##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840935.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5145044 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.251086288086164 39.0 37.0 39.0 34.0 39.0 2 37.78842824279054 39.0 38.0 39.0 35.0 39.0 3 37.917739284639744 39.0 38.0 39.0 35.0 39.0 4 38.47131297613781 39.0 38.0 40.0 35.0 41.0 5 39.0680151617751 40.0 38.0 41.0 35.0 41.0 6 39.07737076689723 40.0 38.0 41.0 35.0 41.0 7 39.03682378615227 40.0 38.0 41.0 35.0 41.0 8 38.94600920808452 40.0 38.0 41.0 35.0 41.0 9 38.79921571127477 40.0 38.0 41.0 35.0 41.0 10 38.658685717750906 40.0 38.0 41.0 35.0 41.0 11 38.53337911201537 40.0 38.0 41.0 34.0 41.0 12 38.43770276794523 40.0 38.0 41.0 34.0 41.0 13 38.269826069514664 40.0 37.0 41.0 34.0 41.0 14 38.1870469912405 40.0 37.0 41.0 34.0 41.0 15 38.19964707784812 40.0 37.0 41.0 34.0 41.0 16 38.11872532091076 40.0 37.0 41.0 34.0 41.0 17 38.13704858500724 40.0 37.0 41.0 34.0 41.0 18 38.133646281742195 40.0 37.0 41.0 34.0 41.0 19 38.20640873042097 40.0 37.0 41.0 34.0 41.0 20 38.176903054667754 40.0 37.0 41.0 34.0 41.0 21 38.135477364236344 40.0 36.0 41.0 34.0 41.0 22 37.98533481929406 40.0 36.0 41.0 33.0 41.0 23 37.79144085065162 39.0 35.0 41.0 33.0 41.0 24 37.55633984859993 39.0 35.0 41.0 33.0 41.0 25 37.43407033007602 39.0 35.0 41.0 33.0 41.0 26 37.330442385280705 39.0 35.0 41.0 33.0 41.0 27 37.20662099641871 38.0 35.0 41.0 33.0 41.0 28 37.081655082717056 38.0 35.0 40.0 33.0 41.0 29 36.926946391910946 38.0 35.0 40.0 33.0 41.0 30 36.79548152347176 38.0 35.0 40.0 32.0 41.0 31 36.60304833531526 37.0 35.0 40.0 32.0 41.0 32 36.437661882520274 37.0 35.0 40.0 32.0 41.0 33 36.35260679695562 37.0 35.0 40.0 32.0 41.0 34 36.237439043429546 36.0 35.0 40.0 32.0 41.0 35 36.04362784467556 36.0 35.0 40.0 31.0 41.0 36 35.969803083118926 36.0 35.0 40.0 31.0 41.0 37 35.877716265116135 35.0 34.0 39.0 31.0 41.0 38 35.83518188330778 35.0 34.0 39.0 31.0 41.0 39 35.725767462645265 35.0 34.0 39.0 31.0 41.0 40 35.62285138045418 35.0 34.0 39.0 31.0 41.0 41 35.505883113880266 35.0 34.0 39.0 31.0 41.0 42 35.42222078727829 35.0 34.0 39.0 31.0 41.0 43 35.28898581231958 35.0 34.0 38.0 31.0 41.0 44 35.106286726366086 35.0 34.0 38.0 31.0 41.0 45 34.955452083857274 35.0 34.0 37.0 30.0 40.0 46 34.633824909726314 35.0 33.0 37.0 30.0 40.0 47 34.50788111034643 35.0 33.0 37.0 29.0 40.0 48 34.452647216110286 35.0 33.0 37.0 29.0 40.0 49 34.528966960407516 35.0 33.0 37.0 30.0 40.0 50 34.66129036252901 35.0 33.0 37.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 6.0 21 20.0 22 89.0 23 230.0 24 519.0 25 1260.0 26 2821.0 27 6300.0 28 13502.0 29 27176.0 30 50227.0 31 87563.0 32 144334.0 33 242012.0 34 403040.0 35 450375.0 36 692682.0 37 874723.0 38 841039.0 39 787218.0 40 519907.