0 35.0 40.0 33.0 41.0 20 37.43365833933376 39.0 35.0 40.0 33.0 41.0 21 37.366741953099506 39.0 35.0 40.0 33.0 41.0 22 37.20439820992822 39.0 35.0 40.0 33.0 41.0 23 37.04080700040776 38.0 35.0 40.0 32.0 41.0 24 36.85692409591574 38.0 35.0 40.0 32.0 41.0 25 36.71764417171619 38.0 35.0 40.0 31.0 41.0 26 36.583795298334515 38.0 35.0 40.0 31.0 41.0 27 36.431480704998094 37.0 35.0 40.0 31.0 41.0 28 36.367506707935526 37.0 35.0 40.0 31.0 41.0 29 36.20555209202574 37.0 34.0 40.0 31.0 41.0 30 36.05267589421478 37.0 34.0 40.0 31.0 41.0 31 35.7943827202535 36.0 34.0 40.0 31.0 41.0 32 35.65258761709181 36.0 34.0 39.0 30.0 41.0 33 35.56864042932174 35.0 34.0 39.0 30.0 41.0 34 35.519122423645236 35.0 34.0 39.0 31.0 41.0 35 35.297218235546346 35.0 34.0 39.0 30.0 41.0 36 35.228184694807936 35.0 34.0 39.0 30.0 41.0 37 35.1809643107325 35.0 34.0 38.0 31.0 40.0 38 35.09959650459213 35.0 34.0 38.0 30.0 40.0 39 35.04352756475885 35.0 34.0 38.0 30.0 40.0 40 34.92005020313533 35.0 33.0 37.0 30.0 40.0 41 34.794108877868254 35.0 33.0 37.0 30.0 40.0 42 34.73252784961675 35.0 33.0 37.0 30.0 40.0 43 34.62706056968831 35.0 33.0 37.0 30.0 40.0 44 34.407366461787056 35.0 33.0 37.0 30.0 40.0 45 34.14519487384625 35.0 33.0 36.0 29.0 39.0 46 33.89825134706174 35.0 33.0 36.0 28.0 39.0 47 33.82408149310255 35.0 33.0 36.0 28.0 39.0 48 33.882589427002856 35.0 33.0 36.0 29.0 39.0 49 33.665921609206855 35.0 33.0 36.0 28.0 39.0 50 34.06013397997278 35.0 33.0 37.0 29.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 1.0 20 12.0 21 48.0 22 162.0 23 515.0 24 1147.0 25 2009.0 26 3336.0 27 6217.0 28 12079.0 29 22799.0 30 39982.0 31 67105.0 32 106082.0 33 165960.0 34 250216.0 35 255708.0 36 341674.0 37 377523.0 38 334664.0 39 277970.0 40 91567.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 39.38951372997954 18.01184414138461 42.598642128635845 2 27.70559115266315 17.018962761432242 29.79238171451945 25.48306437138516 3 22.396179188781968 17.047136831359097 29.902617006191086 30.654066973667852 4 19.65506282520578 18.331560431894914 36.00094535885236 26.01243138404694 5 23.004212956932285 18.433776297036164 32.615134991558385 25.946875754473165 6 24.321435587669093 22.157675503452385 27.73219528194649 25.788693626932037 7 30.184315274631413 17.933431970865296 21.956383654456914 29.925869100046377 8 28.72202164226823 18.227901918594757 22.7629088369413 30.28716760219571 9 28.864971102484454 19.885844099802398 24.23699823954494 27.01218655816821 10 28.908292978079807 15.682264380550217 24.237804425280796 31.171638216089175 11 28.97350916102796 18.680893440490976 23.833862940787355 28.511734457693706 12 30.65253946385254 19.035148425158596 22.712798028833443 27.59951408215542 13 29.40053301606389 18.144695064488495 26.029785592782005 26.42498632666561 14 27.639356629838126 20.576278536323123 21.889555100037043 29.894809733801715 15 25.941868916745197 23.20499563598932 22.342207175307635 28.510928271957848 16 28.7201546858273 22.08227592173549 20.72949625696449 28.46807313547272 17 29.546876942536354 19.080506980507703 21.166109479174313 30.20650659778163 18 28.497053391135434 21.076113692555552 18.686748894783005 31.74008402152601 19 28.621630302739714 20.820467952631923 22.166755700687844 28.39114604394052 20 32.55980519158155 18.68793695797269 21.350301704403936 27.40195614604182 21 31.80020850508979 23.22311359963204 18.128104610661087 26.848573284617082 22 31.412730181939146 20.86421413650931 21.7462661931952 25.976789488356346 23 32.723927635071114 21.546714008156055 19.35147024941265 26.37788810736018 24 33.18315648871319 21.53003869267224 20.390092062167952 24.89671275644662 25 33.16859049533583 21.386841123061618 22.309030486973274 23.135537894629284 26 33.32103244764086 21.204473446019207 20.539235232262826 24.93525887407711 27 29.772020783802404 23.75659033248794 