##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840925.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2736385 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.190135525519985 39.0 37.0 39.0 34.0 39.0 2 37.72327797440784 39.0 37.0 39.0 35.0 39.0 3 38.04820959039024 39.0 38.0 39.0 35.0 41.0 4 38.75850693524486 40.0 38.0 41.0 35.0 41.0 5 39.11407093665548 40.0 38.0 41.0 35.0 41.0 6 39.110695315169465 40.0 38.0 41.0 35.0 41.0 7 39.036125764466625 40.0 38.0 41.0 35.0 41.0 8 38.960301638841024 40.0 38.0 41.0 35.0 41.0 9 38.86694854707945 40.0 38.0 41.0 35.0 41.0 10 38.74726911600524 40.0 38.0 41.0 35.0 41.0 11 38.68173849805491 40.0 38.0 41.0 35.0 41.0 12 38.66225732124683 40.0 38.0 41.0 35.0 41.0 13 38.563551181577154 40.0 38.0 41.0 35.0 41.0 14 38.547816919037345 40.0 38.0 41.0 35.0 41.0 15 38.559479020678744 40.0 38.0 41.0 35.0 41.0 16 38.5324539492798 40.0 38.0 41.0 35.0 41.0 17 38.53321992336605 40.0 38.0 41.0 35.0 41.0 18 38.57025418572314 40.0 38.0 41.0 35.0 41.0 19 38.66063474255267 40.0 38.0 41.0 35.0 41.0 20 38.634974245217684 40.0 38.0 41.0 35.0 41.0 21 38.53447413284315 40.0 37.0 41.0 35.0 41.0 22 38.438853450811926 40.0 37.0 41.0 34.0 41.0 23 38.28635298030065 40.0 37.0 41.0 34.0 41.0 24 38.10973565488774 40.0 36.0 41.0 34.0 41.0 25 38.026045938088814 40.0 36.0 41.0 33.0 41.0 26 37.91285731053121 40.0 35.0 41.0 33.0 41.0 27 37.780941764876836 39.0 35.0 41.0 33.0 41.0 28 37.68935274121124 39.0 35.0 41.0 33.0 41.0 29 37.49706062640693 39.0 35.0 41.0 33.0 41.0 30 37.350248660897144 39.0 35.0 41.0 33.0 41.0 31 37.20222054936332 39.0 35.0 41.0 33.0 41.0 32 37.05854569609057 38.0 35.0 41.0 33.0 41.0 33 36.96510272650035 38.0 35.0 41.0 33.0 41.0 34 36.895307464581975 38.0 35.0 40.0 33.0 41.0 35 36.74425564845089 37.0 35.0 40.0 32.0 41.0 36 36.616313045945084 37.0 35.0 40.0 32.0 41.0 37 36.542920115694756 37.0 35.0 40.0 32.0 41.0 38 36.523014361759635 37.0 35.0 40.0 33.0 41.0 39 36.41129445320425 36.0 35.0 40.0 32.0 41.0 40 36.27905898840081 36.0 35.0 40.0 32.0 41.0 41 36.160623582794116 36.0 35.0 40.0 32.0 41.0 42 36.04308577918364 35.0 35.0 40.0 32.0 41.0 43 35.87326398398558 35.0 35.0 39.0 32.0 41.0 44 35.731733348913195 35.0 34.0 39.0 31.0 41.0 45 35.5480992431915 35.0 34.0 39.0 31.0 41.0 46 35.23975569105076 35.0 34.0 39.0 30.0 41.0 47 35.12264601541049 35.0 34.0 39.0 30.0 41.0 48 35.170183950568436 35.0 34.0 39.0 30.0 41.0 49 34.97926634359254 35.0 33.0 38.0 30.0 40.0 50 36.120834809524695 37.0 34.0 39.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 23.0 22 56.0 23 121.0 24 303.0 25 632.0 26 1268.0 27 2909.0 28 5967.0 29 11763.0 30 21754.0 31 38423.0 32 64227.0 33 108683.0 34 203355.0 35 176553.0 36 279058.0 37 415027.0 38 456062.0 39 513212.0 40 436983.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 39.06047577369412 17.44005320888691 43.49947101741897 2 26.563550085240202 16.79862300078388 30.222501585120515 26.415325328855406 3 23.56850370105084 16.073286471019248 30.30607900569547 30.052130822234446 4 21.6534953962984 16.678976094372686 34.49499978986875 27.172528719460164 5 22.535315754179326 19.219042642025887 32.521337457996594 25.7243041457982 6 27.02872585546259 18.648289622987992 28.556946482311517 25.7660380392379 7 29.73543562035313 18.473021888367317 22.03279143833927 29.758751052940287 8 28.915412122197715 17.40745545674311 24.599645152272068 29.077487268787106 9 27.665441814656926 17.368937485039567 25.626437800236445 29.33918290006706 10 27.60627616362464 15.884862692932463 26.42928535275555 30.079575790687347 11 30.089406278721743 16.766207971466006 25.117773997445536 28.026611752366716 12 31.190018948357046 17.504079287088622 23.581696289082128 27.724205475472203 13 28.91866458849906 17.09028517551441 26.4872084885716 27.50384174741493 14 28.141982944651428 