##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840928.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6098603 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.28214002452693 39.0 35.0 39.0 31.0 39.0 2 36.98471240052845 39.0 35.0 39.0 33.0 39.0 3 37.13938864359592 39.0 35.0 39.0 33.0 39.0 4 37.40605233690404 39.0 35.0 39.0 34.0 41.0 5 38.29685601768143 40.0 35.0 41.0 34.0 41.0 6 38.337691599207226 40.0 36.0 41.0 34.0 41.0 7 38.2981627103781 40.0 36.0 41.0 34.0 41.0 8 38.22711020868222 40.0 35.0 41.0 34.0 41.0 9 38.10018146778861 40.0 35.0 41.0 34.0 41.0 10 38.03256762245386 40.0 35.0 41.0 34.0 41.0 11 37.837891890978966 40.0 35.0 41.0 33.0 41.0 12 37.828540569045074 39.0 35.0 41.0 33.0 41.0 13 37.66146246935568 39.0 35.0 41.0 33.0 41.0 14 37.64900027104568 39.0 35.0 41.0 33.0 41.0 15 37.61762292118375 39.0 35.0 41.0 33.0 41.0 16 37.54849364682371 39.0 35.0 41.0 33.0 41.0 17 37.531397436429295 39.0 35.0 41.0 33.0 41.0 18 37.54352677162294 39.0 35.0 41.0 33.0 41.0 19 37.52388407640242 39.0 35.0 41.0 33.0 41.0 20 37.49427631213247 39.0 35.0 41.0 33.0 41.0 21 37.463625686079254 39.0 35.0 41.0 33.0 41.0 22 37.33294477440161 38.0 35.0 41.0 33.0 41.0 23 37.21014025671125 38.0 35.0 41.0 33.0 41.0 24 37.001615615904164 38.0 35.0 41.0 33.0 41.0 25 36.948664827325764 37.0 35.0 41.0 33.0 41.0 26 36.858493289493694 37.0 35.0 40.0 33.0 41.0 27 36.78376715106928 37.0 35.0 40.0 33.0 41.0 28 36.69368400466031 37.0 35.0 40.0 33.0 41.0 29 36.59130298878762 36.0 35.0 40.0 33.0 41.0 30 36.48314251295756 36.0 35.0 40.0 33.0 41.0 31 36.36620395999034 36.0 35.0 40.0 33.0 41.0 32 36.28212679133403 35.0 35.0 40.0 33.0 41.0 33 36.19759888014595 35.0 35.0 40.0 33.0 41.0 34 36.09896022629465 35.0 35.0 40.0 33.0 41.0 35 35.964568530247824 35.0 35.0 39.0 33.0 41.0 36 35.92161892086488 35.0 35.0 39.0 33.0 41.0 37 35.84731924190381 35.0 35.0 39.0 33.0 41.0 38 35.743193096437906 35.0 35.0 39.0 33.0 41.0 39 35.68732444557168 35.0 35.0 39.0 33.0 41.0 40 35.61486561475285 35.0 35.0 38.0 33.0 41.0 41 35.50421772067211 35.0 35.0 37.0 33.0 41.0 42 35.42700035164339 35.0 35.0 37.0 33.0 40.0 43 35.29966867068837 35.0 35.0 37.0 32.0 40.0 44 35.135342877858825 35.0 34.0 37.0 32.0 40.0 45 34.970833804605704 35.0 34.0 37.0 31.0 39.0 46 34.71538382365337 35.0 34.0 36.0 31.0 39.0 47 34.593308250882444 35.0 34.0 36.0 31.0 39.0 48 34.34815992544002 35.0 34.0 36.0 30.0 39.0 49 34.62770314738466 35.0 34.0 36.0 31.0 39.0 50 34.30175563369725 35.0 33.0 36.0 30.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 29.0 21 88.0 22 279.0 23 673.0 24 1571.0 25 3512.0 26 6770.0 27 13248.0 28 25389.0 29 45580.0 30 79185.0 31 134402.0 32 216567.0 33 389190.0 34 854272.0 35 499449.0 36 736276.0 37 850414.0 38 857106.0 39 869378.0 40 515219.