##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840937.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9679102 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.56668407875028 39.0 38.0 39.0 35.0 39.0 2 37.92510524220119 39.0 38.0 39.0 35.0 39.0 3 38.09146922927354 39.0 38.0 39.0 35.0 40.0 4 38.55274931496744 39.0 38.0 41.0 35.0 41.0 5 39.3193253878304 41.0 39.0 41.0 35.0 41.0 6 39.321098486202544 41.0 39.0 41.0 35.0 41.0 7 39.352159425533486 41.0 39.0 41.0 35.0 41.0 8 39.26941104660329 40.0 39.0 41.0 35.0 41.0 9 39.17119429054472 40.0 39.0 41.0 35.0 41.0 10 39.110753042999235 40.0 39.0 41.0 35.0 41.0 11 38.84170225708955 40.0 38.0 41.0 35.0 41.0 12 38.91982913290923 40.0 38.0 41.0 35.0 41.0 13 38.86341088253848 40.0 38.0 41.0 35.0 41.0 14 38.84681647119743 40.0 38.0 41.0 35.0 41.0 15 38.88178438454311 40.0 38.0 41.0 35.0 41.0 16 38.811900525482635 40.0 38.0 41.0 35.0 41.0 17 38.7914226960311 40.0 38.0 41.0 35.0 41.0 18 38.81132020305189 40.0 38.0 41.0 35.0 41.0 19 38.86235437956951 40.0 38.0 41.0 35.0 41.0 20 38.891501918256466 40.0 38.0 41.0 35.0 41.0 21 38.818101204016656 40.0 38.0 41.0 35.0 41.0 22 38.70125617025216 40.0 38.0 41.0 35.0 41.0 23 38.60512679791989 40.0 37.0 41.0 35.0 41.0 24 38.44802183095084 40.0 37.0 41.0 34.0 41.0 25 38.40077359507632 40.0 37.0 41.0 34.0 41.0 26 38.343067703300555 40.0 37.0 41.0 34.0 41.0 27 38.27529237120324 40.0 36.0 41.0 34.0 41.0 28 38.16275723265139 40.0 36.0 41.0 34.0 41.0 29 38.05692717652082 40.0 36.0 41.0 34.0 41.0 30 37.956432593698594 40.0 35.0 41.0 34.0 41.0 31 37.82113727171716 40.0 35.0 41.0 33.0 41.0 32 37.72414219232708 39.0 35.0 41.0 33.0 41.0 33 37.62945772813971 39.0 35.0 41.0 33.0 41.0 34 37.54619494351125 39.0 35.0 41.0 33.0 41.0 35 37.42101838876262 39.0 35.0 41.0 33.0 41.0 36 37.34939201703467 39.0 35.0 41.0 33.0 41.0 37 37.28335228997025 38.0 35.0 41.0 33.0 41.0 38 37.19467835762236 38.0 35.0 41.0 33.0 41.0 39 37.11902230306924 38.0 35.0 41.0 33.0 41.0 40 37.04089862838966 38.0 35.0 41.0 33.0 41.0 41 36.93428303735808 37.0 35.0 40.0 33.0 41.0 42 36.8225301274747 37.0 35.0 40.0 33.0 41.0 43 36.72325134507903 37.0 35.0 40.0 33.0 41.0 44 36.5721488721957 37.0 35.0 40.0 33.0 41.0 45 36.45394131878328 37.0 35.0 40.0 32.0 41.0 46 36.17648136589441 36.0 35.0 40.0 31.0 41.0 47 36.04825971513854 36.0 35.0 40.0 31.0 41.0 48 35.867297185184725 36.0 34.0 40.0 30.0 41.0 49 36.19369450631604 36.0 34.0 40.0 31.0 41.0 50 36.187636513112764 37.0 34.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 4.0 20 21.0 21 73.0 22 153.0 23 440.0 24 834.0 25 1892.0 26 3710.0 27 7653.0 28 15402.0 29 30524.0 30 57004.0 31 102509.0 32 172518.0 33 298356.0 34 639160.0 35 516040.0 36 813414.0 37 1279804.0 38 1480446.0 39 1955853.0 40 2303290.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 45.60862154361014 16.574926062355786 37.81645239403407 2 28.088814437537696 19.567331762801963 28.760684617229987 23.583169182430353 3 27.309899203459164 17.065860035362785 28.14955354329358 27.47468721788447 4 24.028458425172087 18.55264052388331 31.817218167553147 25.601682883391458 5 24.73552815126858 20.916971429787598 29.157549946265675 25.189950472678145 6 23.162024741551438 22.98783502849748 27.65535480460894 26.194785425342143 7 31.78615123593077 20.90604066368967 22.132590399398623 25.17521770098094 8 26.605835954616452 20.752865296801296 24.445542572027858 28.195756176554394 9 28.656356757062795 20.452010940684374 25.907475714172655 24.984156588080175 10 30.591329650209286 18.628773619701498 24.618885099051543 26.161011631037674 11 28.388966249141706 20.689202366087265 26.12274361815797 24.79908776661306 12 30.638358806426464 20.2190451138959 23.65366125907135 25.48893482060629 13 29.22002475022993 18.987835855020435 26.555624685017264 25.236514709732372 14 24.75841250562294 20.67962503133039 23.070342682616634 31.491619780430042 15 24.688085733573217 