##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840936.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8656568 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.31173462739506 39.0 37.0 39.0 34.0 39.0 2 37.84130165673047 39.0 38.0 39.0 35.0 39.0 3 38.02307843015846 39.0 38.0 39.0 35.0 40.0 4 38.57754089149418 39.0 38.0 41.0 35.0 41.0 5 39.254397470221456 40.0 39.0 41.0 35.0 41.0 6 39.22093894485667 40.0 39.0 41.0 35.0 41.0 7 39.244173557003194 40.0 39.0 41.0 35.0 41.0 8 39.171376115800165 40.0 38.0 41.0 35.0 41.0 9 39.062800407736646 40.0 38.0 41.0 35.0 41.0 10 38.98066508574761 40.0 38.0 41.0 35.0 41.0 11 38.74760563308692 40.0 38.0 41.0 35.0 41.0 12 38.78679853262864 40.0 38.0 41.0 35.0 41.0 13 38.69664583007954 40.0 38.0 41.0 35.0 41.0 14 38.65426390689705 40.0 38.0 41.0 35.0 41.0 15 38.593126629398625 40.0 38.0 41.0 35.0 41.0 16 38.55178126019457 40.0 38.0 41.0 35.0 41.0 17 38.51216117057014 40.0 37.0 41.0 35.0 41.0 18 38.565044484141985 40.0 38.0 41.0 35.0 41.0 19 38.639337321672976 40.0 38.0 41.0 35.0 41.0 20 38.62301688151702 40.0 37.0 41.0 35.0 41.0 21 38.54887514312831 40.0 37.0 41.0 35.0 41.0 22 38.44939899969595 40.0 37.0 41.0 35.0 41.0 23 38.321892463618376 40.0 37.0 41.0 34.0 41.0 24 38.12249993299885 40.0 36.0 41.0 34.0 41.0 25 38.05797550637374 40.0 36.0 41.0 34.0 41.0 26 37.99331507561058 40.0 36.0 41.0 33.0 41.0 27 37.91222449235032 40.0 35.0 41.0 33.0 41.0 28 37.801110295467055 39.0 35.0 41.0 33.0 41.0 29 37.7102847230884 39.0 35.0 41.0 33.0 41.0 30 37.619185552334294 39.0 35.0 41.0 33.0 41.0 31 37.45279589373969 39.0 35.0 41.0 33.0 41.0 32 37.33623356741944 39.0 35.0 41.0 33.0 41.0 33 37.189622873322215 38.0 35.0 41.0 33.0 41.0 34 37.11654607796587 38.0 35.0 41.0 33.0 41.0 35 36.96202446233945 38.0 35.0 40.0 33.0 41.0 36 36.88934749178468 37.0 35.0 40.0 33.0 41.0 37 36.80803238408552 37.0 35.0 40.0 33.0 41.0 38 36.75034345955293 37.0 35.0 40.0 33.0 41.0 39 36.635128827791064 37.0 35.0 40.0 33.0 41.0 40 36.53887186478844 36.0 35.0 40.0 33.0 41.0 41 36.43089801839124 36.0 35.0 40.0 33.0 41.0 42 36.30442939154963 36.0 35.0 40.0 32.0 41.0 43 36.185687414445695 35.0 35.0 40.0 32.0 41.0 44 36.05931287909034 35.0 35.0 40.0 32.0 41.0 45 35.85827109802677 35.0 35.0 39.0 31.0 41.0 46 35.58719287282283 35.0 34.0 39.0 31.0 41.0 47 35.39337848557974 35.0 34.0 39.0 30.0 41.0 48 35.39667443954884 35.0 34.0 39.0 30.0 41.0 49 35.45477880194377 35.0 34.0 39.0 31.0 41.0 50 35.85122330951262 36.0 34.0 39.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 23.0 21 74.0 22 169.0 23 371.0 24 874.0 25 1953.0 26 3911.0 27 7755.0 28 15855.0 29 31198.0 30 58427.0 31 105480.0 32 177966.0 33 310359.0 34 552839.0 35 536612.0 36 962097.0 37 1340967.0 38 1425239.0 39 1576760.0 40 1547633.