##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840932.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1607146 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.940535582952634 39.0 37.0 39.0 33.0 39.0 2 37.52696519171251 39.0 37.0 39.0 35.0 39.0 3 37.78723650495972 39.0 37.0 39.0 35.0 40.0 4 38.46034834420768 39.0 38.0 41.0 35.0 41.0 5 38.88695550995367 40.0 38.0 41.0 35.0 41.0 6 38.877673216994594 40.0 38.0 41.0 35.0 41.0 7 38.767953253780306 40.0 38.0 41.0 35.0 41.0 8 38.73438878608415 40.0 38.0 41.0 35.0 41.0 9 38.57884037915659 40.0 38.0 41.0 35.0 41.0 10 38.44234313497343 40.0 38.0 41.0 34.0 41.0 11 38.36168711492297 40.0 37.0 41.0 34.0 41.0 12 38.23380327611804 40.0 37.0 41.0 34.0 41.0 13 38.11571568482266 40.0 37.0 41.0 34.0 41.0 14 38.09242408592623 40.0 37.0 41.0 34.0 41.0 15 38.07596260700646 40.0 37.0 41.0 34.0 41.0 16 38.04546693330911 40.0 37.0 41.0 34.0 41.0 17 38.063072676657875 40.0 36.0 41.0 34.0 41.0 18 38.12338766981967 40.0 36.0 41.0 34.0 41.0 19 38.23302985540828 40.0 36.0 41.0 34.0 41.0 20 38.20423035617175 40.0 36.0 41.0 34.0 41.0 21 38.07244581388374 40.0 36.0 41.0 34.0 41.0 22 37.97746377740417 40.0 35.0 41.0 33.0 41.0 23 37.8082545083023 39.0 35.0 41.0 33.0 41.0 24 37.593223639918214 39.0 35.0 41.0 33.0 41.0 25 37.46842107901121 39.0 35.0 41.0 33.0 41.0 26 37.31676782646007 39.0 35.0 41.0 33.0 41.0 27 37.260177895195895 39.0 35.0 41.0 33.0 41.0 28 37.172395789944936 38.0 35.0 41.0 33.0 41.0 29 36.93993332752979 38.0 35.0 41.0 33.0 41.0 30 36.84680671456648 38.0 35.0 40.0 33.0 41.0 31 36.65401858953492 37.0 35.0 40.0 32.0 41.0 32 36.4917959087531 37.0 35.0 40.0 32.0 41.0 33 36.38270992790597 37.0 35.0 40.0 32.0 41.0 34 36.31888883666648 36.0 35.0 40.0 32.0 41.0 35 36.09083007677762 36.0 35.0 40.0 32.0 41.0 36 36.027814281071265 35.0 35.0 40.0 32.0 41.0 37 35.9805402819331 35.0 35.0 39.0 32.0 41.0 38 35.91968746926747 35.0 35.0 39.0 32.0 41.0 39 35.79842944805381 35.0 35.0 39.0 32.0 41.0 40 35.670869152708185 35.0 34.0 39.0 31.0 41.0 41 35.600190571888916 35.0 34.0 39.0 31.0 41.0 42 35.481588292759284 35.0 34.0 39.0 31.0 41.0 43 35.358323083608035 35.0 34.0 38.0 31.0 41.0 44 35.18199606058784 35.0 34.0 38.0 31.0 41.0 45 34.99390158126047 35.0 34.0 38.0 30.0 40.0 46 34.71669663608128 35.0 33.0 37.0 30.0 40.0 47 34.564098284209656 35.0 33.0 37.0 30.0 40.0 48 34.66037577090141 35.0 33.0 37.0 30.0 40.0 49 34.44317953882114 35.0 33.0 37.0 29.0 40.0 50 34.86065158006026 35.0 33.0 38.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 7.0 21 15.0 22 51.0 23 109.0 24 233.0 25 605.0 26 1227.0 27 2508.0 28 4940.0 29 9222.0 30 16858.0 31 29654.0 32 48615.0 33 82620.0 34 141276.0 35 131255.0 36 194058.0 37 253484.0 38 264378.0 39 256055.0 40 169975.