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 41.873072416873406 17.636253450893715 40.49067413223288 2 27.353216026918332 16.605086370495567 31.018957272279884 25.022740330306213 3 22.199576913239227 16.528974290598875 30.45505538922505 30.816393406936847 4 21.03921754605014 16.31228032257839 34.54178428794778 28.106717843423688 5 22.587076028893048 20.808743326587685 29.733215109530647 26.87096553498862 6 26.360999050736982 18.340601168814104 27.668840149860717 27.62955963058819 7 28.96027711327639 19.539230373928778 21.840182513502317 29.660309999292522 8 27.710744553399348 17.594251866456343 23.136692319832445 31.558311260311868 9 30.371538124844022 17.205022930804866 24.50379433101058 27.919644613340527 10 29.68744290622199 15.89504385190875 24.629779648142954 29.787733593726312 11 32.995908295439264 17.114100481939513 22.972203930617503 26.91778729200372 12 32.198325223263396 18.10089476397092 22.68316850157161 27.017611511194072 13 30.390410655380208 16.61494051362826 24.797727677353194 28.19692115363834 14 27.791560188795277 20.417687390039813 22.12725488839357 29.663497532771345 15 27.82145303324908 20.73053213927811 21.28629026301816 30.16172456445465 16 28.18450143477879 21.110528889548856 20.873757347847754 29.831212327824602 17 28.831706784237415 21.646073386350047 19.416432590275225 30.105787239137317 18 28.562710056512636 19.20290671955381 20.173743898011367 32.06063932592219 19 30.312976915260588 17.634659684154304 22.187720843592395 29.86464255699271 20 30.216748389323783 17.899691431210307 23.176808594834174 28.706751584631736 21 31.24014099782237 21.762262868888975 19.06807794063569 27.92951819265297 22 32.1974117228152 20.237455695228263 21.820843514652157 25.744289067304383 23 32.542656583694914 19.93195782193505 21.541876026716196 25.983509567653844 24 32.544988925264775 20.45292518392457 22.52519123257255 24.476894658238102 25 31.585300352969142 21.546774142663963 21.395224521332263 25.472700983034635 26 32.39243377003982 20.162409679244433 21.64277445791765 25.802382092798094 27 31.2177239261663 20.901850600636322 21.131827539500524 26.748597933696853 28 31.54348287207524 19.77344713141749 22.449590680954422 26.23347931555285 29 32.092616847488756 21.764730537685256 21.62408779251856 24.51856482230743 30 32.37127154625956 21.454991270867954 20.458994074526277 25.714743108346212 31 29.878691559561737 21.328263075468946 22.21676450239386 26.57628086257545 32 28.587259264117264 19.82821341542144 24.11867661616089 27.465850704300404 33 28.086375346881148 19.774932228144028 24.089103817478154 28.049588607496666 34 30.379122525941764 19.483957391138098 24.225086597778052 25.911833485142083 35 27.677882896692278 20.308474906509204 23.680329553863803 28.33331264293471 36 29.43653175716756 20.006090540525935 24.546488900869353 26.010888801437147 37 28.094623087120347 22.249543276485966 24.22427390826283 25.431559728130864 38 29.10940845971072 20.893535296496417 21.964095628672442 28.032960615120423 39 29.150492589026623 22.16764286683934 21.649213565808477 27.032650978325563 40 28.38700487763167 21.05888735203343 