##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840910.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2081041 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.07937854179711 38.0 35.0 39.0 31.0 39.0 2 36.734054735106135 39.0 37.0 39.0 32.0 39.0 3 36.84323566907139 39.0 35.0 39.0 33.0 39.0 4 36.92378958415524 38.0 35.0 39.0 33.0 39.0 5 37.62245001419962 39.0 36.0 40.0 33.0 41.0 6 37.63818396658211 39.0 36.0 40.0 33.0 41.0 7 37.68389474306369 39.0 36.0 40.0 33.0 41.0 8 37.594162248605386 39.0 36.0 40.0 33.0 41.0 9 37.47336549351983 39.0 36.0 40.0 33.0 41.0 10 37.46223452589353 39.0 36.0 40.0 33.0 41.0 11 37.34231041099142 39.0 35.0 40.0 33.0 41.0 12 37.52174128236781 39.0 36.0 40.0 33.0 41.0 13 37.79714959964748 39.0 36.0 40.0 33.0 41.0 14 37.80751892922821 39.0 36.0 41.0 33.0 41.0 15 37.8777683861106 39.0 36.0 41.0 33.0 41.0 16 37.93569420304549 39.0 36.0 41.0 33.0 41.0 17 37.919367758732285 39.0 36.0 41.0 33.0 41.0 18 37.93415795267849 40.0 36.0 41.0 33.0 41.0 19 37.886091143807356 39.0 36.0 41.0 33.0 41.0 20 37.8763964765711 39.0 36.0 41.0 33.0 41.0 21 37.84530818950708 39.0 36.0 41.0 33.0 41.0 22 37.780875532966434 40.0 36.0 41.0 33.0 41.0 23 37.749346120523334 39.0 35.0 41.0 33.0 41.0 24 37.66833666419835 39.0 35.0 41.0 33.0 41.0 25 37.53709914449931 39.0 35.0 41.0 33.0 41.0 26 37.49421785421785 39.0 35.0 41.0 33.0 41.0 27 37.479228859823166 39.0 35.0 41.0 33.0 41.0 28 37.49446056266147 39.0 35.0 41.0 33.0 41.0 29 37.425234577260845 39.0 35.0 41.0 32.0 41.0 30 37.436082599801885 39.0 35.0 41.0 33.0 41.0 31 37.29666599319147 39.0 35.0 41.0 32.0 41.0 32 37.264624740433106 39.0 35.0 41.0 32.0 41.0 33 37.19317462771165 39.0 35.0 40.0 32.0 41.0 34 37.205792922632845 39.0 35.0 40.0 32.0 41.0 35 37.157179709542675 39.0 35.0 40.0 32.0 41.0 36 37.100621002648325 39.0 35.0 40.0 32.0 41.0 37 37.07614767060809 39.0 35.0 40.0 32.0 41.0 38 37.02728493911804 38.0 35.0 40.0 32.0 41.0 39 36.90092137565635 38.0 35.0 40.0 31.0 41.0 40 36.78443772205205 38.0 35.0 40.0 31.0 41.0 41 36.731157803226466 38.0 35.0 40.0 31.0 41.0 42 36.56493663657959 38.0 35.0 40.0 31.0 41.0 43 36.45442559446761 38.0 34.0 40.0 31.0 41.0 44 36.43776915050939 38.0 34.0 40.0 31.0 41.0 45 36.33277306594687 37.0 34.0 40.0 31.0 41.0 46 36.233710815119665 37.0 34.0 40.0 31.0 41.0 47 36.069992236982266 37.0 34.0 40.0 30.0 41.0 48 35.983411064976956 37.0 34.0 40.0 30.0 41.0 49 36.031536527871516 37.0 34.0 40.0 30.0 41.0 50 35.894181527710394 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 8.0 14 372.0 15 2938.0 16 1446.0 17 24.0 18 0.0 19 4.0 20 12.0 21 31.0 22 79.0 23 213.0 24 462.0 25 1072.0 26 2203.0 27 4347.0 28 8752.0 29 16475.0 30 29618.0 31 50608.0 32 80486.0 33 123902.0 34 172692.0 35 149663.0 36 199791.0 37 251109.0 38 299641.0 39 405429.0 40 279664.