19.798379945703335 26.67300893800632 28 30.256629814482157 21.372695865607362 21.980687081135905 26.389987238774577 29 33.52160964152906 21.248242466236448 21.59341814047432 23.63672975176017 30 34.33361103610965 22.670893788457985 18.846189373161476 24.149305802270888 31 29.099261938388523 21.872558016159214 24.009629929670865 25.0185501157814 32 28.192823161639367 20.830247508054793 23.911596644430638 27.065332685875195 33 29.168911865904658 20.726886493399803 24.334193599146626 25.77000804154892 34 30.202334870877223 20.266609095266368 23.848814181385894 25.682241852470515 35 27.50065342211813 20.632652131086243 23.977382758399383 27.889311688396244 36 28.16067112704781 21.20738430818121 23.74190605663688 26.8900385081341 37 28.08885124360555 20.734437912527167 24.384203616177025 26.79250722769026 38 28.39664867387297 20.890569631351276 22.282393562701458 28.430388132074295 39 28.931343094809087 22.0928644899371 21.571430556200987 27.404361859052823 40 28.17899668097202 23.377826884174954 20.153738651053924 28.289437783799105 41 28.34405332196027 21.241583048152847 23.002146600256577 27.412217029630305 42 28.75905134108455 21.360795290714954 22.955645163277786 26.92450820492271 43 27.644365480761685 21.77551307091684 23.474809746460256 27.10531170186122 44 29.363628925864944 22.844571031181925 22.132162690093168 25.659637352859967 45 30.558116856999483 20.82463022863469 24.880418383802677 23.73683453056315 46 29.039542453926952 22.507493504786744 22.624066155137033 25.82889788614927 47 28.04400244491278 21.817105860683363 22.21249643699599 27.926395257407872 48 28.589107576958618 21.93936591020213 20.18428718543653 29.287239327402727 49 28.055004294462343 22.968484802293506 20.911246801138546 28.06526410210561 50 26.55699382436063 24.690781898747428 21.64395868950839 27.10826558738355 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22705.0 1 17437.0 2 14470.0 3 15231.0 4 12126.5 5 8221.0 6 4270.5 7 2881.5 8 3292.5 9 3747.0 10 4484.5 11 5027.5 12 4958.0 13 4368.5 14 3783.5 15 3570.0 16 3268.0 17 3015.5 18 3428.0 19 4695.5 20 5802.0 21 6353.5 22 7117.0 23 8456.5 24 9326.0 25 9571.5 26 9835.5 27 9814.0 28 9979.5 29 11197.0 30 12977.0 31 13837.5 32 16044.0 33 20237.5 34 26001.0 35 31910.5 36 34678.5 37 33274.5 38 32098.0 39 37420.5 40 47230.0 41 58668.5 42 71100.5 43 84338.5 44 90047.5 45 85274.0 46 81648.0 47 86530.5 48 102389.5 49 112876.5 50 122308.5 51 136685.0 52 141940.0 53 150924.0 54 162483.5 55 163299.0 56 167004.5 57 171625.5 58 172075.5 59 181927.5 60 193491.0 61 189790.5 62 178965.0 63 173533.0 64 163245.5 65 151592.5 66 144348.5 67 137936.0 68 125690.5 69 113060.5 70 105197.5 71 99049.5 72 92699.5 73 84354.5 74 78610.0 75 73285.5 76 63160.0 77 48909.0 78 39683.0 79 35236.0 80 30237.0 81 22949.0 82 17042.5 83 14873.5 84 14479.5 85 12918.5 86 9624.5 87 6712.5 88 3460.0 89 1476.0 90 1056.5 91 728.5 92 593.5 93 553.0 94 455.5 95 228.0 96 85.5 97 85.0 98 64.0 99 43.0 100 43.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 17778.0 25 16673.0 26 16107.0 27 14903.0 28 16822.0 29 22686.0 30 20016.0 31 20066.0 32 25580.0 33 18403.0 34 17525.0 35 14825.0 36 12654.0 37 18378.0 38 17040.0 39 16534.0 40 21500.0 41 20444.0 42 28486.0 43 44737.0 44 128207.0 45 244709.0 46 246051.0 47 316072.0 48 338307.0 49 452986.0 50 229288.