19.360835554938358 22.06162510026915 30.43555640014106 15 26.130058453032014 21.600213420260673 23.055564184133445 29.21416394257387 16 28.135002932701358 19.679431074209223 21.881935473261255 30.303630519828168 17 29.421517805425772 20.479939774556577 20.306426179064715 29.792116240952936 18 27.39815486490388 18.315660990686617 20.832631373143766 33.453552771265734 19 29.799790599641497 18.189655329933473 22.86118364192173 29.149370428503303 20 30.64831885864014 18.473606601410257 23.1761977938046 27.701876746145004 21 30.24779042422758 21.508669284475687 19.756247750225207 28.487292541071525 22 32.087334201875834 19.569249210180583 21.617389365896976 26.726027222046607 23 31.638420763160152 20.87754464375444 22.196839991448574 25.28719460163683 24 33.30799576813936 19.98720940218573 20.955348023030385 25.74944680664453 25 31.170983283215314 21.057027251857015 22.685091285343493 25.086898179584182 26 33.40184945547584 19.779259730605776 21.580105546078045 25.238785267840335 27 31.071842693696954 20.02038095859455 22.54431320098932 26.36346314671918 28 31.49039715409412 20.462176545717654 21.398019967242874 26.649406332945354 29 32.061203415893075 21.1895676779061 22.42062005233546 24.32860885386536 30 31.57125928093891 22.070059538312183 21.152356375985235 25.206324804763668 31 29.636631510056322 21.7357138545744 22.878446048212503 25.74920858715677 32 29.31307775232191 19.959976795260236 25.32792756205298 25.399017890364874 33 28.109098632887928 18.600254885301617 24.665907159959836 28.624739321850623 34 30.185691480649012 19.012493429578896 23.97901200320127 26.82280308657082 35 27.663073197253564 19.874843769999693 23.46426839345261 28.99781463929414 36 27.714172015303205 20.222219595513057 24.709085393001658 27.35452299618208 37 27.239386622823442 22.97572811494343 24.79238465693192 24.99250060530121 38 30.304633352044036 20.47178095154886 22.046073006841574 27.177512689565532 39 28.31953078707656 22.003073183959184 20.2365347340089 29.440861294955354 40 28.109240233794115 20.466440588105982 22.293926913478078 29.13039226462183 41 27.373847827378118 20.900079815082854 22.912827447276076 28.813244910262952 42 27.893005110711584 21.044241583111077 23.187337407415757 27.87541589876158 43 27.337843198767715 21.142089808899225 24.60308370555907 26.916983286773995 44 28.327708917313675 21.81079523781098 21.98035328191131 27.881142562964033 45 29.590966707523584 19.943819457904176 23.25127370770649 27.213940126865747 46 27.760416041374462 22.41113368977816 23.249073088589398 26.579377180257975 47 27.72544982311474 21.186077849312817 23.699964486834762 27.388507840737685 48 26.317394687557698 22.316576982933714 21.057377805913852 30.308650523594732 49 25.331108187040662 23.398055136557655 23.71167238999968 27.559164286402005 50 23.664901452572302 27.395159335434187 29.75955173506871 19.1803874769248 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12965.0 1 11742.5 2 17614.0 3 23510.0 4 20302.0 5 13125.5 6 6187.5 7 5460.5 8 7538.0 9 8898.0 10 8754.5 11 7751.5 12 6890.5 13 6056.0 14 5325.0 15 4904.5 16 4497.0 17 4527.0 18 5504.0 19 7522.5 20 9359.0 21 9363.0 22 8388.5 23 8884.5 24 11284.0 25 14007.5 26 15426.5 27 16643.0 28 18345.0 29 18711.0 30 19014.5 31 21040.0 32 25851.0 33 30359.5 34 32603.0 35 34054.5 36 35591.5 37 39038.0 38 44023.5 39 50227.0 40 54733.5 41 59313.5 42 66357.5 43 68019.5 44 69667.0 45 74010.5 46 83260.5 47 100494.0 48 112702.0 49 115463.5 50 128557.0 51 149454.5 52 166577.0 53 177185.0 54 178993.0 55 183144.0 56 188209.5 57 196975.0 58 214810.5 59 223129.5 60 215360.0 61 205664.0 62 199556.5 63 192695.0 64 183689.0 65 179642.0 66 175179.0 67 169901.5 68 161239.0 69 147551.0 70 132628.5 71 124362.0 72 119821.5 73 106061.5 74 91391.5 75 82776.0 76 74286.0 77 58034.0 78 43359.0 79 37402.0 80 31589.5 81 22275.0 82 14507.5 83 10664.5 84 9389.0 85 9032.5 86 7565.5 87 5550.5 88 2978.0 89 1263.0 90 893.0 91 692.0 92 549.5 93 496.0 94 374.0 95 216.0 96 171.0 97 165.0 98 137.5 99 110.0 100 110.