##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840940.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4642659 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.0601743526716 39.0 37.0 39.0 33.0 39.0 2 37.64699238087484 39.0 37.0 39.0 35.0 39.0 3 37.78263576971731 39.0 37.0 39.0 35.0 39.0 4 38.128316983866355 39.0 38.0 40.0 35.0 41.0 5 38.86655233563352 40.0 38.0 41.0 35.0 41.0 6 38.84206529060179 40.0 38.0 41.0 35.0 41.0 7 38.766316027087065 40.0 38.0 41.0 35.0 41.0 8 38.63788768462211 40.0 38.0 41.0 35.0 41.0 9 38.547925229916736 40.0 38.0 41.0 35.0 41.0 10 38.36626575417234 40.0 38.0 41.0 34.0 41.0 11 38.31736683654776 40.0 37.0 41.0 34.0 41.0 12 38.30361544968088 40.0 37.0 41.0 34.0 41.0 13 38.17250437734066 40.0 37.0 41.0 34.0 41.0 14 38.18706607571222 40.0 37.0 41.0 34.0 41.0 15 38.12985769577305 40.0 37.0 41.0 34.0 41.0 16 38.07985488488386 40.0 37.0 41.0 34.0 41.0 17 38.09139590049581 40.0 36.0 41.0 34.0 41.0 18 38.189546335408224 40.0 37.0 41.0 34.0 41.0 19 38.1320913295592 40.0 36.0 41.0 34.0 41.0 20 38.21073699360647 40.0 36.0 41.0 34.0 41.0 21 38.119760680248106 40.0 36.0 41.0 34.0 41.0 22 37.989297512481535 40.0 35.0 41.0 33.0 41.0 23 37.83277470949299 39.0 35.0 41.0 33.0 41.0 24 37.70918798903818 39.0 35.0 41.0 33.0 41.0 25 37.60625584503208 39.0 35.0 41.0 33.0 41.0 26 37.49995166667067 39.0 35.0 41.0 33.0 41.0 27 37.375366912897704 39.0 35.0 41.0 33.0 41.0 28 37.29494649404002 39.0 35.0 41.0 33.0 41.0 29 37.137915403971 38.0 35.0 41.0 33.0 41.0 30 37.047081460359834 38.0 35.0 41.0 33.0 41.0 31 36.86885108974169 38.0 35.0 41.0 33.0 41.0 32 36.796151967661146 37.0 35.0 40.0 33.0 41.0 33 36.681688971818886 37.0 35.0 40.0 33.0 41.0 34 36.50974037580202 37.0 35.0 40.0 32.0 41.0 35 36.42513742557437 36.0 35.0 40.0 32.0 41.0 36 36.354010911342094 36.0 35.0 40.0 32.0 41.0 37 36.25865056926507 36.0 35.0 40.0 32.0 41.0 38 36.15418755692946 36.0 35.0 40.0 32.0 41.0 39 36.13546971646702 35.0 35.0 40.0 32.0 41.0 40 35.957875905561494 35.0 35.0 39.0 32.0 41.0 41 35.90309490351169 35.0 35.0 39.0 32.0 41.0 42 35.82225785280308 35.0 35.0 39.0 32.0 41.0 43 35.7371904166139 35.0 34.0 39.0 32.0 41.0 44 35.50571441280498 35.0 34.0 39.0 31.0 41.0 45 35.324475834473084 35.0 34.0 39.0 31.0 41.0 46 35.12327045538944 35.0 34.0 38.0 31.0 41.0 47 35.0070532753402 35.0 34.0 38.0 30.0 40.0 48 34.86451219928214 35.0 34.0 38.0 30.0 40.0 49 35.11787609629682 35.0 34.0 38.0 31.0 40.0 50 34.88975264066926 35.0 33.0 38.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 18.0 21 50.0 22 101.0 23 283.0 24 570.0 25 1296.0 26 2726.0 27 5906.0 28 12268.0 29 24040.0 30 44435.0 31 77727.0 32 128772.0 33 218433.0 34 392889.0 35 395898.0 36 566376.0 37 718513.0 38 733070.0 39 748600.0 40 570683.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 42.686141713186345 21.413741564909248 35.90011672190441 2 27.03648921878605 24.047749360872725 28.105617922832582 20.810143497508648 3 26.35771871248782 17.602046585803524 26.617569802132785 29.422664899575867 4 19.251360050350456 20.98323396140014 28.656336810435572 31.109069177813836 5 23.419122533013947 20.412375752774434 32.611936392485426 23.556565321726193 6 26.675467657650497 23.862079898609828 23.45401632986614 26.008436113873536 7 32.02113271726397 18.70247201011317 21.054076984762396 28.22231828786047 8 26.67535996074663 19.692701962388366 