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.934140929086052 #Duplication Level Percentage of deduplicated Percentage of total 1 69.98041487740291 9.051365483002396 2 11.132914733897234 2.8798937623945076 3 4.428976203484256 1.7185500716230162 4 2.3130396261267983 1.1966872199553809 5 1.458299084739059 0.9430922939386096 6 1.0436230371393744 0.8099020463520887 7 0.8046233111102641 0.7284977910509606 8 0.6046293429930261 0.6256288905706007 9 0.5076154794475126 0.5909013134063742 >10 4.220850525797635 11.961497161289689 >50 1.6689290259017688 16.06500056683813 >100 1.7220193665678118 38.12864292015687 >500 0.07884704059376428 7.0508907571367185 >1k 0.03521834479854804 8.249449722284664 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 4625 0.19624258043930334 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 4304 0.18262228458611063 No Hit CTTTTCCAAGCGGCTGCCGAAGATGGCGGAGG 3917 0.16620155407151377 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3584 0.15207208827988392 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTT 3329 0.14125222708809532 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 2760 0.11710908584053561 No Hit CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 2757 0.11698179335592634 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTA 2722 0.11549671436881809 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACG 2635 0.11180523231514904 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT 2633 0.11172037065874285 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGT 2613 0.110871754094681 No Hit TTCCCACGGGGAGGCAGGAAGAAATAAAGG 2397 0.101706695202813 No Hit AATTCGTGGAGAAAGAAATGGCTCC 2384 0.1011550944361728 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.019900058427250435 0.0 0.0 0.0 0.0 2 0.03772100627254933 0.0 0.0 0.0 0.0 3 0.04781954338488537 0.0 0.0 0.0 0.0 4 0.05961531362534512 0.0 0.0 0.0 0.0 5 0.06839849506338529 0.0 0.0 0.0 0.0 6 0.08414033232673265 0.0 0.0 0.0 0.0 7 0.09377213032883468 0.0 0.0 0.0 0.0 8 0.10429497572320165 0.0 0.0 0.0 0.0 9 0.11290843384842944 0.0 0.0 0.0 0.0 10 0.12309183261717167 0.0 0.0 0.0 0.0 11 0.13115368997575927 0.0 0.0 0.0 0.0 12 0.1401065947266118 0.0 0.0 0.0 0.0 13 0.14774414380316847 0.0 0.0 0.0 0.0 14 0.15758809594628598 0.0 0.0 0.0 0.0 15 0.16806851051244984 0.0 0.0 0.0 0.0 16 0.17736086188892713 0.0 0.0 0.0 0.0 17 0.1860591816705611 0.0 0.0 0.0 4.243082820309261E-5 18 0.19662445789313118 0.0 0.0 0.0 4.243082820309261E-5 19 0.20769890405413835 0.0 0.0 0.0 4.243082820309261E-5 20 0.2177125795100682 0.0 0.0 0.0 4.243082820309261E-5 21 0.23010238134537125 0.0 0.0 0.0 4.243082820309261E-5 22 0.24215273655504954 0.0 0.0 0.0 4.243082820309261E-5 23 0.25293016691863507 0.0 0.0 0.0 4.243082820309261E-5 24 0.26234981077972164 0.0 0.0 0.0 4.243082820309261E-5 25 0.2740607193637752 0.0 0.0 0.0 4.243082820309261E-5 26 0.28530488883759475 0.0 0.0 0.0 4.243082820309261E-5 27 0.29485182518329056 0.0 0.0 0.0 4.243082820309261E-5 28 0.3096177533979668 0.0 0.0 0.0 4.243082820309261E-5 29 0.32387451167420594 0.0 0.0 0.0 4.243082820309261E-5 30 0.3388525940298976 0.0 0.0 0.0 4.243082820309261E-5 31 0.3503937793011388 0.0 0.0 0.0 4.243082820309261E-5 32 0.36392921349792534 0.0 0.0 0.0 4.243082820309261E-5 33 0.37805867928955517 0.0 0.0 0.0 4.243082820309261E-5 34 0.38926041793517163 0.0 0.0 0.0 4.243082820309261E-5 35 0.39812846102961796 0.0 0.0 0.0 4.243082820309261E-5 36 0.40699650412406435 0.0 0.0 0.0 4.243082820309261E-5 37 0.4136581441519499 0.0 0.0 0.0 4.243082820309261E-5 38 0.4181982427696808 0.0 0.0 0.0 4.243082820309261E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATC 70 0.0 401.95587 44 AAAACGT 25 8.367351E-11 401.95587 44 TATGATT 15 2.102921E-6 401.95587 44 TATCTAG 10 3.3490438E-4 401.95587 44 ATCGACT 15 2.102921E-6 401.95587 44 ATCTAGT 20 6.6330704E-6 301.46692 44 CACGAGT 20 6.6330704E-6 301.46692 44 GACGAAC 60 0.0 301.4669 44 GTGTTAC 75 0.0 267.97058 44 CCCAGTA 30 9.971518E-8 267.97058 44 GCGTAAA 70 0.0 258.4002 44 ATAAATG 380 0.0 243.28908 44 ATATCTT 35 2.1507913E-7 229.68907 44 CGACGGG 845 0.0 225.95152 44 TAAGCCA 1060 0.0 225.62616 44 TCGAGGG 100 0.0 221.07573 44 ACGACAC 215 0.0 205.65184 44 CTATCAT 530 0.0 185.80978 44 ATAATTC 65 1.1641532E-10 185.51808 44 GATAATC 45 7.5252683E-7 178.64706 44 >>END_MODULE