##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840939.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7118176 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.41641201341467 39.0 37.0 39.0 35.0 39.0 2 37.831023565587586 39.0 38.0 39.0 35.0 39.0 3 38.019987002288225 39.0 38.0 39.0 35.0 40.0 4 38.50734542107416 39.0 38.0 41.0 35.0 41.0 5 39.27416883201539 41.0 39.0 41.0 35.0 41.0 6 39.25392965838439 40.0 39.0 41.0 35.0 41.0 7 39.27016036130604 40.0 39.0 41.0 35.0 41.0 8 39.14412048817 40.0 38.0 41.0 35.0 41.0 9 39.06890655696066 40.0 38.0 41.0 35.0 41.0 10 39.03104994875092 40.0 38.0 41.0 35.0 41.0 11 38.8823360085505 40.0 38.0 41.0 35.0 41.0 12 38.90897766506476 40.0 38.0 41.0 35.0 41.0 13 38.82464426279991 40.0 38.0 41.0 35.0 41.0 14 38.84469799566631 40.0 38.0 41.0 35.0 41.0 15 38.842860867727914 40.0 38.0 41.0 35.0 41.0 16 38.81782889324456 40.0 38.0 41.0 35.0 41.0 17 38.80027256982688 40.0 38.0 41.0 35.0 41.0 18 38.80675836056877 40.0 38.0 41.0 35.0 41.0 19 38.827474060770626 40.0 38.0 41.0 35.0 41.0 20 38.83780774737798 40.0 38.0 41.0 35.0 41.0 21 38.77777818362457 40.0 38.0 41.0 35.0 41.0 22 38.70205527371057 40.0 38.0 41.0 35.0 41.0 23 38.5947617760505 40.0 37.0 41.0 35.0 41.0 24 38.4196542766012 40.0 37.0 41.0 35.0 41.0 25 38.34205011367624 40.0 37.0 41.0 34.0 41.0 26 38.30677716444295 40.0 36.0 41.0 34.0 41.0 27 38.201947595880625 40.0 36.0 41.0 34.0 41.0 28 38.13090808639364 40.0 36.0 41.0 34.0 41.0 29 38.02126625209545 40.0 35.0 41.0 34.0 41.0 30 37.92915679272071 40.0 35.0 41.0 33.0 41.0 31 37.85107443083621 40.0 35.0 41.0 33.0 41.0 32 37.746216994644165 39.0 35.0 41.0 33.0 41.0 33 37.61293385885396 39.0 35.0 41.0 33.0 41.0 34 37.50217965965351 39.0 35.0 41.0 33.0 41.0 35 37.390461213750456 39.0 35.0 41.0 33.0 41.0 36 37.329979082041234 38.0 35.0 41.0 33.0 41.0 37 37.23650412236708 38.0 35.0 41.0 33.0 41.0 38 37.1304130016331 38.0 35.0 41.0 33.0 41.0 39 37.02941316895494 38.0 35.0 41.0 33.0 41.0 40 36.922495626765276 37.0 35.0 40.0 33.0 41.0 41 36.813956500375504 37.0 35.0 40.0 33.0 41.0 42 36.7135380078968 37.0 35.0 40.0 33.0 41.0 43 36.59430585808637 36.0 35.0 40.0 33.0 41.0 44 36.456500876390436 36.0 35.0 40.0 33.0 41.0 45 36.286018502129515 36.0 35.0 40.0 32.0 41.0 46 36.05812336022151 36.0 35.0 40.0 31.0 41.0 47 35.91564128761038 35.0 35.0 40.0 31.0 41.0 48 35.86248348151326 36.0 34.0 40.0 31.0 41.0 49 36.07087722237176 36.0 34.0 40.0 31.0 41.0 50 36.13024368140167 37.0 34.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 17.0 21 67.0 22 154.0 23 339.0 24 730.0 25 1707.0 26 3087.0 27 6037.0 28 12176.0 29 23285.0 30 43777.0 31 78200.0 32 132679.0 33 235030.0 34 478243.0 35 409000.0 36 591080.0 37 913773.0 38 1134088.0 39 1412166.0 40 1642537.