##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840920.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6563855 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.57883286574734 39.0 37.0 39.0 32.0 39.0 2 37.40709125963325 39.0 37.0 39.0 35.0 39.0 3 37.44122211718571 39.0 37.0 39.0 34.0 39.0 4 37.98633059383548 39.0 37.0 40.0 34.0 41.0 5 38.468835768005235 40.0 38.0 41.0 34.0 41.0 6 38.40018205764753 40.0 38.0 41.0 34.0 41.0 7 38.297347823801715 40.0 38.0 41.0 34.0 41.0 8 38.19683600567045 39.0 37.0 41.0 34.0 41.0 9 37.97738630728436 39.0 37.0 40.0 33.0 41.0 10 37.89202930290203 39.0 37.0 40.0 33.0 41.0 11 37.71442452644064 39.0 36.0 40.0 33.0 41.0 12 37.66029505526859 39.0 36.0 40.0 33.0 41.0 13 37.43683445170559 39.0 36.0 40.0 33.0 41.0 14 37.32007943502713 38.0 36.0 40.0 32.0 41.0 15 37.285335980151906 38.0 35.0 40.0 32.0 41.0 16 37.27245269738591 38.0 35.0 40.0 32.0 41.0 17 37.332950834532454 38.0 35.0 40.0 33.0 41.0 18 37.44993056671727 39.0 35.0 40.0 33.0 41.0 19 37.52805889222111 39.0 35.0 40.0 33.0 41.0 20 37.55251509973941 39.0 35.0 40.0 33.0 41.0 21 37.49726022284161 39.0 35.0 40.0 33.0 41.0 22 37.37667148344989 39.0 35.0 40.0 33.0 41.0 23 37.19067895314567 39.0 35.0 40.0 33.0 41.0 24 36.94361636568754 38.0 35.0 40.0 32.0 41.0 25 36.84193725980929 38.0 35.0 40.0 32.0 41.0 26 36.659835749335016 38.0 35.0 40.0 32.0 41.0 27 36.54812975096608 37.0 35.0 40.0 32.0 41.0 28 36.42271237228972 37.0 35.0 40.0 31.0 41.0 29 36.27656849385503 37.0 35.0 40.0 31.0 41.0 30 36.12678589291867 37.0 34.0 40.0 31.0 41.0 31 35.966599100011514 36.0 34.0 40.0 31.0 41.0 32 35.848138066789645 36.0 34.0 40.0 31.0 41.0 33 35.70682110404875 36.0 34.0 39.0 31.0 41.0 34 35.620408980465534 35.0 34.0 39.0 31.0 41.0 35 35.383097443540734 35.0 34.0 39.0 30.0 41.0 36 35.375277904940255 35.0 34.0 39.0 31.0 41.0 37 35.28954350856485 35.0 34.0 39.0 31.0 40.0 38 35.30973468332079 35.0 34.0 39.0 31.0 41.0 39 35.223801752695934 35.0 34.0 39.0 31.0 40.0 40 35.07573227645647 35.0 34.0 38.0 30.0 40.0 41 35.01020213273081 35.0 34.0 38.0 31.0 40.0 42 34.94254445265922 35.0 34.0 38.0 31.0 40.0 43 34.813716105210005 35.0 33.0 37.0 30.0 40.0 44 34.65538420797715 35.0 33.0 37.0 30.0 40.0 45 34.403521800599925 35.0 33.0 37.0 30.0 39.0 46 34.129652977873036 35.0 33.0 37.0 29.0 39.0 47 33.95825382634686 35.0 33.0 36.0 29.0 39.0 48 33.99793869658891 35.0 33.0 36.0 29.0 39.0 49 33.92160422119546 35.0 33.0 36.0 29.0 39.0 50 34.11045168741178 35.0 33.0 37.0 29.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 16.0 21 49.0 22 147.0 23 405.0 24 950.0 25 2576.0 26 5565.0 27 12209.0 28 26137.0 29 51318.0 30 94657.0 31 165436.0 32 269208.0 33 428546.0 34 649412.0 35 741575.0 36 1001026.0 37 1061953.0 38 926235.0 39 829912.0 40 296517.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 46.28427958874777 17.939381659101244 35.776338752150984 2 27.188199617450415 18.772169708197392 29.77073686118904 24.268893813163146 3 25.14827033808638 18.08048776214587 29.626797057521838 27.144444842245907 4 22.294779516000887 19.786025133096327 30.282356938110304 27.636838412792482 5 22.724085160321184 19.527488038660206 28.449501093488504 29.298925707530106 6 25.171107527512415 21.880114658230568 25.18142158838061 27.767356225876412 7 28.60939188936989 18.96781693075182 21.19589783747508 31.226893342403205 8 27.28609940347555 19.65434946384404 23.972528338910596 29.08702279376982 9 28.109776952720615 19.320719302909648 24.771251040737493 27.798252703632244 10 30.57730556205157 17.876415612471636 22.793008072238035 28.75327075323876 11 29.563252082808045 17.57407803798225 22.324975186075864 30.537694693133837 12 30.21795880621982 20.709887710804093 21.737850699017574 27.334302783958513 13 30.133237251584628 19.19283713610371 22.65289224091635 28.021033371395315 14 