##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840930.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1313429 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.45520009075481 39.0 37.0 39.0 35.0 39.0 2 37.84870289905278 39.0 38.0 39.0 35.0 39.0 3 38.05203783379231 39.0 38.0 39.0 35.0 40.0 4 38.68483260229522 39.0 38.0 41.0 35.0 41.0 5 39.28512085540977 40.0 39.0 41.0 35.0 41.0 6 39.37280583876251 41.0 39.0 41.0 35.0 41.0 7 39.31149304606492 40.0 39.0 41.0 35.0 41.0 8 39.25635264639352 40.0 39.0 41.0 35.0 41.0 9 39.187041705337705 40.0 39.0 41.0 35.0 41.0 10 39.0848207249878 40.0 38.0 41.0 35.0 41.0 11 38.96228726486167 40.0 38.0 41.0 35.0 41.0 12 38.92854124585341 40.0 38.0 41.0 35.0 41.0 13 38.826083480721074 40.0 38.0 41.0 35.0 41.0 14 38.843185280666106 40.0 38.0 41.0 35.0 41.0 15 38.85620844369966 40.0 38.0 41.0 35.0 41.0 16 38.819043891980456 40.0 38.0 41.0 35.0 41.0 17 38.8164895095205 40.0 38.0 41.0 35.0 41.0 18 38.89404680420487 40.0 38.0 41.0 35.0 41.0 19 38.92143465691712 40.0 38.0 41.0 35.0 41.0 20 38.82390749709349 40.0 38.0 41.0 35.0 41.0 21 38.817990922996216 40.0 38.0 41.0 35.0 41.0 22 38.81559795009856 40.0 38.0 41.0 35.0 41.0 23 38.650234614889726 40.0 38.0 41.0 35.0 41.0 24 38.44385573944233 40.0 37.0 41.0 34.0 41.0 25 38.3985062481035 40.0 37.0 41.0 34.0 41.0 26 38.38828601010743 40.0 37.0 41.0 34.0 41.0 27 38.32523281932016 40.0 37.0 41.0 34.0 41.0 28 38.23703711173391 40.0 36.0 41.0 34.0 41.0 29 38.13924869709846 40.0 36.0 41.0 34.0 41.0 30 37.98255075025517 40.0 35.0 41.0 34.0 41.0 31 37.84944138557759 40.0 35.0 41.0 33.0 41.0 32 37.78025554950729 39.0 35.0 41.0 33.0 41.0 33 37.68191257927142 39.0 35.0 41.0 33.0 41.0 34 37.56995661474906 39.0 35.0 41.0 33.0 41.0 35 37.4045701209809 39.0 35.0 41.0 33.0 41.0 36 37.34399483144303 39.0 35.0 41.0 33.0 41.0 37 37.26789835145854 38.0 35.0 41.0 33.0 41.0 38 37.23182669136652 38.0 35.0 41.0 33.0 41.0 39 37.09205240821161 38.0 35.0 41.0 33.0 41.0 40 37.009214870837965 38.0 35.0 41.0 33.0 41.0 41 36.899441699608865 37.0 35.0 40.0 33.0 41.0 42 36.84079961181284 37.0 35.0 40.0 33.0 41.0 43 36.70953220838708 37.0 35.0 40.0 33.0 41.0 44 36.566654205542925 37.0 35.0 40.0 32.0 41.0 45 36.37824254644467 36.0 35.0 40.0 32.0 41.0 46 36.101332128273576 36.0 35.0 40.0 31.0 41.0 47 36.0151453279756 36.0 35.0 40.0 31.0 41.0 48 36.10379714929097 36.0 35.0 40.0 31.0 41.0 49 36.067241814426055 36.0 34.0 40.0 31.0 41.0 50 36.60656959849073 38.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 0.0 20 1.0 21 12.0 22 22.0 23 55.0 24 108.0 25 193.0 26 430.0 27 951.0 28 2009.0 29 3889.0 30 7557.0 31 13856.0 32 24017.0 33 42325.0 34 86706.0 35 69435.0 36 107935.0 37 164573.0 38 204625.0 39 267006.0 40 317722.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 43.58499774255022 19.483656901134356 36.93134535631542 2 28.301644017301275 18.017342391556756 31.914096612759423 21.76691697838254 3 24.0003075918074 17.564786524433373 30.127399349336738 28.307506534422494 4 21.83977969117478 17.941358078738933 34.94197250098787 25.27688972909841 5 19.8170590111837 21.725574812190075 29.3407561428901 29.116610033736123 6 22.54099764814086 24.087331709593744 27.863706374687936 25.507964267577464 