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 43.064403015604 21.33186928786251 35.6037276965335 2 28.31354549255315 21.367594732133625 28.250959234500524 22.0679005408127 3 26.289979343022708 17.42987248418696 26.478047185121582 29.80210098766875 4 22.410530450497433 20.653394914652292 30.139504839442015 26.79656979540826 5 24.289705677409493 18.903761300647805 31.99840801913299 24.808125002809707 6 24.357363459403082 23.26289768614881 25.91300074625859 26.466738108189514 7 33.24178834577847 18.50082099683964 20.23706634958169 28.0203243078002 8 25.966146383567924 20.40164502816452 26.390229744249087 27.241978844018465 9 25.29700024275882 23.387789231398607 27.189507536762225 24.12570298908035 10 29.66110981240138 19.149596750628252 22.128070449508414 29.061222987461953 11 27.03876667281056 22.606957175546093 24.73038036710528 25.62389578453806 12 26.603683303138332 19.846994510953365 25.593466640892277 27.95585554501603 13 26.64400262089614 20.38794769896108 24.02408987920501 28.94395980093777 14 23.876917345117626 20.117569444756633 22.86366619763265 33.14184701249309 15 24.233061952949743 23.501203117203058 26.0298424764996 26.2358924533476 16 28.50461972280539 22.178546863690922 21.32549124944368 27.991342164060008 17 27.952090535552927 25.07402177186965 18.347509249560563 28.626378443016865 18 28.623006792751404 21.409908942965163 18.28146704998584 31.685617214297597 19 28.468683550392686 24.248810369398 20.879815278520788 26.40269080168852 20 30.688549988086837 20.31259131552802 21.632648588627198 27.366210107757944 21 28.94027908273131 23.260888744532306 21.8303958766965 25.968436296039883 22 28.337723034665057 24.503960003236784 21.885199242053023 25.273117720045136 23 32.91715461938564 21.87242911667259 20.430936239845714 24.77948002409606 24 29.589476292803102 22.91556151463521 21.630737986810104 25.864224205751583 25 28.43169770179193 25.88797101559913 21.373097538197676 24.30723374441126 26 29.954518429131383 22.967163779805524 23.657147709527415 23.42117008153568 27 26.701914582155332 26.858355431613457 20.980956856123615 25.45877313010759 28 27.326681573314904 22.93751666543988 22.827735989072913 26.9080657721723 29 31.089518760342404 23.887716260114072 21.25652906517235 23.76623591437117 30 27.418684314830305 25.060602442484413 20.6618697382119 26.858843504473377 31 26.681489740725933 24.33122265964054 24.301525200508674 24.685762399124847 32 26.02807540127164 22.75590150003409 23.918237769804602 27.297785328889674 33 27.876881385596054 22.525462991550857 22.49474979254991 27.102905830303182 34 25.389387538623158 25.20253000459568 25.35049645627 24.057586000511158 35 25.307670159980155 22.683535779743384 21.557419568226692 30.45137449204977 36 24.53416993220407 23.014489039354018 28.079066478963604 24.372274549478306 37 24.514901647462537 24.974223492552213 22.44395024583074 28.06692461415451 38 26.667749774386053 25.248250700654147 22.172079090575338 25.911920434384474 39 26.65226552047609 27.175544889424568 20.17325027513697 25.99893931496237 40 26.71905047650997 27.61595035340248 20.58890099929385 25.0760981707937 41 29.18462219802405 23.67656442154621 20.555593578331642 26.5832198020981 42 26.820235674281722 27.31909651342776 20.772339780930725 25.08832803135979 43 27.160215810755183 22.91713386725902 