22.348984440911977 26.20851603795476 26.754413787560043 16 26.537441179977233 23.799459908574164 21.418474565099118 28.244624346349482 17 27.065248408375076 26.783352422569777 20.020875903570392 26.13052326548475 18 25.815401056833576 20.789697226044318 21.32278386982594 32.07211784729617 19 28.726797176019016 21.309394197932825 22.738721009449016 27.22508761659914 20 28.248271378894447 20.202452665546865 23.105180625227423 28.444095330331265 21 27.456348739790116 23.544374261165963 21.642710243160987 27.356566755882934 22 28.541872996069262 22.365246280078463 24.80520403649016 24.28767668736211 23 31.593034147176052 22.48661084468373 21.993197302807637 23.92715770533258 24 29.57004689071362 22.352796778048212 24.88106851234753 23.196087818890636 25 28.22116821927293 25.752608522070158 21.901682440303006 24.12454081835391 26 29.69785558650902 25.736849216625668 22.500933428203567 22.064361768661744 27 28.48483131774894 23.8581406266802 23.632489594234144 24.02453846133671 28 28.30875821263547 22.40063435529165 22.395797659629395 26.89480977244348 29 28.982303696324006 23.536607009732162 21.57995571052917 25.90113358341466 30 28.975655256556244 23.99977373447101 21.38775978057783 25.63681122839492 31 26.715988852591842 26.14154406192281 22.12441526398399 25.018051821501363 32 28.87664295027617 22.68453824793199 23.670109095108984 24.76870970668286 33 25.550250181305746 22.114471052836652 23.91671852774309 28.418560238114516 34 26.682693252758476 24.911738380415663 24.228196802662218 24.177371564163643 35 25.932460843651935 22.35886803581661 22.56009766127581 29.148573459255644 36 26.985284787250173 22.805551121901228 26.901190277755056 23.30797381309354 37 26.122860105127444 24.055977803245764 26.221675947331235 23.599486144295557 38 26.364379783915076 24.167243895318382 24.610088653832797 24.858287666933744 39 28.79446231422678 23.875352845629692 22.132918888745163 25.19726595139836 40 27.6411796335173 24.59489181302586 22.350209283798783 25.413719269658063 41 28.34856604738064 23.4000752637763 22.187471952625735 26.063886736217324 42 24.843205910630754 26.472226472627934 23.628460349602815 25.056107267138493 43 28.12598314530193 23.12479510860534 22.74870524873337 26.00051649735936 44 27.880575746165814 23.813895137505856 23.09923437708879 25.20629473923954 45 26.54285552352384 22.615372514484346 23.575727125192827 27.266044836798986 46 26.368834758854387 23.815586556414246 22.832956239007636 26.98262244572373 47 29.17530015444919 22.515785948550125 23.344907863849386 24.9640060331513 48 23.821952309379697 26.4960932251321 22.34915833648417 27.332796129004034 49 26.595146426420545 24.51118417851897 22.257940036980933 26.63572935807955 50 24.14356869544329 28.317174805639496 24.823836930281825 22.71541956863539 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 103489.0 1 89996.5 2 86309.0 3 86759.5 4 68293.5 5 48841.5 6 32668.0 7 27534.5 8 28239.0 9 28148.0 10 27519.5 11 28113.0 12 28986.0 13 27490.0 14 26954.0 15 28806.0 16 30090.5 17 30502.5 18 32842.0 19 36386.0 20 39054.5 21 44381.5 22 50316.0 23 57097.5 24 65314.0 25 73130.5 26 83875.5 27 97055.0 28 107361.5 29 116986.0 30 128826.5 31 144170.0 32 164073.0 33 182540.0 34 199816.5 35 209465.0 36 215866.5 37 223405.0 38 231334.0 39 250267.5 40 272881.0 41 307152.5 42 341372.0 43 357405.0 44 361019.5 45 352386.5 46 360695.0 47 383347.5 48 411902.5 49 453947.5 50 510309.0 51 543766.5 52 542150.5 53 541808.0 54 555101.5 55 573333.0 56 582160.5 57 583711.0 58 577204.0 59 571485.5 60 575961.0 61 578125.0 62 564288.5 63 546719.0 64 538086.5 65 539862.0 66 545939.5 67 551003.0 68 570086.0 69 567556.0 70 492731.0 71 395518.5 72 330954.5 73 290981.5 74 259909.5 75 233123.5 76 200151.0 77 155304.5 78 122884.5 79 104222.5 80 81391.0 81 58848.5 82 44981.5 83 36390.5 84 27605.0 85 21907.5 86 17858.5 87 13990.5 88 9118.0 89 5275.0 90 3014.0 91 1527.0 92 955.0 93 832.0 94 629.0 95 336.0 96 173.0 97 111.5 98 68.0 99 20.5 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 65804.0 25 43735.0 26 37588.0 27 42025.0 28 46622.0 29 56127.0 30 51578.0 31 53997.0 32 67908.0 33 56850.0 34 59301.0 35 50603.0 36 41323.0 37 51939.0 38 55689.0 39 54758.0 40 63467.0 41 61666.0 42 94651.0 43 140705.0 44 384195.0 45 730388.0 46 1181035.0 47 1066812.0 48 1811063.0 49 1377682.0 50 1931591.