ERR840936.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840936.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8656568
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAA	17311	0.19997532509419438	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAA	17288	0.19970963088374052	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	17152	0.19813856946540478	No Hit
CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC	16319	0.1885158182780982	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	14704	0.169859463935361	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAA	14442	0.16683286032062591	No Hit
CTAGGCAGGTGCTGGGGGCTTCCGAGACAATC	14363	0.1659202584673279	No Hit
CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG	11644	0.13451058202280627	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA	11513	0.13299728021543872	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10421	0.12038258117997803	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	9693	0.11197278182300421	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA	9308	0.10752529177845077	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAGTC	50	6.2937033E-10	145.69958	44
CTATCAT	5195	0.0	135.55623	44
CTATCGT	140	0.0	112.74373	44
ATATCGG	195	0.0	99.623634	44
AACGACA	1095	0.0	87.90074	43
CCGTTAT	85	2.518027E-8	85.705635	44
ACATTGG	1155	0.0	83.04665	44
ACTTCTA	2085	0.0	73.95622	44
GTGTTAG	1760	0.0	72.80373	43
TCGCAAA	1295	0.0	65.4992	43
TAACGGT	20	1.1655391E-4	64.763016	41
CCTATCA	5695	0.0	63.273197	43
CATATCG	145	0.0	62.23145	43
CGATATC	60	2.2500899E-8	60.708157	44
TTAATCG	100	1.8189894E-12	60.15707	43
TACGTTA	70	1.231092E-8	60.15707	43
ACGACAC	630	0.0	59.744537	44
TGCACCG	1425	0.0	59.523834	43
CACGAAT	105	0.0	57.700737	42
TAACGAT	175	0.0	57.700737	42