ERR840906.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840906.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16924837
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA	167205	0.987926796577125	No Hit
AAGCAGTGGTATCAACGCAGAGTG	44514	0.2630099185002491	No Hit
AGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA	41082	0.24273202749308603	No Hit
AGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA	35699	0.2109266990281797	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC	30768	0.1817920018963846	No Hit
AGTGCAGTGCTATGCTTGGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAA	30685	0.18130159835512744	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT	30179	0.17831190929637905	No Hit
AGTGCAGTGCTATGCTTGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA	26055	0.15394535261993955	No Hit
AAGCAGTGGTATCAACGCAGAGTGCAG	22801	0.13471917041209908	No Hit
CAGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA	22520	0.13305888854350562	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAA	21411	0.12650638821514204	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAA	21142	0.12491700806335684	No Hit
AGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA	20253	0.11966437254314474	No Hit
AGTGCAGTGCTATGCTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20139	0.11899080623346624	No Hit
AGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA	19645	0.11607201889152612	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAA	19439	0.11485487275298427	No Hit
AGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAA	18138	0.10716794495568849	No Hit
AAGCAGTGGTATCAACGCAGAGTGCAGTGCTATGCTTGGGAAGCAGTGGT	17569	0.10380602188369671	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA	17232	0.1018148653366647	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	16989	0.10037910557129737	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAAGCCA	20105	0.0	78.93542	44
CCGATTA	120	0.0	71.60857	44
TTAAGCC	20915	0.0	52.775627	43
TAATGCG	200	0.0	52.01043	44
ACCGATT	150	0.0	48.612263	43
ATTAAGC	20550	0.0	48.545223	42
CTATCAT	5805	0.0	47.135246	44
CGTACGT	165	0.0	46.92037	40
CGGGTAT	155	0.0	46.685375	44
CGAGTAT	60	0.0	46.54724	34
AATCGCA	1835	0.0	46.335556	44
TATACGG	80	6.528353E-9	45.22646	44
GATTAAG	21785	0.0	44.69735	41
TACGATA	100	0.0	43.025974	25
CGAGTTA	130	0.0	42.8247	41
ACCTTAG	5195	0.0	41.836033	42
GACGATA	270	0.0	41.74262	33
GTACGTT	100	0.0	41.289925	40
CGTTCGA	595	0.0	40.85064	43
AGATTAA	23365	0.0	40.83267	40