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 38.91743500590488 16.84588705693198 44.236677937163144 2 24.945586773074755 18.2088621693362 30.391887233642745 26.4536638239463 3 21.129629790946186 17.111450982051412 30.961779452520183 30.79713977448222 4 19.78793463692782 17.777227457866303 35.186224524716486 27.248613380489388 5 21.87069500841865 17.654898808197885 34.61757674784992 25.856829435533545 6 26.493361524093018 19.108967075797718 27.866354394684738 26.53131700542452 7 29.968030284740777 18.094746836939517 20.627684105862194 31.30953877245751 8 29.27948052012698 19.07636269511295 23.219919036602775 28.424237748157292 9 27.230133416627982 18.330257487496468 25.330741575438697 29.10886752043685 10 28.969863347822788 16.963237938556922 25.13256418520782 28.934334528412474 11 31.139423549571728 18.248622091583467 22.817279823986123 27.794674534858686 12 28.918343448572813 18.901145259982602 21.70611755248123 30.474393738963357 13 27.252533372823628 19.670023756397985 26.172793262093176 26.90464960868521 14 29.767861787292503 20.25024484396564 21.069212131318498 28.91268123742336 15 27.371253140660524 20.11764954770755 22.11180564802451 30.399291663607414 16 27.81489671753531 23.289421122909804 19.719303660028398 29.17637849952649 17 28.01761632110586 20.563595342302442 21.576633361250316 29.842154975341384 18 27.797598973584233 20.41805784913132 19.636548266305613 32.14779491097884 19 30.45591377510195 20.454893332653036 21.074625454065778 28.014567438179235 20 30.136776621414608 19.296068932131867 20.933070175329433 29.634084271124088 21 30.706171063487698 23.205359065075605 18.223857695567172 27.864612175869524 22 31.052125942509267 22.307929708937458 20.71510615712574 25.924838191427536 23 30.936455057598998 21.487095758568294 21.208651858636365 26.367797325196342 24 32.56443409621777 20.670866243639345 22.066881291432143 24.697818368710745 25 32.936769482146794 21.863534754104936 21.784029852242426 23.415665911505844 26 31.816598019145697 22.046345110210932 21.599868438711532 24.53718843193184 27 31.577315039568482 21.719531191156 19.84835931462309 26.85479445465242 28 32.01915904461689 21.36168610784848 20.385546520523416 26.233608327011215 29 31.282996983864443 22.585363293271815 21.68692359293948 24.444716129924263 30 31.973257724651223 22.686599864677643 19.76408802397139 25.57605438669975 31 30.09918568655092 20.697295607843035 22.318789644122067 26.884729061483974 32 26.795703218540652 20.080269400341514 24.632370452874188 28.491656928243646 33 28.620007325800167 19.1941225249942 25.67081378855005 26.515056360655585 34 29.606330591215734 20.255151317361662 24.140079026474332 25.99843906494827 35 26.819777552194317 19.819143681926434 24.71347530872015 28.6476034571591 36 28.422957202354826 20.709999296366906 24.870749302230514 25.99629419904775 37 27.539621573542494 21.8771057383898 25.62363548152341 24.959637206544297 38 28.131564044044588 20.90232397255861 22.12728438058484 28.83882760281196 39 27.240173468022295 24.0030094735606 20.697777304418356 28.05903975399875 40 26.70175952051675 24.331480447138468 21.986964529973545 26.97979550237124 41 29.77959494811247 21.48382737651808 20.774969248627016 27.961608426742433 42 27.212542433995836 23.176403833279995 20.98569857293197 28.62535515979221 43 28.48237070838458 21.45315863743997 24.317679679217804 25.746790974957644 44 28.266260217080593 21.692049240478728 22.72985760017502 27.311832942265664 45 30.341217735963976 19.912380640264406 24.12693676967764 25.61946485409398 46 29.363126248232042 22.938151657083562 21.464704795343252 26.234017299341144 47 