7 27.654939855903898 19.364579280646307 21.730143007349465 31.25033785610033 8 26.53969114432527 21.336440721196198 24.459258932153926 27.664609202324602 9 24.409465604916598 20.84338019032624 25.421244696135076 29.32590950862209 10 27.597152187137635 17.233059419275804 26.197076507371165 28.972711886215397 11 26.640952803691707 19.92562978280516 25.179663308789436 28.253754104713693 12 29.080597428562942 21.144652661087886 23.46377307033726 26.310976840011907 13 28.186753909042668 17.23031850218017 26.696456374878274 27.886471213898883 14 24.699469860951755 20.56921234417696 22.453592847424567 32.27772494744672 15 26.720896218981004 21.19322780294938 24.648610621510564 27.437265356559053 16 26.578749212938042 23.21023823899122 22.068341722316166 28.142670825754575 17 25.349143349202734 24.81976566681564 21.472801346703932 28.35828963727769 18 27.863477964929967 23.284547546917267 19.011838477755553 29.84013601039721 19 30.30616805324079 19.81485105019 19.64026985851538 30.23871103805383 20 26.335797367044584 20.993673811070106 25.3979469008222 27.27258192106311 21 27.626160226399755 27.491474605783793 19.57486853115014 25.307496636666315 22 32.14631320002832 21.113436660832065 18.978642926264 27.76160721287561 23 31.333935827517134 22.900133924254757 21.265329149881723 24.50060109834639 24 29.696009453118517 22.78600518185604 22.691367405470718 24.826617959554724 25 29.176589764573546 23.5867056540969 21.10884297444668 26.127861606882874 26 28.480152727580645 21.77645886016266 23.173254198276428 26.570134213980268 27 28.586374983302488 24.421764137678625 21.06118200637324 25.93067887264565 28 27.827400921995004 21.606455671556926 22.05069808968779 28.515445316760278 29 30.275748706053108 24.649503328404382 20.583080072478158 24.49166789306435 30 30.54580721355582 24.493005830755575 21.47016381646612 23.491023139222488 31 28.254286693562335 22.62899386514642 23.048544269367554 26.06817517192369 32 24.315678617223245 25.36281061795325 24.90466074076649 25.416850024057013 33 25.768188231996508 21.607055833197965 25.07174640790182 27.55300952690371 34 30.437352482538177 20.75684316836473 23.76457754843298 25.041226800664113 35 26.181024167979338 22.913371551963774 23.239613086725136 27.665991193331752 36 25.39377457675558 22.738088394954183 26.369113014416744 25.499024013873495 37 24.67943220788806 27.95985170361206 22.551634275941502 24.80908181255837 38 25.918992219873356 21.47391765862396 20.75253379137559 31.854556330127092 39 24.96405777075931 24.92408540597447 23.25996841689696 26.851888406369255 40 25.697256630141336 22.92832896617437 25.258555661426072 26.11585874225822 41 25.253145392499437 22.57700716623138 23.083423074581024 29.086424366688163 42 24.716121352140487 21.680890681325547 23.859994056303925 29.74299391023004 43 24.7898050012016 22.56451060931711 23.337525486223214 29.308158903258075 44 26.741370096238438 23.3444044518156 20.64839860170651 29.265826850239453 45 26.866115771881 20.32255915060093 26.844026430535866 25.9672986469822 46 24.373999679693483 25.221791859930164 25.2680016851795 25.13620677519685 47 25.45384033615476 19.829071394225544 25.20157928946472 29.51550898015498 48 23.634737530995046 21.888082262710437 