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 43.15183569285195 17.059820935964463 39.78834337118359 2 26.05948454399018 21.394714394896454 30.53497644794103 22.010824613172332 3 24.49654412695655 19.372226961077416 28.87709078239783 27.254138129568204 4 23.020682099418615 21.13789206068733 32.62309035174217 23.218335488151887 5 22.54668362796896 22.08681315736213 29.87426425807549 25.49223895659342 6 22.63430495780776 24.17929368775247 26.942444164939268 26.243957189500506 7 29.668339693051564 21.695630416118718 21.39233469892456 27.243695191905154 8 26.505908577163606 21.953088106048494 22.66748207834791 28.87352123843999 9 27.802877537610748 23.017736359259235 24.108688339304905 25.070697763825113 10 29.122753959767888 19.717202013546245 23.752230676175593 27.407813350510274 11 27.401944974035903 21.96576056469492 24.74898828265428 25.883306178614895 12 29.72214854662957 22.42689019482086 22.54775795673297 25.303203301816605 13 28.734043329873916 21.641602076019044 23.814102771444755 25.810251822662284 14 26.454618042623824 22.133806376845882 22.263615326535874 29.147960253994427 15 23.96441638302847 25.972625641016162 24.19131923875605 25.871638737199316 16 27.17768750849066 25.477429392341165 19.531204514306364 27.813678584861805 17 27.002098291147252 28.04761656120532 19.58474767367391 25.36553747397352 18 26.134687557470816 22.862894394175612 19.82521248605683 31.177205562296745 19 29.22530037308088 22.658540890570027 21.205620980508673 26.91053775584042 20 27.466739705620057 22.866094276623254 22.543818751264936 27.123347266491756 21 27.22510814909558 26.798403247106705 19.28734343679851 26.689145166999207 22 28.60507767050406 24.758276028097974 21.63323848435084 25.003407817047123 23 30.975959525761247 25.23653715883708 20.531554768587274 23.255948546814395 24 29.71811692578398 25.06499111426145 22.416193114869543 22.800698845085027 25 28.57595940743518 27.830136230296205 20.513636128127853 23.080268234140764 26 29.347747719865524 28.529456140492787 20.410631120027002 21.712165019614684 27 28.26506492279303 27.441000165039455 21.28795420798109 23.00598070418642 28 27.810493345263716 25.693001615545754 19.898229650922307 26.598275388268227 29 26.779757439427254 27.68462979863861 20.464905567778917 25.07070719415522 30 29.024376796545504 26.938407159509666 20.02634832652096 24.01086771742387 31 26.867870593200056 28.548646555053075 20.70754125153588 23.87594160021099 32 27.644248112838234 25.54830169268409 23.0641127988992 23.743337395578482 33 24.730780860353388 25.223379275064282 23.046755916510325 26.999083948072006 34 27.146324107486347 27.205969772688192 22.050474299426245 23.597231820399216 35 24.644610731883766 25.52944371062555 21.564236185339066 28.261709372151618 36 25.21164131624305 25.73021568536124 25.016539782348772 24.041603216046934 37 23.943749122084732 27.99519173541889 24.273111673628964 23.78794746886742 38 25.149123531284257 25.5110674295306 23.59927634333808 25.74053269584706 39 27.584189385330287 26.605528316998605 21.237758653668205 24.572523644002903 40 26.708602500657147 26.911246942269184 21.131434286502135 25.248716270571535 41 25.93182511676371 26.544017280977112 21.556435488606184 25.96772211365299 42 24.275772564443827 28.902352621786086 21.474040377955674 25.347834435814416 43 26.971768820875415 26.220726626054386 22.00443354875778 24.803071004312418 44 27.396070444062804 27.107540238765665 20.75589543121205 24.740493885959484 45 25.24928978981904 25.6179458853648 23.16613073826334 