22.510834031171385 28.043273739163517 41 28.64458151384665 20.639265448412672 21.53318899906214 29.182964038678534 42 27.153059404016012 21.37064956805229 23.481281970033045 27.995009057898656 43 28.455398633093754 20.873900406497675 23.076140746172218 27.594560214236353 44 28.480161075961085 21.871255356511774 22.139303823771048 27.50927974375609 45 29.343627394172188 18.775921688070817 23.674095887585047 28.20635503017194 46 28.661857655540864 21.117218092194964 22.45268215744444 27.768242094819733 47 28.84442513001214 20.809404235518368 22.163567266051004 28.18260336841849 48 26.393564781168244 22.061767509280568 21.206727525151823 30.337940184399372 49 28.290411598455982 21.926291254828026 21.486811436956085 28.296485709759907 50 26.046385483978828 24.005379606535776 23.600546877128497 26.3476880323569 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 29654.0 1 25345.0 2 30108.5 3 36281.5 4 30021.5 5 20635.0 6 12394.5 7 11427.0 8 14119.0 9 15988.0 10 16301.0 11 14845.0 12 12333.0 13 10707.0 14 10783.0 15 11409.5 16 11687.0 17 12573.5 18 13797.5 19 14119.5 20 13877.0 21 15611.0 22 18706.5 23 21486.0 24 23180.0 25 23952.0 26 25181.0 27 26406.5 28 27529.5 29 34517.5 30 43763.0 31 47438.5 32 49632.5 33 51142.5 34 55230.5 35 61334.0 36 64200.5 37 66985.0 38 71638.5 39 81868.5 40 94088.0 41 106518.5 42 125095.0 43 136509.5 44 132758.0 45 133807.0 46 151757.0 47 183877.5 48 215590.0 49 229467.5 50 245414.5 51 272688.5 52 294900.0 53 306233.5 54 317050.0 55 329931.5 56 348579.5 57 374920.5 58 389513.5 59 387668.0 60 389098.5 61 394835.5 62 390425.5 63 388464.0 64 380895.5 65 363599.5 66 344100.0 67 322357.0 68 306982.0 69 290919.5 70 267769.0 71 246484.0 72 229184.5 73 210705.5 74 187689.5 75 163386.0 76 136767.0 77 104981.0 78 84856.0 79 74926.0 80 60803.5 81 45566.0 82 35021.5 83 27228.0 84 21936.5 85 18253.0 86 14177.0 87 10959.0 88 6629.5 89 3517.5 90 2376.0 91 1309.0 92 803.0 93 759.5 94 650.0 95 402.5 96 235.0 97 218.0 98 109.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 41765.0 25 34123.0 26 25172.0 27 27848.0 28 29743.0 29 32865.0 30 34909.0 31 39309.0 32 48765.0 33 39429.0 34 38509.0 35 33814.0 36 30508.0 37 34367.0 38 35159.0 39 34362.0 40 38930.0 41 38903.0 42 52418.0 43 79564.0 44 215420.0 45 459025.0 46 577544.0 47 622476.0 48 820859.0 49 871764.0 50 807494.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.458096818903385 #Duplication Level Percentage of deduplicated Percentage of total 1 79.71813020363103 17.90317486335092 2 9.395443412685314 4.220075556372296 3 2.9903785717874287 2.014746344711283 4 1.3768430177067148 1.2368509518435402 5 0.806456226606108 0.9055736008663731 6 0.5491099802922702 0.739917906097796 7 0.38920293818599544 0.6118530087587929 8 0.2973740956325471 0.534276498491966 9 0.2438437909671482 0.4928640719605788 >10 2.3802529550639697 12.42952668765254 >50 1.0179484343895993 16.679445044656585 >100 0.7818608179374043 