21.657432053849764 32.81974815244475 49 24.773570620729622 24.810257320982924 22.711871535794067 27.704300522493387 50 18.173150557102357 24.33398755458183 31.826088720515667 25.666773167800145 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 15357.0 1 11646.0 2 8754.5 3 8227.0 4 5799.5 5 3323.5 6 1544.5 7 1692.5 8 2489.0 9 2659.0 10 2493.0 11 2493.5 12 2527.0 13 2452.5 14 2245.5 15 2267.5 16 2747.0 17 2760.0 18 2383.5 19 2313.5 20 2356.0 21 2319.5 22 2148.5 23 2594.5 24 3796.0 25 4874.0 26 6129.0 27 7771.0 28 8679.5 29 9020.0 30 10261.5 31 14144.0 32 20155.0 33 23749.5 34 25836.0 35 27510.5 36 27894.0 37 29020.5 38 29022.5 39 30314.5 40 34283.0 41 40841.5 42 49187.0 43 49665.0 44 44330.5 45 42542.5 46 46977.5 47 57811.0 48 69836.5 49 84650.0 50 97741.0 51 98192.5 52 96562.0 53 89707.5 54 79481.0 55 78225.0 56 81703.5 57 85617.5 58 87339.5 59 87671.5 60 90115.5 61 94831.0 62 93071.5 63 87072.0 64 80072.5 65 71800.5 66 64513.0 67 60066.5 68 55699.0 69 50836.0 70 49036.0 71 45881.5 72 39999.5 73 35705.0 74 32181.5 75 27569.5 76 23675.0 77 20922.5 78 18638.0 79 14549.5 80 10169.0 81 6985.5 82 5391.0 83 4601.0 84 3714.0 85 3378.5 86 3177.5 87 2723.5 88 1473.0 89 427.0 90 185.0 91 92.5 92 46.0 93 39.0 94 31.0 95 18.0 96 13.0 97 13.0 98 6.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 8393.0 25 5991.0 26 3942.0 27 5942.0 28 4912.0 29 5684.0 30 6489.0 31 6333.0 32 9931.0 33 7231.0 34 7476.0 35 5944.0 36 4922.0 37 6480.0 38 7919.0 39 6816.0 40 10207.0 41 7639.0 42 13581.0 43 19328.0 44 62718.0 45 115240.0 46 152597.0 47 169141.0 48 230625.0 49 230767.0 50 197181.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.74201440295919 #Duplication Level Percentage of deduplicated Percentage of total 1 67.54452245758085 6.580197106227531 2 11.991145692628761 2.3363582809114285 3 5.080430475253879 1.4848088058946827 4 2.680888838400515 1.044690307057214 5 1.5825731708527753 0.7708725312092266 6 1.0644562305268173 0.622196875746714 7 0.7620552855685375 0.519676749750191 8 0.5957515457171452 0.46430561111693025 9 0.4836331528255332 0.4240405026517417 >10 3.6949784093975895 8.020717390209718 >50 1.6413403690899164 11.814015835716168 >100 2.7379187723166565 52.549702751286645 >500 0.10895239317263535 6.961589405510435 >1k 0.029001716168255448 4.191828736445154 >5k 0.0015676603334192137 1.0778333657878376 >10k+ 7.838301667096068E-4 1.13716574447839 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 14892 1.1338260385601353 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 8972 0.683097449500506 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 5143 0.391570461745553 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 3167 0.24112456782970376 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2846 0.21668472372697722 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 2541 0.19346306500008756 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 2055 0.15646068420904366 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 1978 0.1505981670878289 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 1922 0.14633451827239996 No Hit CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG 1883 0.14336519141879767 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1811 