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 56.56933236779093 13.221027360825662 30.20964027138341 2 26.634650638790873 26.803172066287978 29.160165513317615 17.402011781603534 3 27.552941052098447 18.611646767170853 28.51654532515217 25.31886685557853 4 22.247134967547492 21.56617769664317 30.471480379290945 25.715206956518394 5 20.299407844439394 27.546886390032682 28.147066780519943 24.00663898500798 6 21.386075526623454 31.787936902732817 25.570808071537275 21.255179499106458 7 27.702001065812738 30.309109719606674 22.574375036339987 19.4145141782406 8 26.427831071084135 27.017535935140153 25.16038847865083 21.394244515124882 9 21.506159657594445 27.546117544056077 28.491125355050666 22.45659744329881 10 23.822164003496326 27.806708277251623 25.7682092760306 22.602918443221444 11 26.2858348297799 26.525186192871743 26.623166002015335 20.565812975333017 12 27.03959220409401 25.270429559052417 26.124473280439936 21.56550495641364 13 24.8281509110104 25.07105818674404 27.463754918812267 22.63703598343329 14 20.165052010027672 28.321306499968046 29.280009379920912 22.233632110083366 15 20.126561658323887 28.90298653414325 28.31630900112011 22.654142806412754 16 20.440010552411028 35.323138756036045 23.410639194518513 20.826211497034418 17 23.527119359974165 32.346743769104016 23.338944307200098 20.787192563721714 18 21.18795352902706 28.340047120647792 25.05380720514396 25.418192145181184 19 21.76617375630754 27.47836299236776 26.48193860668771 24.273524644636986 20 23.822500373611092 26.286891992997734 26.50298576529727 23.387621868093902 21 24.044552702229318 26.714995043346097 24.60499336630081 24.63545888812378 22 22.376108880122977 28.698281292872174 25.42448707161464 23.50112275539021 23 22.477836813402526 29.27952885118554 25.721357724331234 22.521276611080705 24 24.4804403180908 28.49684364700167 24.37712663998451 22.64558939492302 25 22.954030036977084 28.11498254801838 24.744081196519097 24.18690621848544 26 23.577199995110444 28.47008202232083 26.706320974977693 21.246397007591035 27 24.556060839488865 26.637629384325283 26.8886087650328 21.917701011153053 28 24.007240289849893 28.745946450450884 25.438766330864965 21.808046928834266 29 24.68973491006726 26.656568288324873 27.135949543447612 21.51774725816026 30 26.368626732489876 28.364161116524794 24.69376907651545 20.573443074469886 31 23.394903857185355 29.075345629839756 25.456550189300682 22.07320032367421 32 21.841978743645086 27.968320052373695 26.429126730019743 23.760574473961476 33 21.243468851445353 29.78641727211831 27.12603699695986 21.84407687947648 34 25.143559379999925 26.84084253332939 26.447257594180922 21.568340492489764 35 23.294208281629196 28.82644209406865 25.740575105288034 22.138774519014127 36 22.875629036266577 28.53330139233553 26.184477202728424 22.40659236866947 37 22.133379938347517 30.417314966849705 26.44724771007715 21.00205738472563 38 25.730056551397258 28.889466653613464 23.507855727868535 21.872621067120747 39 23.779355231196043 28.880305298719005 25.588345061763018 21.751994408321938 40 22.35765545683553 30.16349559568437 24.92157108113843 22.55727786634167 41 24.375292938628604 30.924275570317896 23.88101560107439 20.819415889979112 42 24.11315857830662 28.777200356459048 25.31474015763731 21.79490090759702 