27.00620484941927 26.625733227445735 9 24.341675750900507 24.874689267508124 27.468763051518536 23.31487193007283 10 30.920750371715865 18.53106161792197 21.83991975288299 28.708268257479176 11 26.17090766304396 24.721867360923987 23.468038466749334 25.63918650928272 12 25.60104026593381 20.680088716401528 25.948707410990124 27.770163606674537 13 24.261980042040562 20.365139890739336 23.356766025676233 32.016114041543865 14 23.41011907185085 21.97126689683649 20.948749412782632 33.66986461853003 15 23.69922064058549 23.50584008000588 26.921081216604538 25.873858062804096 16 28.06525312326406 23.527228685113425 19.031442972658557 29.37607521896396 17 27.1970222236869 23.285621450983154 18.713737106257426 30.80361921907252 18 26.426321640249697 22.570126300467038 17.977154901964585 33.026397157318684 19 25.686120819986996 27.48295750344792 21.050049120557855 25.780872556007235 20 32.42624539084176 20.193126395886495 20.11504614058452 27.265582072687227 21 28.30039854316244 23.806292902407865 22.52144729992015 25.371861254509536 22 26.974994286679248 26.859478587593877 20.906596844609954 25.25893028111692 23 32.769626199124254 22.153942385171945 20.155454018914593 24.92097739678921 24 29.603940328161084 22.79448049059817 20.269505040107404 27.332074141133344 25 26.34673446686795 27.511030123678054 20.9761214429425 25.166113966511496 26 28.13800594794533 23.025147078430265 24.816229699183395 24.02061727444101 27 25.735623635724224 29.51299575446588 19.372584426142527 25.37879618366737 28 25.614076073122057 21.920836965229668 24.451523963904002 28.013562997744273 29 33.59421409053107 23.581251695662118 20.66790468472654 22.156629529080273 30 27.59564814802431 26.090270078209045 19.083889151175764 27.23019262259088 31 25.329949192988504 23.891420108511635 26.281401867564075 24.497228830935786 32 24.780543917647435 22.238675686629048 25.236127922259527 27.744652473463987 33 29.13560208422355 22.068889802009693 22.655909050738032 26.13959906302872 34 24.655659945004583 25.223120989917508 25.702016498625113 24.419202566452796 35 23.05308095269421 22.486690233580198 22.477734344794793 31.9824944689308 36 23.812314891902904 22.500605618468718 29.73417293864644 23.952906550981936 37 24.283349156941036 24.786649492746676 22.672932675388424 28.257068674923865 38 26.04592452505318 27.590605662603206 20.210694422713278 26.152775389630328 39 24.646099990867402 29.186134402122725 19.676573845322093 26.491191761687784 40 24.18530050139191 29.659040673153143 20.572247635865995 25.58341118958895 41 29.927702594327766 23.663515425441506 20.071052549680527 26.3377294305502 42 25.66321138505639 27.520087443718964 21.321428054377254 25.495273116847393 43 24.552735539354025 21.72872548754053 26.85460863886898 26.863930334236464 44 26.336496175688467 22.59192872583666 25.63102569180912 25.440549406665752 45 25.944136816948532 26.254731212376836 25.976706072249506 21.824425898425122 46 24.760138867876087 29.698195038533658 21.166204767078824 24.375461326511434 47 32.13659340371684 21.543075335511062 21.28165156447833 25.038679696293777 48 24.041276536105048 22.7196448248353 20.611264941618618 32.627813697441034 49 26.050001493397595 21.965654397293328 19.84312334892186 32.14122076038722 50 22.64947579856508 33.59535643731366 20.578334249172382 23.176833514948875 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 57510.0 