0.1378833572275319 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 1800 0.13704585478164408 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 1609 0.12250376685759183 No Hit ACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCA 1586 0.12075262537982638 No Hit CTTTTCCAAGCGGCTGCCGAAGATGGCGGAGG 1544 0.1175548887682547 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 1527 0.11626056680642807 No Hit CCTTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGCTCTGGGTCC 1515 0.11534692777455044 No Hit ATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCAC 1463 0.11138782530308072 No Hit CTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGCTCTGGGTCCTCT 1451 0.11047418627120309 No Hit CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 1409 0.10727644965963139 No Hit CTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTG 1357 0.10331734718816167 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 1342 0.10217529839831464 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.01416140499410322 0.0 0.0 0.0 0.0 2 0.028246673402216642 0.0 0.0 0.0 0.0 3 0.036469424689115286 0.0 0.0 0.0 0.0 4 0.046291044281799774 0.0 0.0 0.0 0.0 5 0.05504675167062704 0.0 0.0 0.0 0.0 6 0.07035020545457729 0.0 0.0 0.0 0.0 7 0.08298887872888447 0.0 0.0 0.0 0.0 8 0.09326731783750777 0.0 0.0 0.0 0.0 9 0.10385030329009029 0.0 0.0 0.0 0.0 10 0.11222532774896854 0.0 0.0 0.0 0.0 11 0.12326513271748987 0.0 0.0 0.0 0.0 12 0.13224924986428654 0.0 0.0 0.0 0.0 13 0.1406242743231648 0.0 0.0 0.0 0.0 14 0.14839020609412462 0.0 0.0 0.0 0.0 15 0.1582118256868091 0.0 0.0 0.0 0.0 16 0.16963231358527944 0.0 0.0 0.0 0.0 17 0.18630622591704615 0.0 0.0 0.0 0.0 18 0.2217097384023042 0.0 0.0 0.0 0.0 19 0.23495750436452978 0.0 0.0 0.0 0.0 20 0.24622571909102053 0.0 0.0 0.0 0.0 21 0.2616053094609606 0.0 0.0 0.0 0.0 22 0.2711985192956757 0.0 0.0 0.0 0.0 23 0.2852837877037891 0.0 0.0 0.0 0.0 24 0.29761791463413706 0.0 0.0 0.0 0.0 25 0.31360659769199556 0.0 0.0 0.0 0.0 26 0.32731118317015995 0.0 0.0 0.0 0.0 27 0.3423862271961408 0.0 0.0 0.0 0.0 28 0.3554817199863868 0.0 0.0 0.0 0.0 29 0.3724601786621127 0.0 0.0 0.0 0.0 30 0.3889818178218998 0.0 0.0 0.0 0.0 31 0.4030670862300132 0.0 0.0 0.0 0.0 32 0.41570575950432037 0.0 0.0 0.0 0.0 33 0.42803988643466834 0.0 0.0 0.0 0.0 34 0.43938423774714885 0.0 0.0 0.0 0.0 35 0.4501956329577008 0.0 0.0 0.0 0.0 36 0.46268203306002836 0.0 0.0 0.0 0.0 37 0.46938205262713095 0.0 0.0 0.0 0.0 38 0.47509229657636615 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAT 20 9.933501E-8 268.15625 44 CGACCAT 20 9.933501E-8 268.15625 44 GGATAGT 20 9.933501E-8 268.15625 44 AACATAC 15 1.0582702E-5 268.15625 44 GAACGTA 30 9.094947E-12 268.15625 44 TCAGTAT 20 9.933501E-8 268.15625 44 ACGACAC 105 0.0 255.38687 44 TTATAAC 65 0.0 247.52882 44 CTATCAT 1785 0.0 240.36415 44 TGTTCGA 30 2.7903297E-9 223.46353 44 GGTATGA 30 2.7903297E-9 223.46353 44 TGGTCCA 60 0.0 223.46353 44 TATAATC 55 0.0 219.40056 44 GACGTGG 25 3.022069E-7 214.525 44 CATCGTA 20 3.334708E-5 201.11717 44 GTAATAT 90 0.0 193.6684 44 TATGTGT 70 0.0 191.54016 44 TAGGTAT 15 0.0037887585 178.77083 44 ATGCTTG 45 1.5097612E-10 178.77083 44 GGTGCGT 120 0.0 178.77083 44 >>END_MODULE