24.37534630105188 25.547304020933918 44 26.741144105204334 22.70411035611292 23.447323114363037 27.10742242431971 45 26.99372228938936 24.731889789895195 23.300596437508396 24.97379148320705 46 26.460268803314047 27.73161050090352 21.003626209701277 24.804494486081154 47 30.330311290061278 22.545228437305482 21.46919533861832 25.65526493401492 48 24.277182401591837 22.98312235501429 20.617172418029877 32.122522825363994 49 26.475244996588632 24.754962751410698 19.719999251856738 29.049793000143936 50 23.176417279226662 32.46443316023419 22.889580965806925 21.469568594732223 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 90628.0 1 72448.0 2 53620.0 3 47924.0 4 37255.0 5 26598.0 6 18474.0 7 15773.0 8 16650.0 9 17944.0 10 18749.5 11 18262.5 12 16882.0 13 15090.5 14 14724.0 15 16236.0 16 17868.5 17 18584.0 18 19180.5 19 22050.0 20 26623.0 21 30225.0 22 31990.5 23 36720.5 24 41924.5 25 43268.0 26 46534.0 27 53849.5 28 60001.0 29 66421.0 30 75493.5 31 86384.0 32 98835.5 33 108553.0 34 120834.0 35 130302.5 36 135416.0 37 142710.0 38 147860.5 39 165969.5 40 211444.0 41 260171.5 42 265265.5 43 316898.5 44 383715.0 45 323746.5 46 273598.0 47 286478.5 48 311336.0 49 357696.0 50 397330.0 51 411636.5 52 407315.5 53 402272.5 54 411106.5 55 409803.0 56 408404.0 57 422552.0 58 425483.5 59 431472.5 60 437445.0 61 431125.0 62 420382.0 63 419662.5 64 418087.0 65 402370.5 66 383902.0 67 373358.0 68 366553.0 69 351743.5 70 311734.0 71 275963.5 72 272321.0 73 256140.5 74 210396.5 75 172650.0 76 143977.0 77 108793.5 78 90089.5 79 85477.0 80 69779.0 81 44397.5 82 29205.5 83 25262.5 84 22741.0 85 19162.5 86 14024.0 87 9334.5 88 4932.0 89 2092.5 90 1233.0 91 815.5 92 654.0 93 550.5 94 399.5 95 203.5 96 115.0 97 109.0 98 55.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 44578.0 25 31405.0 26 29958.0 27 29221.0 28 30449.0 29 34527.0 30 31927.0 31 36200.0 32 48275.0 33 36589.0 34 40963.0 35 28402.0 36 25849.0 37 34605.0 38 37605.0 39 36690.0 40 44371.0 41 43815.0 42 69359.0 43 106537.0 44 296893.0 45 557912.0 46 868209.0 47 813656.0 48 1300759.0 49 1069082.0 50 1390340.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.926257056202225 #Duplication Level Percentage of deduplicated Percentage of total 1 78.85537115693715 16.501477670923016 2 9.959678460629409 4.16837583328503 3 3.1223532388744304 1.9601749949085572 4 1.4093179681976034 1.1796700030571072 5 0.8152242738365938 0.8529796356380179 6 0.5542189894294031 0.6958637422936986 7 0.4068600245516552 0.5959840221762479 8 0.296290134460503 0.4960194813549766 9 0.23819639321962857 0.44861030589367545 >10 2.410171788115152 12.092579812384923 >50 1.1712008570943913 17.749783482962602 >100 0.7061769521476152 25.105491170690424 >500 0.0337231875548016 4.699775669143548 >1k 0.018536586536745253 7.43761161363319 >5k 0.0022333236791259336 3.494804446638744 >10k+ 4.4666473582518674E-4 2.5207981150162557 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 37992 0.5337322370225182 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15946 