1 46921.5 2 34420.5 3 28311.5 4 20962.0 5 15388.5 6 9557.5 7 6719.0 8 7589.5 9 7691.5 10 7258.0 11 7169.5 12 7315.0 13 7609.5 14 8393.5 15 9353.5 16 9794.0 17 9265.0 18 8839.0 19 9999.5 20 11880.0 21 13554.0 22 16042.5 23 20125.0 24 23590.5 25 25965.0 26 30120.0 27 37256.0 28 44282.0 29 49886.5 30 55646.0 31 63032.0 32 68819.5 33 69319.5 34 73150.5 35 83374.0 36 93008.0 37 98474.0 38 102980.0 39 113766.5 40 147945.0 41 186622.0 42 183881.5 43 247867.0 44 327312.0 45 258701.5 46 187722.0 47 189227.5 48 208182.5 49 241176.0 50 276774.0 51 293440.0 52 294320.0 53 294952.5 54 301931.0 55 294299.5 56 282978.5 57 288220.0 58 280137.0 59 266029.5 60 264290.5 61 271362.5 62 274522.5 63 268296.5 64 260184.5 65 250755.0 66 229916.0 67 216057.0 68 203329.5 69 186271.5 70 180433.5 71 186600.5 72 182520.0 73 151433.0 74 120506.5 75 103235.5 76 85533.5 77 63414.0 78 52089.5 79 48941.5 80 40550.0 81 26875.5 82 16714.5 83 13552.0 84 11553.5 85 9084.5 86 6882.0 87 4783.5 88 2824.0 89 1796.5 90 1319.0 91 1084.5 92 777.5 93 530.0 94 356.0 95 112.5 96 28.0 97 28.0 98 135.0 99 242.0 100 242.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 36183.0 25 23717.0 26 21731.0 27 23683.0 28 25833.0 29 25330.0 30 32466.0 31 27090.0 32 36310.0 33 26316.0 34 31655.0 35 22701.0 36 21747.0 37 24946.0 38 25384.0 39 27886.0 40 32491.0 41 32810.0 42 46413.0 43 73844.0 44 189218.0 45 344969.0 46 586604.0 47 470279.0 48 859460.0 49 607266.0 50 966327.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.372312633293719 #Duplication Level Percentage of deduplicated Percentage of total 1 75.72951014110278 9.369491750319108 2 9.809966129642959 2.427439357559301 3 3.3292373462919937 1.235710958362851 4 1.6709041344293782 0.8269179332569321 5 0.9593595965418318 0.5934748428083036 6 0.6937130112111753 0.5149700551492952 7 0.483625278916685 0.41884942036847705 8 0.3971418231369082 0.39308502364848547 9 0.3114202208074316 0.34676894989430146 >10 3.1744596536705743 9.242721572962562 >50 1.5609860657416097 14.221136734720444 >100 1.769803688987097 37.89040709873914 >500 0.06798765671931117 5.765319254317535 >1k 0.03581492630749428 8.067443914062187 >5k 0.004249228544956948 3.4113728503359115 >10k+ 0.0018210979478386921 5.274890283495169 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC 46155 0.9941501195758724 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 37247 0.8022773156503633 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 16784 0.3615169668933256 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 16627 0.3581352841119712 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 13246 0.2853106377186005 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT 10410 0.22422495384649185 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTA 9546 0.2056149288586562 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9059 0.19512525042222573 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACG 8168 0.17593366215352021 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 7893 0.17001033244095679 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGG 6497 0.13994135688190754 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGT 6464 0.13923055731639994 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTG 5824 0.1254453536217069 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 5803 0.12499302662547476 