43 21.806380836132313 30.303855463588842 25.86716199343677 22.022601706842075 44 21.227905977226648 31.32214930201126 25.701141495055975 21.74880322570612 45 23.822279215816486 26.984087910074795 27.6295594477855 21.564073426323215 46 24.37700443060267 28.49240170179634 24.79776106260312 22.332832804997867 47 23.670157480037535 29.286248653803465 24.256376890400517 22.78721697575848 48 23.0599506687906 27.48499766169825 26.278881656521925 23.17617001298922 49 22.159100912585465 29.396532892527492 25.897082269628413 22.547283925258633 50 21.499711681866668 30.856329358953626 26.01111454152516 21.632844417654546 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 18381.0 1 14976.5 2 9897.5 3 7501.0 4 6678.0 5 6718.0 6 6787.5 7 6551.0 8 6619.5 9 6779.0 10 6512.0 11 6296.0 12 6218.0 13 6213.5 14 6636.5 15 8628.0 16 10075.5 17 10356.5 18 11536.5 19 15648.0 20 18660.0 21 18856.0 22 19932.0 23 24209.5 24 27566.0 25 31150.0 26 36299.0 27 43748.5 28 52165.0 29 60226.5 30 66515.5 31 67333.0 32 68152.5 33 77377.5 34 88347.0 35 87657.0 36 85976.5 37 94093.5 38 100410.5 39 99750.5 40 100922.0 41 107948.0 42 118071.0 43 129797.0 44 138721.0 45 133136.5 46 124895.0 47 119172.0 48 115838.0 49 123089.5 50 134736.0 51 136814.0 52 134056.5 53 129228.5 54 123114.5 55 124033.5 56 121267.0 57 113771.5 58 106052.0 59 94373.5 60 85179.0 61 76718.0 62 68302.0 63 63111.0 64 60249.5 65 56149.0 66 50118.0 67 46744.5 68 40155.5 69 31879.0 70 28244.5 71 25329.0 72 20644.5 73 17660.0 74 14299.0 75 11157.0 76 9334.0 77 7711.5 78 6212.5 79 4808.5 80 3769.5 81 3101.5 82 2591.5 83 1770.5 84 1180.0 85 922.5 86 550.5 87 283.5 88 258.5 89 338.5 90 330.5 91 289.0 92 156.0 93 27.0 94 10.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 16519.0 25 19347.0 26 13534.0 27 17357.0 28 14623.0 29 12925.0 30 16854.0 31 14702.0 32 14480.0 33 13797.0 34 16192.0 35 15550.0 36 12674.0 37 13214.0 38 15089.0 39 16214.0 40 15916.0 41 16517.0 42 17088.0 43 20154.0 44 21510.0 45 20609.0 46 23230.0 47 50037.0 48 119354.0 49 309213.0 50 1224342.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.339089864872552 #Duplication Level Percentage of deduplicated Percentage of total 1 69.59224900265836 7.19520516337072 2 13.182556333460907 2.725912691607943 3 5.246488809870607 1.6273175784090137 4 2.737252966547402 1.132028176160903 5 1.5103192627534248 0.780766329112786 6 1.004421658703475 0.6230883474935748 7 0.7140343601464746 0.5167725791312822 8 0.569131593860376 0.4707442155088461 9 0.43599153242402255 0.4056980070649918 >10 3.091022819005362 6.52430702970239 >50 0.4857504523890764 3.567502969051659 >100 0.7639192104696244 19.734434272217626 >500 0.5944173795751485 44.543997058130394 >1k 0.07151584098013505 9.511196645209404 >5k 9.287771555861696E-4 0.6410289378284589 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 7148 0.34348194004827387 No Hit AATTCGTGGAGAAAGAAATGGCTCC 6203 0.2980719745550424 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 4225 0.20302339069725198 No Hit ATCAAGGGAAAGGCAAGACTGGGACGTCTAGTCCACAGGAAGACCTGCAC 