25.966633586552817 46 24.774263327404704 26.430482782931946 22.13810508099793 26.657148808665415 47 24.939274362664396 26.712587751570886 22.84422096872138 25.503916917043334 48 24.40190813314573 27.785665186218537 20.90356990146113 26.908856779174606 49 24.839560479740005 27.29416033193947 21.08857695928876 26.777702229031764 50 22.378463312215267 30.87593245094614 24.756365967858564 21.98923826898002 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 256275.0 1 219512.0 2 145097.5 3 100458.5 4 85553.0 5 58516.0 6 30891.0 7 23856.5 8 26380.5 9 28441.5 10 29024.5 11 28214.5 12 26820.5 13 25387.5 14 26122.0 15 28317.5 16 31120.5 17 32581.5 18 32053.0 19 33298.0 20 36762.5 21 44639.5 22 55373.0 23 67432.0 24 76343.5 25 79336.0 26 82180.0 27 86597.0 28 90371.5 29 100054.5 30 116360.0 31 134546.5 32 154048.0 33 161739.5 34 174701.5 35 194807.0 36 200305.0 37 202105.0 38 207885.0 39 218269.5 40 231980.0 41 258316.5 42 289067.0 43 294891.5 44 290414.0 45 293304.0 46 309737.0 47 327619.0 48 350353.0 49 395535.0 50 457975.0 51 501816.5 52 505765.0 53 499925.5 54 506548.0 55 514897.0 56 521951.0 57 531822.0 58 536563.5 59 530859.5 60 528629.5 61 539638.5 62 533588.5 63 522587.5 64 505310.0 65 474435.0 66 446256.5 67 423798.0 68 427868.0 69 426840.0 70 371074.0 71 308008.0 72 271284.0 73 245247.0 74 228382.0 75 210501.0 76 182914.5 77 139145.0 78 102494.0 79 88243.0 80 75368.0 81 55194.5 82 38827.0 83 31622.5 84 27538.5 85 23030.5 86 18632.0 87 14741.0 88 8561.0 89 3857.0 90 2221.0 91 1382.5 92 963.5 93 845.5 94 624.0 95 309.0 96 203.5 97 202.0 98 166.0 99 130.0 100 130.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 67803.0 25 58676.0 26 53328.0 27 63505.0 28 67217.0 29 75305.0 30 69403.0 31 65436.0 32 86133.0 33 59240.0 34 61681.0 35 49354.0 36 41316.0 37 50500.0 38 55372.0 39 51358.0 40 64705.0 41 65086.0 42 88054.0 43 126949.0 44 355115.0 45 740132.0 46 951536.0 47 1039975.0 48 1405015.0 49 1453148.0 50 1391226.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.777256032967497 #Duplication Level Percentage of deduplicated Percentage of total 1 74.90074066386119 13.315296438403603 2 11.415514280389074 4.0587304022094655 3 3.849798577337287 2.0531656495403694 4 1.7991482990539993 1.279356798142437 5 1.0875355108880338 0.9666698611000345 6 0.7502810905998931 0.8002763426573032 7 0.5267692956588605 0.6555158847463464 8 0.40622313018093087 0.5777226073391916 9 0.3145315449283059 0.5032357024171782 >10 2.8758069004757183 12.099199437362945 >50 1.2212067990132545 15.646502602258018 >100 0.7681233410902879 23.58803715813436 >500 0.04933441071641747 6.041481911950095 >1k 0.030465472753166165 10.08571041541643 >5k 0.002555168682523614 3.2571024094685463 >10k+ 0.0019655143711720105 5.071996378853692 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAA 17311 0.19997532509419438 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 17288 0.19970963088374052 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 17152 0.19813856946540478 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC 16319 0.1885158182780982 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 