29.72589060172495 >500 0.0381821593075734 5.684879646138014 >1k 0.014474282613328478 5.959615481865721 >5k 4.99113193563051E-4 0.8613097355086509 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 7809 0.15177712765916093 No Hit CTTTTCCAAGCGGCTGCCGAAGATGGCGGAGG 7559 0.1469180827219359 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.017162146718278794 0.0 0.0 0.0 0.0 2 0.03350797388710378 0.0 0.0 0.0 0.0 3 0.04616092690363775 0.0 0.0 0.0 0.0 4 0.057239549360510816 0.0 0.0 0.0 0.0 5 0.06825986327813717 0.0 0.0 0.0 0.0 6 0.08369218999876386 0.0 0.0 0.0 0.0 7 0.09665612189128023 0.0 0.0 0.0 0.0 8 0.1077153081684044 0.0 0.0 0.0 0.0 9 0.11927983511899995 0.0 0.0 0.0 0.0 10 0.1288813079149566 0.0 0.0 0.0 0.0 11 0.13766646116145945 0.0 0.0 0.0 0.0 12 0.1475206042941518 0.0 0.0 0.0 0.0 13 0.15770516248257546 0.0 0.0 0.0 0.0 14 0.16963897684840012 0.0 0.0 0.0 0.0 15 0.18176715301171378 0.0 0.0 0.0 1.9436179748900106E-5 16 0.19302070108632696 0.0 0.0 0.0 1.9436179748900106E-5 17 0.20431312152043793 0.0 0.0 0.0 1.9436179748900106E-5 18 0.22141695969947 0.0 0.0 0.0 1.9436179748900106E-5 19 0.23298148665006557 0.0 0.0 0.0 1.9436179748900106E-5 20 0.24324378955748482 0.0 0.0 0.0 1.9436179748900106E-5 21 0.2567519344829704 0.0 0.0 0.0 1.9436179748900106E-5 22 0.2672863439068743 0.0 0.0 0.0 1.9436179748900106E-5 23 0.278617636700483 0.0 0.0 0.0 1.9436179748900106E-5 24 0.28967682297760716 0.0 0.0 0.0 1.9436179748900106E-5 25 0.30310722318409716 0.0 0.0 0.0 1.9436179748900106E-5 26 0.31888940114020403 0.0 0.0 0.0 1.9436179748900106E-5 27 0.33183389685297154 0.0 0.0 0.0 1.9436179748900106E-5 28 0.3458668186316774 0.0 0.0 0.0 1.9436179748900106E-5 29 0.35842259074946686 0.0 0.0 0.0 1.9436179748900106E-5 30 0.37183355477620794 0.0 0.0 0.0 1.9436179748900106E-5 31 0.386216327790394 0.0 0.0 0.0 1.9436179748900106E-5 32 0.400035451591862 0.0 0.0 0.0 1.9436179748900106E-5 33 0.41408780955031677 0.0 0.0 0.0 1.9436179748900106E-5 34 0.42536079380467884 0.0 0.0 0.0 1.9436179748900106E-5 35 0.434476362106913 0.0 0.0 0.0 1.9436179748900106E-5 36 0.4425423767027065 0.0 0.0 0.0 1.9436179748900106E-5 37 0.45000586972628415 0.0 0.0 0.0 1.9436179748900106E-5 38 0.4557395427522097 0.0 0.0 0.0 1.9436179748900106E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCAT 1595 0.0 173.18532 44 CGCATTA 15 0.004551006 168.17691 44 CAAACGA 100 0.0 126.13268 44 ACGACAC 390 0.0 119.664345 44 CCACTTA 465 0.0 113.92629 44 TCTATGA 90 2.564775E-10 98.103195 44 CCAGAAT 765 0.0 95.63001 44 ACCCATA 40 6.729264E-4 94.59952 44 CGAATCA 45 3.4742698E-10 94.4248 43 CAAATAG 130 0.0 87.322624 44 CGAATAA 20 3.6493304E-5 81.867874 42 CGTCACA 35 1.0750227E-9 81.867874 42 GACAATA 110 1.2569217E-9 80.26625 44 ATCACGT 110 1.2569217E-9 80.26625 44 AACGACA 575 0.0 80.23176 43 ACTTCTA 915 0.0 79.95296 44 CCTATCA 1705 0.0 77.9687 43 CGCTACC 775 0.0 69.9833 44 CCCTATC 2075 0.0 69.83428 42 TGTGTTA 1525 0.0 68.98376 42 >>END_MODULE