28.497434190828603 21.492707343357324 21.997106096913413 28.012752368900664 48 26.69377609615939 21.306742550999154 20.81499331690031 31.184488035941143 49 25.173463999312283 23.44660174303176 20.991702382852957 30.388231874802997 50 25.596915047698204 29.333936308690788 21.598943978292887 23.47020466531812 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 19509.0 1 13546.5 2 8194.0 3 7801.5 4 5849.5 5 4583.5 6 3376.0 7 2694.5 8 3172.5 9 3344.0 10 3146.0 11 2757.5 12 2376.0 13 2144.0 14 2041.5 15 2382.5 16 2730.0 17 2470.5 18 2034.0 19 2160.0 20 2528.5 21 2908.5 22 3654.0 23 4796.0 24 5383.0 25 5655.5 26 6435.0 27 7020.0 28 7423.5 29 7765.0 30 7786.5 31 8741.5 32 11925.5 33 15556.5 34 18068.5 35 18463.0 36 18448.5 37 20048.5 38 22510.0 39 26883.0 40 31941.5 41 38752.5 42 49033.0 43 58036.0 44 59618.5 45 55136.5 46 53864.5 47 58807.5 48 72360.5 49 83215.0 50 88655.5 51 93860.0 52 97304.0 53 106260.5 54 118307.0 55 122196.5 56 117729.0 57 116661.0 58 119714.5 59 121515.0 60 124785.5 61 129214.5 62 126029.0 63 115508.0 64 105430.0 65 96511.0 66 87637.0 67 82915.5 68 79048.0 69 74289.0 70 72133.5 71 68902.0 72 62408.5 73 56450.0 74 48494.0 75 41567.5 76 37918.5 77 30888.5 78 25534.5 79 24543.0 80 22390.5 81 17759.0 82 12764.0 83 9469.5 84 8076.5 85 5960.0 86 3744.0 87 2683.0 88 1813.5 89 1370.0 90 1349.0 91 1095.5 92 717.5 93 685.0 94 376.0 95 177.5 96 271.5 97 270.0 98 139.0 99 8.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 11018.0 25 9035.0 26 7174.0 27 7398.0 28 10257.0 29 10414.0 30 9692.0 31 9569.0 32 11936.0 33 10020.0 34 10326.0 35 8052.0 36 8215.0 37 9625.0 38 9707.0 39 9141.0 40 12542.0 41 11979.0 42 18000.0 43 32637.0 44 86631.0 45 168186.0 46 167025.0 47 233604.0 48 236389.0 49 324941.0 50 163633.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.591337562375795 #Duplication Level Percentage of deduplicated Percentage of total 1 70.10214345550557 6.723733217278473 2 10.738658382093954 2.0599619501939883 3 4.328242322792855 1.2454089950900333 4 2.3274758146556116 0.8929442482651031 5 1.4843309135671503 0.7118359423146094 6 1.0299662582297873 0.5927252436323406 7 0.7697217141455297 0.5167862552622212 8 0.5447594104443734 0.417997711668225 9 0.4676858574950272 0.4037159639145589 >10 3.755599833958977 7.846503373303633 >50 1.507115751222786 10.751989854306633 >100 2.7671847747950022 53.005091545015084 >500 0.1372481820280941 8.67942209049105 >1k 0.039213766293741174 5.809872003560464 >5k 6.53562771562353E-4 0.3420116057035907 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 5456 0.33948378056505135 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3647 0.22692400068195423 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 3538 0.22014179172271842 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC 2627 0.16345745812763746 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 2553 0.1588530226874223 No Hit CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG 2535 0.15773302487764024 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 2476 0.1540619209455768 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 2405 0.149644151806992 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGT 2182 0.13576862338580314 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 2179 0.1355819570841728 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 2124 0.13215974155428317 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2049 0.1274930840135246 No Hit AATTCGTGGAGAAAGAAATGGCTCC 2040 0.12693308510863358 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 1923 0.11965309934505017 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG 1802 0.11212422517929298 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 1747 0.10870200964940334 No Hit TTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1690 0.10515534991842683 No Hit CTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGAAAACTAC 1677 0.10434646261136199 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTT 1622 0.10092424708147238 No Hit CTTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGCTCTGGGTCCT 1609 0.10011535977440754 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.012382198008146118 0.0 0.0 0.0 0.0 2 0.024639951815205337 0.0 0.0 0.0 0.0 3 0.035591041510852156 0.0 0.0 0.0 0.0 4 0.044426579788021746 0.0 0.0 0.0 0.0 5 0.053635450668452024 0.0 0.0 0.0 0.0 6 0.06968875260866157 0.0 0.0 0.0 0.0 7 0.08250650532061182 0.0 0.0 0.0 0.0 8 0.09370648341843242 0.0 0.0 0.0 0.0 9 0.10216868909234134 0.0 0.0 0.0 0.0 10 0.11199978097820609 0.0 0.0 0.0 0.0 11 0.120461986652115 0.0 0.0 0.0 0.0 12 0.12911085862765423 0.0 0.0 0.0 0.0 13 0.13968861572004038 0.0 0.0 0.0 0.0 14 0.14939526340481823 0.0 0.0 0.0 0.0 15 0.15823080168198783 0.0 0.0 0.0 0.0 16 0.16669300735589673 0.0 0.0 0.0 0.0 17 0.17751965285045665 0.0 0.0 0.0 0.0 18 0.19338628848903586 0.0 0.0 0.0 0.0 19 0.2048973770895737 0.0 0.0 0.0 0.0 20 0.21578624468467705 0.0 0.0 0.0 0.0 21 0.22642622387760664 0.0 0.0 0.0 0.0 22 0.2362573157634714 0.0 0.0 0.0 0.0 23 0.2469595170569444 0.0 0.0 0.0 0.0 24 0.26002615817106844 0.0 0.0 0.0 0.0 25 0.26979502795638977 0.0 0.0 0.0 0.0 26 0.28622166249986 0.0 0.0 0.0 0.0 27 0.29860386050800614 0.0 0.0 0.0 0.0 28 0.3108616143150653 0.0 0.0 0.0 0.0 29 0.3254838079427756 0.0 0.0 0.0 0.0 30 0.339297114263421 0.0 0.0 0.0 0.0 31 0.35031042605961127 0.0 0.0 0.0 0.0 32 0.3636259555759091 0.0 0.0 0.0 0.0 33 0.3747014894726428 0.0 0.0 0.0 0.0 34 0.38422147085579034 0.0 0.0 0.0 0.0 35 0.39280812073078614 0.0 0.0 0.0 0.0 36 0.4017681032090426 0.0 0.0 0.0 0.0 37 0.4091103110731695 0.0 0.0 0.0 0.0 38 0.41377696861392804 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATC 45 0.0 400.75748 44 CTAACAG 25 8.367351E-11 400.75748 44 GGTATTC 15 2.1269134E-6 400.75748 44 CAAGCGT 15 2.1269134E-6 400.75748 44 ACCCAAT 25 8.367351E-11 400.75748 44 ATATTCA 30 0.0 400.75748 44 GAACGAA 10 3.378159E-4 400.75745 44 TCGTAAA 20 1.3371391E-8 400.75745 44 CAAAACG 60 0.0 367.36102 44 ACGATAC 35 1.8189894E-12 343.5064 44 ATCGAGT 30 2.5102054E-10 333.96457 44 CTAACTA 25 4.0719897E-8 320.606 44 TAAGCCA 785 0.0 311.41663 44 TTGCGAC 20 6.708715E-6 300.56808 44 AGGGTTA 50 0.0 280.53024 44 GGCTATG 75 0.0 267.17166 44 AACAGCA 45 9.094947E-12 267.17163 44 TTATAGG 130 0.0 246.61998 44 AGTATCG 25 1.6346085E-5 240.45448 44 ACTTCTA 160 0.0 225.42607 44 >>END_MODULE