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.00374823545654 16.838512033001656 36.1577397315418 2 27.830094859429284 21.2247788550919 30.481866092939647 20.463260192539177 3 27.889255949272318 18.386423907245643 25.40239133454006 28.321928808941983 4 22.19465671072539 22.016796305645737 28.692866218706154 27.09568076492272 5 22.869270224672768 24.512220257655727 27.28975799867609 25.328751518995418 6 22.14333348145469 29.710705878051087 22.63793855740405 25.508022083090175 7 29.03983092521353 23.68963843030937 22.007039972924947 25.26349067155216 8 26.465684026325377 25.62627867398485 22.026536241168674 25.881501058521106 9 24.65207195811893 27.06000046240098 24.70631388860695 23.58161369087314 10 28.07946344433307 22.98890418018684 22.135856359235056 26.795776016245032 11 26.360545193710756 23.956125689768623 24.245946161768522 25.437382954752096 12 26.140822742519887 23.70080492204526 23.613178296734514 26.545194038700338 13 24.83588454601816 23.023682636826827 25.519696887959427 26.62073592919559 14 21.247636548894885 24.545063844949407 24.105192615423565 30.102106990732143 15 23.02668332403339 27.233564801643915 24.67402780604017 25.065724068282524 16 23.61549030163137 29.85004926538094 20.067202275668706 26.46725815731898 17 24.649432009265073 31.041666427540864 19.971295065443677 24.337606497750386 18 25.285380930681995 25.823192622966275 20.526028665909227 28.365397780442503 19 26.118637333828747 25.065592890699723 22.03975238263583 26.776017392835705 20 26.94931937691304 22.87586189820849 23.556017665029188 26.61880105984928 21 26.02848554004909 26.81033672793589 20.075564846572238 27.085612885442785 22 26.024419034982273 25.178700761469468 22.458389240945838 26.338490962602418 23 28.682699956039116 24.04412945062992 22.304829483079978 24.96834111025099 24 26.36684171768518 26.02620632954793 23.991182898772063 23.615769053994825 25 26.09545096532387 26.022002768914476 22.15859462735521 25.72395163840644 26 26.42323936573905 27.134525343127997 22.88034009604417 23.561895195088784 27 25.272122639844362 27.62395291976953 21.270073269807526 25.833851170578587 28 24.74409228357039 24.761008486518023 22.292295939944136 28.202603289967453 29 26.140472128358105 28.19061669187834 21.759197783678314 23.909713396085245 30 26.67692473814923 27.281020543137892 22.01997961883166 24.02207509988122 31 25.11100414912988 27.58855909321567 22.299317388083395 25.001119369571057 32 24.438481578018795 26.005184349489042 23.24874639890416 26.307587673588007 33 23.755996274479635 25.44784889663055 22.695692847880082 28.10046198100974 34 23.151553220352913 28.96857784213762 23.903227026208526 23.976641911300938 35 23.638950354787422 26.04225540106238 22.585102751748913 27.733691492401285 36 23.402386926450376 27.16329282394781 25.527737656273864 23.90658259332795 37 22.545603632444923 29.75056388855585 22.39121350499945 25.31261897399978 38 25.667097062281407 25.73664824235364 22.330383600289544 26.265871095075404 39 24.104996757905226 28.160989266638342 22.050725455234915 25.683288520221513 40 24.399340085092042 28.79264466724658 22.45242721456017 24.355588033101206 41 25.180969684526982 27.821666256296428 20.457847559062806 26.53951650011378 42 24.288193464642475 28.04037676490975 