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTG 5484 0.11812196415890118 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGC 5375 0.11577417165464876 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5317 0.11452488756981721 No Hit CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC 5289 0.11392178490817438 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCG 5087 0.10957082999203688 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGG 5038 0.10851540033416196 No Hit AAGCAGTGGTATCAACGCAGAGTGCAG 4712 0.10149356220217767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.011717423140489104 0.0 0.0 0.0 0.0 2 0.027656564912477956 0.0 0.0 0.0 0.0 3 0.0371554318333524 0.0 0.0 0.0 0.0 4 0.04751587398514515 0.0 0.0 0.0 0.0 5 0.06705209234621798 0.0 0.0 0.0 0.0 6 0.08184964693724006 0.0 0.0 0.0 0.0 7 0.09404093645473424 0.0 0.0 0.0 0.0 8 0.10422906356034332 0.0 0.0 0.0 0.0 9 0.1144818088082713 0.0 0.0 0.0 0.0 10 0.1235929668752325 0.0 0.0 0.0 0.0 11 0.13528885063494864 0.0 0.0 0.0 0.0 12 0.1445723237480935 0.0 0.0 0.0 0.0 13 0.15385579686123835 0.0 0.0 0.0 0.0 14 0.16447471158230662 0.0 0.0 0.0 0.0 15 0.18224470071999688 0.0 0.0 0.0 0.0 16 0.19198050082937385 0.0 0.0 0.0 0.0 17 0.20875967845150806 0.0 0.0 0.0 0.0 18 0.23085908312456288 0.0 0.0 0.0 0.0 19 0.25892489627172705 0.0 0.0 0.0 0.0 20 0.2701253742736652 0.0 0.0 0.0 0.0 21 0.2874861151766692 0.0 0.0 0.0 2.153938077295791E-5 22 0.2984496599901048 0.0 0.0 0.0 2.153938077295791E-5 23 0.31221332430402493 0.0 0.0 0.0 2.153938077295791E-5 24 0.32436153505997317 0.0 0.0 0.0 4.307876154591582E-5 25 0.33879292017785495 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 26 0.3716189364758428 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 27 0.38798886586329084 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 28 0.402743341692767 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 29 0.4169808723836922 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 30 0.42990450084746695 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 31 0.44304352311897127 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 32 0.45657025424438885 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 33 0.46740456277318665 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 34 0.4797466279560915 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 35 0.4912055785273052 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 36 0.5007044454481796 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 37 0.508157071195623 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 38 0.5132188256772682 0.0 0.0 2.153938077295791E-5 4.307876154591582E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACT 20 5.0269045E-7 193.77994 44 ACCGATA 20 5.0269045E-7 193.77994 44 CGCAATT 45 0.0 193.77994 44 TAAGCCA 12680 0.0 157.33159 44 TAATCCG 20 1.2187358E-4 145.33496 44 CTATCAT 3300 0.0 143.27972 44 ACGGATC 60 0.0 129.18663 44 GCCGTTA 160 0.0 121.112465 44 ACTTCTA 825 0.0 112.7447 44 GCCGAAT 45 2.1931737E-7 107.655525 44 TAATGCG 40 1.6552804E-10 103.68337 43 TTAAGCC 12155 0.0 101.14262 43 CGGTACG 100 0.0 96.88997 44 CGTTCGA 235 0.0 93.28351 43 ATGTCGC 45 2.8371694E-5 86.12442 44 CGTATCC 35 9.189389E-7 84.63948 43 CGACGGG 3670 0.0 79.465614 44 ATTAAGC 16720 0.0 69.315895 42 ATAAGAT 600 0.0 68.13479 43 TAATTGC 105 0.0 67.711586 43 >>END_MODULE