3648 0.175296882665935 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 3367 0.16179402520181005 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 2571 0.1235439378657124 No Hit CAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGAT 2452 0.11782564591471288 No Hit AACAAGAGCTGGAAGGAATGTCTCCAGATGCTAATAAGCTTGCAGGACTT 2344 0.11263593557262928 No Hit TACCACACTACCCTGTTGACACAGCCTAGATCCAGAGTTCAGAAGACCT 2337 0.1122995654578646 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 2324 0.11167487810187304 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT 2298 0.11042550338988998 No Hit ACATCAGAAATCTTTAGTTCCTGATGAATTAAAAAAAGAGGTACTAGTTC 2144 0.10302536086506706 No Hit AGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCG 2116 0.10167988040600834 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.051080204570693226 0.0 0.0 0.0 0.0 2 0.08909002753910182 0.0 0.0 0.0 0.0 3 0.11532689649074669 0.0 0.0 0.0 0.0 4 0.14699374015216424 0.0 0.0 0.0 0.0 5 0.18524382748826188 0.0 0.0 0.0 0.0 6 0.2414176366539631 0.0 0.0 0.0 0.0 7 0.2939874803043285 0.0 0.0 0.0 0.0 8 0.3563601101564073 0.0 0.0 0.0 0.0 9 0.4120533905867304 0.0 0.0 0.0 0.0 10 0.4672180894081376 0.0 0.0 0.0 0.0 11 0.5265633882273343 0.0 0.0 0.0 0.0 12 0.5896568111824803 0.0 0.0 0.0 0.0 13 0.6451578801186522 0.0 0.0 0.0 0.0 14 0.7154111812309321 0.0 0.0 0.0 0.0 15 0.7817721995866492 0.0 0.0 0.0 0.0 16 0.8494786984014251 0.0 0.0 0.0 0.0 17 0.9211735857198392 0.0 0.0 0.0 0.0 18 0.9801825144242713 0.0 0.0 0.0 0.0 19 1.0538475695577358 0.0 0.0 0.0 0.0 20 1.1299633212416287 0.0 0.0 0.0 0.0 21 1.1950749648853627 0.0 0.0 0.0 0.0 22 1.2541799993368703 0.0 0.0 0.0 0.0 23 1.3099213326407313 0.0 0.0 0.0 0.0 24 1.3635002866353907 0.0 0.0 0.0 0.0 25 1.4192896728127893 0.0 0.0 0.0 0.0 26 1.4760401164609442 0.0 0.0 0.0 0.0 27 1.5250540474695116 0.0 0.0 0.0 0.0 28 1.5739238198574657 0.0 0.0 0.0 0.0 29 1.6355276037329394 0.0 0.0 0.0 0.0 30 1.6895390335894391 0.0 0.0 0.0 0.0 31 1.7469622174671233 0.0 0.0 0.0 0.0 32 1.8018385990473038 4.805287353781112E-5 0.0 0.0 0.0 33 1.858973465683761 4.805287353781112E-5 0.0 0.0 0.0 34 1.9191356633531007 4.805287353781112E-5 0.0 0.0 0.0 35 1.9836226196408433 4.805287353781112E-5 0.0 0.0 0.0 36 2.0438809230572583 4.805287353781112E-5 0.0 0.0 0.0 37 2.1004872080848 4.805287353781112E-5 0.0 0.0 0.0 38 2.1581026034566353 4.805287353781112E-5 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGACAC 15 0.0022621946 69.707504 44 ACAAGCG 15 0.0022621946 69.707504 44 TCGCATC 25 2.9126422E-6 69.7075 44 ACCGACT 115 0.0 69.7075 44 ATAGACC 55 0.0 69.7075 44 CGATTAT 55 0.0 69.7075 44 CCGCGTA 75 0.0 69.7075 44 CAATCGT 75 0.0 69.7075 44 TATCGTC 25 2.9126422E-6 69.7075 44 TACGGAT 75 0.0 65.06033 44 TTGCGTG 65 0.0 64.34538 44 CGGCACA 160 0.0 63.17242 44 ATCGGGA 90 0.0 61.96222 44 TCTACGG 130 0.0 61.664326 44 GCCCGAC 85 0.0 61.506615 44 TTCCGTT 110 0.0 60.201927 44 GACGTGT 30 8.590992E-6 58.089584 44 ATAGAAC 120 0.0 58.089584 44 TACTGCG 80 0.0 56.637344 44 AACCTAT 100 0.0 55.766 44 >>END_MODULE