21.596023246088148 26.07540652435962 43 24.583296145050397 25.167895952793074 22.658820792468898 27.58998710968763 44 25.07567999197569 25.840785740746647 21.911783706144803 27.171750561132857 45 25.540107339136814 26.03975663462274 25.39490029109545 23.025235735144992 46 24.954880278668547 28.985836579567213 22.669626221070327 23.38965692069391 47 26.827189240446476 27.103488113525355 22.66103163507079 23.408291010957385 48 23.378403792750877 27.323274163848648 21.062598719958483 28.235723323441995 49 24.97568086593804 28.586967550595432 21.817032609515227 24.6203189739513 50 23.8079713043262 29.63913281092974 25.105622370364294 21.447273514379766 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 103907.0 1 82236.0 2 61458.5 3 56211.0 4 43202.0 5 33773.5 6 29262.0 7 26835.5 8 26944.5 9 28129.0 10 28817.0 11 28207.0 12 26323.5 13 23241.5 14 20314.5 15 19235.5 16 19663.0 17 22695.0 18 27749.0 19 29628.5 20 28638.5 21 30211.5 22 34146.0 23 41642.5 24 49406.0 25 55786.5 26 64065.0 27 71291.0 28 75573.5 29 82963.5 30 93956.0 31 107691.5 32 127149.0 33 138385.0 34 143537.0 35 153041.5 36 161205.5 37 165649.5 38 170848.0 39 186786.0 40 208113.5 41 239923.5 42 265448.5 43 263691.0 44 254966.0 45 248089.5 46 248720.5 47 250704.0 48 265184.5 49 314756.5 50 366235.0 51 389455.5 52 382384.5 53 345728.0 54 331870.5 55 333301.5 56 331176.5 57 337871.5 58 343238.0 59 349488.5 60 348679.0 61 332634.5 62 315715.0 63 310994.0 64 306380.5 65 297155.0 66 278330.5 67 264042.5 68 267100.0 69 269606.5 70 241729.5 71 209590.5 72 194661.5 73 167638.5 74 134683.5 75 117306.5 76 99808.5 77 72658.0 78 58578.0 79 54291.5 80 43248.0 81 28691.0 82 19432.0 83 15680.5 84 12661.5 85 10617.0 86 8692.5 87 5823.0 88 3458.5 89 2198.0 90 1333.5 91 825.0 92 611.5 93 530.5 94 468.0 95 282.5 96 101.0 97 13.0 98 115.0 99 216.0 100 215.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 39911.0 25 27925.0 26 25019.0 27 23318.0 28 25533.0 29 29857.0 30 30864.0 31 35460.0 32 37100.0 33 31875.0 34 37873.0 35 24743.0 36 24097.0 37 25757.0 38 33230.0 39 32590.0 40 41247.0 41 43876.0 42 60656.0 43 103969.0 44 226900.0 45 414921.0 46 809452.0 47 551914.0 48 1212002.0 49 660903.0 50 1487611.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.110105096671443 #Duplication Level Percentage of deduplicated Percentage of total 1 79.22098374000393 16.723632926131828 2 9.731407158236426 4.108620556977435 3 3.1094556393653874 1.9692280602132306 4 1.3653267074680704 1.152887611437734 5 0.8046654907306063 0.8493286538493902 6 0.5428393943340039 0.6875637999002576 7 0.3750220374656016 0.5541728237126693 8 0.3018331194570138 0.5097383098714998 9 0.22551425370043948 0.4284566636772334 >10 2.385901452710133 12.21591548873467 >50 1.141150652343236 17.47977965429208 >100 0.744271777143947 25.96436366385189 >500 0.03136315427732952 4.510391013052788 >1k 0.017129107336079964 7.343632837392117 >5k 0.0026538053619278817 3.8211662712939813 >10k+ 4.825100658050694E-4 1.681121665611204 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 