27.699773989522924 20.428437252194023 20.648079520342847 31.223709237940206 15 27.497895672588747 22.269367620095203 20.935456374340994 29.297280332975056 16 27.83414624485154 21.52724275597191 20.979470143688427 29.659140855488126 17 28.152130112563423 22.531500162633087 19.150910554849247 30.16545916995424 18 28.059593028791767 21.263754302921072 18.18128218859192 32.49537047969524 19 30.401859882645184 18.815162735922716 22.391323391513065 28.391653989919035 20 29.45410890399011 18.084448849037646 24.037596808582762 28.423845438389485 21 30.862153414418813 24.34627212209898 17.91465533592683 26.876919127555375 22 32.102796298821346 21.26989398760332 19.14204381419151 27.48526589938382 23 33.103244968086585 20.693830073942827 21.427271016803388 24.775653941167196 24 30.890901764283335 21.768747176773406 21.779015532792847 25.56133552615041 25 30.98299917495545 21.327094892391493 21.456694362400054 26.233211570253 26 30.878467594630248 22.428629542773507 21.70253271216688 24.99037015042936 27 31.263034773933047 22.836000565502985 19.648202518350523 26.25276214221345 28 31.280488967326235 21.038117987088256 21.145439777130708 26.535953268454797 29 31.370680251143586 23.638467003034492 20.922054559745185 24.06879818607674 30 30.715135213240114 23.402394157987754 20.204753065738515 25.677717563033614 31 29.311913758922664 21.76360979191829 21.840484942734335 27.083991506424702 32 28.533152644369412 22.410100616481536 22.9141039174802 26.142642821668844 33 27.71959748627197 20.108469756883025 24.06064436597136 28.111288390873646 34 30.211674868851553 19.931449343784013 22.89001986485963 26.966855922504802 35 26.67938090053704 20.79354451825502 22.810766122693742 29.716308458514195 36 26.352426025508606 20.678037785018034 25.51713610287627 27.45240008659709 37 25.235949573655848 24.387884260613724 23.62544546881322 26.750720696917206 38 26.69016822015438 21.110689018025944 23.093634719132574 29.1055080426871 39 28.33403366422897 21.27346387089773 23.308349435800743 27.08415302907256 40 26.567585613353607 21.394598904649758 24.809174690694434 27.228640791302205 41 27.877073466483804 21.698967053901537 20.962486480094146 29.46147299952051 42 26.521317397806026 22.907194316933502 21.892962176569675 28.678526108690793 43 27.741026298220824 21.062548503302462 21.656404611940584 29.540020586536137 44 25.691296812527636 22.59887406398589 21.70170461830922 30.008124505177257 45 28.180338167294387 19.203576356761854 26.64689005796785 25.96919541797591 46 26.343894717849743 22.445043439275228 23.09635372528007 28.114708117594954 47 25.339494182142904 22.136955367391188 25.00820423687075 27.51534621359516 48 25.687503014077862 20.3210432815064 21.248662401121955 32.742791303293785 49 25.826241558045805 23.11181179694862 20.65785859926884 30.40408804573673 50 24.833932161341373 22.727233842337142 24.52970614654177 27.90912784977972 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 46598.0 1 43123.5 2 48775.5 3 50417.5 4 38283.0 5 28996.0 6 20313.0 7 16319.5 8 16539.5 9 16179.0 10 14807.5 11 12795.5 12 10976.5 13 9678.5 14 8914.0 15 8609.5 16 8338.5 17 8977.5 18 10045.0 19 10611.5 20 11110.0 21 11512.5 22 11705.5 23 12841.5 24 14651.0 25 16661.5 26 20420.5 27 24725.0 28 26750.0 29 26704.0 30 29406.5 31 42874.5 32 64228.5 33 72639.5 34 75339.0 35 85469.0 36 91236.5 37 94663.5 38 101716.5 39 121248.0 40 145754.0 41 166818.0 42 191053.0 43 208875.0 44 215505.0 45 227792.5 46 248500.0 47 256614.5 48 280456.5 49 345198.5 50 415939.5 51 454664.5 52 457233.0 53 439369.5 54 424669.5 55 421934.5 56 432904.0 57 454970.5 58 465038.0 59 466246.0 60 475226.0 61 477745.5 62 461083.0 63 441695.0 64 430600.5 65 427942.5 66 409617.0 67 378868.5 68 352582.5 69 328348.5 70 302650.0 71 277779.5 72 263791.0 73 253418.0 74 237418.5 75 217693.0 76 190590.0 77 147159.5 78 114928.0 79 100538.0 80 82157.0 81 62885.5 82 48683.5 83 38501.0 84 30496.5 85 23394.0 86 16356.0 87 11367.5 88 7373.0 89 4538.0 90 2753.5 91 1313.0 92 902.5 93 792.0 94 595.5 95 389.5 96 370.5 97 367.0 98 191.0 99 7.