0.22401806305435548 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 9955 0.13985324330277868 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT 9000 0.1264368849547974 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8683 0.12198349689583399 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC 8293 0.11650456521445944 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC 7936 0.1114892354445858 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.018810998772719304 0.0 0.0 0.0 0.0 2 0.03670884226520951 0.0 0.0 0.0 0.0 3 0.048074113368368525 0.0 0.0 0.0 0.0 4 0.060015374725210506 0.0 0.0 0.0 0.0 5 0.06951218963959306 0.0 0.0 0.0 0.0 6 0.08592088759817122 0.0 0.0 0.0 0.0 7 0.09644324613496491 0.0 0.0 0.0 0.0 8 0.10720442989889545 0.0 0.0 0.0 0.0 9 0.11956714753892009 0.0 0.0 0.0 0.0 10 0.13100266135594288 0.0 0.0 0.0 0.0 11 0.14170765094878238 0.0 0.0 0.0 0.0 12 0.15298863079530486 0.0 0.0 0.0 0.0 13 0.1650422804943289 0.0 0.0 0.0 0.0 14 0.17550844486003156 0.0 0.0 0.0 0.0 15 0.18966937597496886 0.0 0.0 0.0 5.619417109102107E-5 16 0.20038841411058114 0.0 0.0 0.0 5.619417109102107E-5 17 0.21476007336710978 0.0 0.0 0.0 5.619417109102107E-5 18 0.23379584882419316 0.0 0.0 0.0 5.619417109102107E-5 19 0.2463131004347181 0.0 0.0 0.0 5.619417109102107E-5 20 0.2591675170717892 0.0 0.0 0.0 5.619417109102107E-5 21 0.27116497259972216 0.0 0.0 0.0 5.619417109102107E-5 22 0.28425821446393007 0.0 0.0 0.0 5.619417109102107E-5 23 0.29673332044613676 0.0 0.0 0.0 5.619417109102107E-5 24 0.3102058729652091 0.0 0.0 0.0 5.619417109102107E-5 25 0.324099881767464 0.0 0.0 0.0 5.619417109102107E-5 26 0.33941279338976726 0.0 0.0 0.0 5.619417109102107E-5 27 0.3548240448114798 0.0 0.0 0.0 5.619417109102107E-5 28 0.36749583039250505 0.0 0.0 0.0 5.619417109102107E-5 29 0.38252777115935316 0.0 0.0 0.0 5.619417109102107E-5 30 0.3965341683037902 0.0 0.0 0.0 5.619417109102107E-5 31 0.4098100412240439 0.0 0.0 0.0 5.619417109102107E-5 32 0.4234511762563893 0.0 0.0 0.0 5.619417109102107E-5 33 0.43783688405569066 0.0 0.0 0.0 5.619417109102107E-5 34 0.4513937278313995 0.0 0.0 0.0 5.619417109102107E-5 35 0.46305401833278637 0.0 0.0 0.0 5.619417109102107E-5 36 0.4734780370701708 0.0 0.0 0.0 5.619417109102107E-5 37 0.48117663850964065 0.0 0.0 0.0 5.619417109102107E-5 38 0.4870629779314251 0.0 0.0 0.0 5.619417109102107E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 12530 0.0 177.8027 44 CTATCAT 5365 0.0 134.10432 44 TTAAGCC 12170 0.0 104.42238 43 TCGCAAA 790 0.0 73.22054 43 ATTAAGC 16990 0.0 71.70135 42 CGACGGG 4450 0.0 70.58877 44 GAGTTAC 565 0.0 68.25278 43 ATTAGTC 525 0.0 67.13866 44 TCCGCAC 195 0.0 65.91935 43 ATGTGCG 35 1.6650847E-7 65.26103 42 ATCTACG 160 0.0 64.79374 44 CGTACAA 280 0.0 62.942486 44 TTACGAG 165 0.0 62.83029 44 GATATCC 105 0.0 61.210827 43 AACGACA 470 0.0 59.671677 43 AGGCGTA 150 0.0 58.437027 41 TTACGAT 80 6.7484507E-10 58.42852 43 ATAACGG 60 3.5768244E-7 58.42852 43 CGTATCC 110 0.0 58.428516 43 ACGAAAC 90 9.038662E-6 57.594433 44 >>END_MODULE