14704 0.169859463935361 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 14442 0.16683286032062591 No Hit CTAGGCAGGTGCTGGGGGCTTCCGAGACAATC 14363 0.1659202584673279 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG 11644 0.13451058202280627 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 11513 0.13299728021543872 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10421 0.12038258117997803 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9693 0.11197278182300421 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 9308 0.10752529177845077 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.05181037103849932 0.0 0.0 0.0 0.0 2 0.12239261564167231 0.0 0.0 0.0 0.0 3 0.15711769375577017 0.0 0.0 0.0 0.0 4 0.18778804717989855 0.0 0.0 0.0 0.0 5 0.21703751417420852 0.0 0.0 0.0 0.0 6 0.2543040151709084 0.0 0.0 0.0 0.0 7 0.28135861694842573 0.0 0.0 0.0 0.0 8 0.3069345726851565 0.0 0.0 0.0 0.0 9 0.3320715553785288 0.0 0.0 0.0 0.0 10 0.3569197400170599 0.0 0.0 0.0 0.0 11 0.3823801765318542 0.0 0.0 0.0 0.0 12 0.4086261437558164 0.0 0.0 0.0 0.0 13 0.4360041993547558 0.0 0.0 0.0 0.0 14 0.4572943919576442 0.0 0.0 0.0 0.0 15 0.48067548247758235 0.0 0.0 0.0 1.1551922193645334E-5 16 0.4991239022208339 0.0 0.0 0.0 1.1551922193645334E-5 17 0.5225858561961276 0.0 0.0 0.0 6.9311533161872E-5 18 0.5467293735808464 0.0 0.0 0.0 6.9311533161872E-5 19 0.5670954124082431 0.0 0.0 0.0 6.9311533161872E-5 20 0.587161101258605 0.0 0.0 0.0 6.9311533161872E-5 21 0.6083935342505251 0.0 0.0 0.0 6.9311533161872E-5 22 0.6276274847029446 0.0 0.0 0.0 6.9311533161872E-5 23 0.6484440484958935 0.0 0.0 0.0 6.9311533161872E-5 24 0.6687638796345157 0.0 0.0 0.0 6.9311533161872E-5 25 0.6915904778891588 0.0 0.0 0.0 6.9311533161872E-5 26 0.7166812528937565 0.0 0.0 0.0 6.9311533161872E-5 27 0.737347641698188 0.0 0.0 0.0 6.9311533161872E-5 28 0.7587302496786256 0.0 0.0 0.0 6.9311533161872E-5 29 0.7806904537687454 0.0 0.0 0.0 6.9311533161872E-5 30 0.8041639596662327 0.0 0.0 0.0 6.9311533161872E-5 31 0.8274872905752025 0.0 0.0 0.0 6.9311533161872E-5 32 0.8487890351002846 0.0 0.0 0.0 6.9311533161872E-5 33 0.8690280027835512 0.0 0.0 0.0 6.9311533161872E-5 34 0.8886893743571356 0.0 0.0 0.0 6.9311533161872E-5 35 0.9036606655200999 0.0 0.0 0.0 6.9311533161872E-5 36 0.9182622951728676 0.0 0.0 0.0 6.9311533161872E-5 37 0.9284857463142437 0.0 0.0 0.0 6.9311533161872E-5 38 0.9369995129709603 0.0 0.0 0.0 6.9311533161872E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGTC 50 6.2937033E-10 145.69958 44 CTATCAT 5195 0.0 135.55623 44 CTATCGT 140 0.0 112.74373 44 ATATCGG 195 0.0 99.623634 44 AACGACA 1095 0.0 87.90074 43 CCGTTAT 85 2.518027E-8 85.705635 44 ACATTGG 1155 0.0 83.04665 44 ACTTCTA 2085 0.0 73.95622 44 GTGTTAG 1760 0.0 72.80373 43 TCGCAAA 1295 0.0 65.4992 43 TAACGGT 20 1.1655391E-4 64.763016 41 CCTATCA 5695 0.0 63.273197 43 CATATCG 145 0.0 62.23145 43 CGATATC 60 2.2500899E-8 60.708157 44 TTAATCG 100 1.8189894E-12 60.15707 43 TACGTTA 70 1.231092E-8 60.15707 43 ACGACAC 630 0.0 59.744537 44 TGCACCG 1425 0.0 59.523834 43 CACGAAT 105 0.0 57.700737 42 TAACGAT 175 0.0 57.700737 42 >>END_MODULE