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 42995.0 25 41008.0 26 36031.0 27 44375.0 28 49453.0 29 52163.0 30 52639.0 31 55549.0 32 61851.0 33 59286.0 34 56870.0 35 43767.0 36 40966.0 37 46156.0 38 47789.0 39 48871.0 40 50873.0 41 53744.0 42 72892.0 43 108396.0 44 307200.0 45 618506.0 46 726901.0 47 776642.0 48 1008094.0 49 1125678.0 50 935160.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.904837430378393 #Duplication Level Percentage of deduplicated Percentage of total 1 76.71293161207143 13.735325693218744 2 10.140629863147517 3.631326582825932 3 3.3710299979908904 1.8107323226086707 4 1.606478124751897 1.1505491863656743 5 0.9162196076029462 0.8202381562327917 6 0.6291507855200319 0.6758905520358621 7 0.46424940885741556 0.5818617134918906 8 0.33452701820012976 0.4791721501554046 9 0.2996642920481362 0.482889638953018 >10 3.0550887562997464 13.097562427747327 >50 1.384472792012352 17.97629571151337 >100 1.019856860409472 31.257094729649754 >500 0.04056531673235127 4.913055818617494 >1k 0.024140096460356274 7.595075696564753 >5k 7.466009214543177E-4 0.9282132593041929 >10k+ 2.4886697381810595E-4 0.8647163607151441 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 19406 0.2956494316221184 No Hit CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 8329 0.1268918950829962 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6998 0.10661417718703413 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.017687776466725726 0.0 0.0 0.0 0.0 2 0.03249614746212401 0.0 0.0 0.0 0.0 3 0.04293208792698803 0.0 0.0 0.0 0.0 4 0.05374890213144562 0.0 0.0 0.0 0.0 5 0.06435242704173082 0.0 0.0 0.0 0.0 6 0.07973972612131133 0.0 0.0 0.0 0.0 7 0.09191245083872206 0.0 0.0 0.0 0.0 8 0.10248550584983977 0.0 0.0 0.0 0.0 9 0.11167218044883685 0.0 0.0 0.0 0.0 10 0.11965529403071823 0.0 0.0 0.0 0.0 11 0.12712041932675233 0.0 0.0 0.0 0.0 12 0.13662702786700803 0.0 0.0 0.0 0.0 13 0.1458137024660051 0.0 0.0 0.0 0.0 14 0.15525937120792582 0.0 0.0 0.0 0.0 15 0.1658933660173785 0.0 0.0 0.0 0.0 16 0.17634454143182626 0.0 0.0 0.0 0.0 17 0.1881668623088109 0.0 0.0 0.0 0.0 18 0.21467567458452388 0.0 0.0 0.0 0.0 19 0.22537060919231153 0.0 0.0 0.0 0.0 20 0.23525809147216079 0.0 0.0 0.0 0.0 21 0.24686712305497302 0.0 0.0 0.0 0.0 22 0.25652608109106617 0.0 0.0 0.0 0.0 23 0.26741907004344245 0.0 0.0 0.0 0.0 24 0.27872340263457984 0.0 0.0 0.0 0.0 25 0.28922028289777885 0.0 0.0 0.0 0.0 26 0.3034344908594111 0.0 0.0 0.0 0.0 27 0.31316962364342293 0.0 0.0 0.0 0.0 28 0.3251595289658288 0.0 0.0 0.0 0.0 29 0.3367990304478085 0.0 0.0 0.0 0.0 30 0.3497639725435739 0.0 0.0 0.0 0.0 31 0.3616929380676447 0.0 0.0 0.0 0.0 32 0.3751301636005061 0.0 0.0 0.0 0.0 33 0.3856727487124563 0.0 0.0 0.0 0.0 34 0.395179357252712 0.0 0.0 0.0 0.0 35 0.40395468821294805 0.0 0.0 0.0 0.0 36 0.41297377836652394 0.0 0.0 0.0 0.0 37 0.4192505775950261 0.0 0.0 0.0 0.0 38 0.4237448877222303 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATACC 40 0.0 241.50372 44 CTATCAT 8025 0.0 206.18636 44 TCGTACA 95 0.0 188.84503 44 ACATTGG 1500 0.0 149.96233 44 ACTTCTA 2355 0.0 124.817215 44 ATTACGA 30 2.5632653E-7 104.882515 43 CCCATAC 1800 0.0 101.96824 44 ACCACTC 960 0.0 100.62656 44 CCTATCA 8605 0.0 87.90386 43 CATGACC 995 0.0 85.99128 44 AATCTAC 145 0.0 85.656494 44 TTAATCG 20 3.12207E-5 84.48512 42 GGATAAT 925 0.0 82.998924 43 ACCCATA 50 0.0011424279 82.80128 44 CATACAA 425 0.0 77.93061 44 TCCGCAC 420 0.0 76.414406 43 CCCTATC 10435 0.0 74.405205 42 AATTGCC 500 0.0 74.25682 43 TTACGAG 95 2.2812092E-6 72.632706 44 CCAGAAT 650 0.0 72.18573 44 >>END_MODULE