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.340660813605425 #Duplication Level Percentage of deduplicated Percentage of total 1 75.37421168831764 13.824128506683275 2 11.328726359056665 4.155526552032188 3 3.718952354374452 2.0462413114062343 4 1.6356246254767202 1.1999374589699572 5 0.9774856702062626 0.896386656370642 6 0.6111764623007782 0.6725628115390726 7 0.4570766956344269 0.5868162048304211 8 0.3491537165239229 0.5122967909260008 9 0.2784745726042558 0.45966669132135535 >10 2.909497848508275 13.112723369409515 >50 1.4339041763509326 19.03154836862216 >100 0.8628966857331253 26.10011624781503 >500 0.040080926815391146 5.07364205086277 >1k 0.020233160171231106 7.02055442346169 >5k 0.0013488773447487407 1.6202829043379698 >10k+ 0.0011561805812132062 3.6875696514117644 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC 28934 0.29893269024337177 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC 22774 0.2352904226032539 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG 20512 0.21192048601202879 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAG 11377 0.11754189593208131 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCA 10734 0.11089871767029627 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10009 0.10340835337823695 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.01673708986639463 0.0 0.0 0.0 0.0 2 0.03598474321274846 0.0 0.0 0.0 0.0 3 0.048155293745225536 0.0 0.0 0.0 0.0 4 0.05917904367574595 0.0 0.0 0.0 0.0 5 0.06838444310226299 0.0 0.0 0.0 0.0 6 0.08674358427052427 0.0 0.0 0.0 0.0 7 0.10093911604609601 0.0 0.0 0.0 0.0 8 0.11289270430252724 0.0 0.0 0.0 0.0 9 0.12458800413509435 0.0 0.0 0.0 0.0 10 0.1355394333069328 0.0 0.0 0.0 0.0 11 0.14624290559186173 0.0 0.0 0.0 0.0 12 0.15711168246806367 0.0 0.0 0.0 0.0 13 0.16795979627035648 0.0 0.0 0.0 0.0 14 0.1781880178553754 0.0 0.0 0.0 0.0 15 0.1920839350592648 0.0 0.0 0.0 0.0 16 0.2044817794047423 0.0 0.0 0.0 0.0 17 0.2172928852284024 0.0 0.0 0.0 0.0 18 0.2321702984429754 0.0 0.0 0.0 0.0 19 0.244423501271089 0.0 0.0 0.0 0.0 20 0.25503398972342683 0.0 0.0 0.0 0.0 21 0.26786575862099604 0.0 0.0 0.0 0.0 22 0.2799743199317457 0.0 0.0 0.0 0.0 23 0.2923205065924504 0.0 0.0 0.0 0.0 24 0.3051109493422014 0.0 0.0 0.0 0.0 25 0.31838697432881685 0.0 0.0 0.0 0.0 26 0.33498975421480215 0.0 0.0 0.0 0.0 27 0.348637714531782 0.0 0.0 0.0 0.0 28 0.36209970718357964 0.0 0.0 0.0 0.0 29 0.37616092897874204 0.0 0.0 0.0 0.0 30 0.3912553044693609 0.0 0.0 0.0 0.0 31 0.4076101274684366 0.0 0.0 0.0 0.0 32 0.42177466463314467 0.0 0.0 0.0 0.0 33 0.43731329621280984 0.0 0.0 0.0 0.0 34 0.4504756742929251 0.0 0.0 0.0 0.0 35 0.46253257791890195 0.0 0.0 0.0 0.0 36 0.47359765399724063 0.0 0.0 0.0 0.0 37 0.48050945221984437 0.0 0.0 0.0 0.0 38 0.48725594585117504 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCAT 3295 0.0 129.96632 44 TAAGCCA 4090 0.0 91.21746 44 ACGGTAT 40 2.1590658E-6 73.315475 43 CACGATT 295 0.0 71.393005 44 TATGCGC 85 0.0 71.36372 42 TTAAGCC 3490 0.0 63.86219 43 CCTATCA 4275 0.0 58.858177 43 AATCGCA 445 0.0 56.342793 44 TTATACG 90 9.813393E-7 55.71676 44 ATTAAGC 3865 0.0 55.126858 42 ATAGTCG 110 7.2759576E-12 54.703728 44 GTGTTAG 2295 0.0 54.435543 43 AGGCCGA 11685 0.0 52.982677 42 CCCTATC 4955 0.0 51.722492 42 CGAGATT 905 0.0 50.97622 44 TACGCTA 1545 0.0 50.794685 42 TGTGTTA 2850 0.0 50.416275 42 CAACTAG 300 0.0 50.14509 44 ACGACAC 550 0.0 49.233356 44 TCGCAAA 1095 0.0 47.6718 43 >>END_MODULE