17081 0.2800805364769604 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15928 0.26117456735583544 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9089 0.14903413125924084 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8913 0.1461482244376294 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT 7982 0.1308824332392189 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7966 0.13062007807361783 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 7367 0.12079815656142891 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6737 0.11046792191588796 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.014790272460758636 0.0 0.0 0.0 0.0 2 0.03313873685498138 0.0 0.0 0.0 0.0 3 0.04453478936077656 0.0 0.0 0.0 0.0 4 0.055307748348269264 0.0 0.0 0.0 0.0 5 0.0671465251960162 0.0 0.0 0.0 0.0 6 0.08585572794294037 0.0 0.0 0.0 0.0 7 0.09766171039498718 0.0 0.0 0.0 0.0 8 0.10956607603413437 0.0 0.0 0.0 0.0 9 0.11983072188827507 0.0 0.0 0.0 0.0 10 0.1297018349940142 0.0 0.0 0.0 0.0 11 0.13929419573630222 0.0 0.0 0.0 0.0 12 0.1491981032377415 0.0 0.0 0.0 0.0 13 0.15760986573482486 0.0 0.0 0.0 0.0 14 0.16698906290506202 0.0 0.0 0.0 0.0 15 0.17838511541085722 0.0 0.0 0.0 0.0 16 0.18851858368219737 0.0 0.0 0.0 0.0 17 0.20281694020745406 0.0 0.0 0.0 0.0 18 0.2304462185848136 0.0 0.0 0.0 0.0 19 0.2425801449938617 0.0 0.0 0.0 0.0 20 0.2530251600243531 0.0 0.0 0.0 0.0 21 0.26379811901184586 0.0 0.0 0.0 0.0 22 0.2741447508552369 0.0 0.0 0.0 0.0 23 0.2856063921524323 0.0 0.0 0.0 0.0 24 0.2973139914173787 0.0 0.0 0.0 0.0 25 0.30774260925002006 0.0 0.0 0.0 0.0 26 0.32189339099462616 0.0 0.0 0.0 0.0 27 0.3329287051477199 0.0 0.0 0.0 0.0 28 0.3438984305094134 0.0 0.0 0.0 1.6397197850065008E-5 29 0.3572129551636662 0.0 0.0 0.0 1.6397197850065008E-5 30 0.3698060031125161 0.0 0.0 0.0 1.6397197850065008E-5 31 0.38275978941406746 0.0 0.0 0.0 1.6397197850065008E-5 32 0.39497570181236585 0.0 0.0 0.0 1.6397197850065008E-5 33 0.4054699084364075 0.0 0.0 0.0 1.6397197850065008E-5 34 0.41765302643900576 0.0 0.0 0.0 1.6397197850065008E-5 35 0.4262287609145898 0.0 0.0 0.0 1.6397197850065008E-5 36 0.4365753927579808 0.0 0.0 0.0 1.6397197850065008E-5 37 0.44301949151305636 0.0 0.0 0.0 1.6397197850065008E-5 38 0.4478730620766756 0.0 0.0 0.0 1.6397197850065008E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCAT 6950 0.0 126.04609 44 CACCGAT 35 1.2870441E-7 117.728836 44 ATGTCGG 40 3.531306E-5 82.410194 44 TAAGCCA 3320 0.0 80.92085 44 ATTAGTC 565 0.0 80.22231 44 AGTACGG 85 5.4569682E-11 77.56253 44 CGGATTA 205 0.0 76.38017 44 TCGTACC 25 2.1785072E-6 73.20499 42 GGTACGA 80 2.9376679E-9 72.10892 44 CTATGCG 120 0.0 68.675156 44 TCGAATA 80 2.424331E-7 61.807644 44 CAACGAA 85 0.0 60.286465 42 TTAAGCC 3200 0.0 59.68372 43 CCTTAGC 4410 0.0 59.044426 43 CAATGCG 170 0.0 58.171898 44 AATCGCA 710 0.0 58.035343 44 ACCTTAG 2970 0.0 57.55342 42 TACGCTA 840 0.0 57.518208 42 ACGAGTG 60 4.066169E-7 57.353725 43 ACTTCTA 2505 0.0 56.256054 44 >>END_MODULE