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 14809.0 25 12238.0 26 11722.0 27 13620.0 28 15060.0 29 17534.0 30 17189.0 31 19230.0 32 25583.0 33 19169.0 34 15504.0 35 16697.0 36 14493.0 37 16950.0 38 17312.0 39 14619.0 40 16474.0 41 19187.0 42 29167.0 43 47805.0 44 164109.0 45 282143.0 46 299469.0 47 403150.0 48 434177.0 49 564459.0 50 214516.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.617235991768743 #Duplication Level Percentage of deduplicated Percentage of total 1 70.6522846966534 9.620888340719604 2 11.32736707693735 3.084948613040951 3 4.210634146486748 1.7201159654312939 4 2.273778057347254 1.2385028959921214 5 1.3779926932022715 0.9382225849134156 6 0.9348859358486891 0.7638337448302303 7 0.7008457419583931 0.6680507303451588 8 0.5592277687148036 0.60921091997918 9 0.4448600074161942 0.5451987333857677 >10 3.964181926825977 12.089004408113365 >50 1.7397785586228742 17.447099578872397 >100 1.7310544116039557 39.95358854805999 >500 0.05739570330251842 5.323122655168016 >1k 0.025713275079528253 5.998212281148508 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 3762 0.1374806542208059 No Hit CTTCCGCCACGGCCGTCTCTGGAGAGCAGCAGCCATGGCCCTACGCT 3415 0.12479969010208725 No Hit CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 3404 0.12439769988506734 No Hit CTTTTCCAAGCGGCTGCCGAAGATGGCGGAGG 3189 0.11654061837058746 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.02437522497747941 0.0 0.0 0.0 0.0 2 0.043890022785536394 0.0 0.0 0.0 0.0 3 0.054926481470991835 0.0 0.0 0.0 0.0 4 0.06596294015644728 0.0 0.0 0.0 0.0 5 0.07718212166782086 0.0 0.0 0.0 0.0 6 0.09384644339155492 0.0 0.0 0.0 0.0 7 0.10393274338223606 0.0 0.0 0.0 0.0 8 0.11420176619883532 0.0 0.0 0.0 0.0 9 0.1234109966251094 0.0 0.0 0.0 0.0 10 0.1315604346610583 0.0 0.0 0.0 0.0 11 0.14022149660957797 0.0 0.0 0.0 0.0 12 0.14837093464552686 0.0 0.0 0.0 0.0 13 0.1567396400725775 0.0 0.0 0.0 0.0 14 0.164340909630772 0.0 0.0 0.0 0.0 15 0.1750484672295748 0.0 0.0 0.0 0.0 16 0.18425769765584887 0.0 0.0 0.0 0.0 17 0.196207770470895 0.0 0.0 0.0 0.0 18 0.21035051719695877 0.0 0.0 0.0 0.0 19 0.22146006501278145 0.0 0.0 0.0 0.0 20 0.23450647478333642 0.0 0.0 0.0 0.0 21 0.2446658639043848 0.0 0.0 0.0 0.0 22 0.2549348867209841 0.0 0.0 0.0 0.0 23 0.26739658344860096 0.0 0.0 0.0 0.0 24 0.27792141822148564 0.0 0.0 0.0 0.0 25 0.29074856060093884 0.0 0.0 0.0 0.0 26 0.3071936149335711 0.0 0.0 0.0 0.0 27 0.3194725888352699 0.0 0.0 0.0 0.0 28 0.3344558605605571 0.0 0.0 0.0 0.0 29 0.3459673985933997 0.0 0.0 0.0 0.0 30 0.36065831379721786 0.0 0.0 0.0 0.0 31 0.37308346595965114 0.0 0.0 0.0 0.0 32 0.38726275725089854 0.0 0.0 0.0 0.0 33 0.4007111572384734 0.0 0.0 0.0 0.0 34 0.41258814092315227 0.0 0.0 0.0 0.0 35 0.42223590613162987 0.0 0.0 0.0 0.0 36 0.43221257242676014 0.0 0.0 0.0 0.0 37 0.4399600202456891 0.0 0.0 0.0 0.0 38 0.44430882350254075 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGTA 10 1.6821192E-4 505.79016 44 TTAATCG 55 0.0 459.80923 44 TCGATAT 25 1.2754754E-8 404.63214 44 CTATCAT 1090 0.0 366.58185 44 CGTATCG 30 3.1684976E-8 337.19342 44 TATATTC 45 7.0940587E-10 280.99454 44 CCTATAT 90 0.0 280.99454 44 CATACAG 20 0.0013417143 252.89508 44 AATCGTT 40 1.3307908E-7 252.89508 44 GTGTAAT 65 2.3646862E-11 233.4416 44 GTATAAC 45 2.394172E-7 224.79562 44 ACAGTAA 40 4.212992E-5 189.67131 44 TATATTA 100 1.8189894E-12 177.02655 44 ATTCGAG 180 0.0 168.59673 44 TATAGAC 30 0.004514893 168.59671 44 TAATTGG 140 0.0 162.57541 44 ATCACAA 80 2.2115273E-8 158.05943 44 GTATCCG 145 0.0 156.96936 44 AATCTTG 210 0.0 156.5541 44 TGATAAG 65 1.4955549E-6 155.62773 44 >>END_MODULE