ERR840918.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840918.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8557567
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA	27689	0.3235615917468131	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA	21820	0.2549790144792322	No Hit
CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC	15368	0.17958375318592304	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	15103	0.1764870786287738	No Hit
CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC	13721	0.16033762867413134	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10685	0.12486025525713092	No Hit
TTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10065	0.11761520534983834	No Hit
CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG	9788	0.11437830402028987	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT	9356	0.10933014021391826	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAAGCCA	10345	0.0	115.07881	44
CTATCAT	10545	0.0	102.16132	44
TTAAGCC	10045	0.0	84.3364	43
AACCGGT	60	5.158654E-6	63.310482	44
ACGGTAG	70	4.4929038E-10	61.161213	43
ATTAAGC	13055	0.0	60.90848	42
CCTATCA	13155	0.0	57.889286	43
CTATCGT	80	4.2544343E-7	56.979435	44
GGCCGAG	7480	0.0	56.8787	43
AGGCCGA	9430	0.0	54.81698	42
CCTTAGC	6230	0.0	54.28916	43
CGCGATA	45	0.008013404	50.648384	44
AACCTTA	6270	0.0	49.96685	41
CCCTATC	15950	0.0	49.436398	42
GATACGA	65	1.1395714E-6	49.39944	43
AACGGTA	80	0.0	48.122593	42
CGTATGT	110	0.0	47.19092	41
ACTTCTA	3075	0.0	47.189472	44
GATTAAG	15350	0.0	47.105923	41
CCCCTAT	15030	0.0	46.869556	41