##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840902.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1363158 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.001879459314324 38.0 35.0 39.0 31.0 39.0 2 36.726749943880314 39.0 35.0 39.0 33.0 39.0 3 36.82892298618356 39.0 35.0 39.0 33.0 39.0 4 36.91414274794265 39.0 35.0 39.0 33.0 40.0 5 37.628324816345575 39.0 35.0 40.0 33.0 41.0 6 37.61289887159082 39.0 35.0 40.0 33.0 41.0 7 37.673816241404154 39.0 36.0 40.0 33.0 41.0 8 37.5611411149698 39.0 35.0 40.0 33.0 41.0 9 37.35901487575175 39.0 35.0 40.0 32.0 41.0 10 37.425787766348435 39.0 35.0 40.0 33.0 41.0 11 37.15491821197543 38.0 35.0 40.0 32.0 41.0 12 37.36028838916692 39.0 35.0 40.0 33.0 41.0 13 37.54113683080025 39.0 35.0 41.0 33.0 41.0 14 37.58704273459129 39.0 35.0 41.0 33.0 41.0 15 37.66660577864048 39.0 35.0 41.0 33.0 41.0 16 37.65224427395797 39.0 35.0 41.0 33.0 41.0 17 37.669306859512986 39.0 35.0 41.0 33.0 41.0 18 37.64883161012883 39.0 35.0 41.0 33.0 41.0 19 37.63148219061914 39.0 35.0 41.0 33.0 41.0 20 37.62723103264625 39.0 35.0 41.0 33.0 41.0 21 37.60947006876679 39.0 35.0 41.0 33.0 41.0 22 37.38065286635885 39.0 35.0 41.0 32.0 41.0 23 37.40718317319049 39.0 35.0 41.0 32.0 41.0 24 37.23819689280333 39.0 35.0 41.0 32.0 41.0 25 37.16977712241739 39.0 35.0 41.0 32.0 41.0 26 37.02761731033942 39.0 35.0 41.0 31.0 41.0 27 36.98833288505086 39.0 35.0 41.0 31.0 41.0 28 36.95452044495845 39.0 35.0 41.0 31.0 41.0 29 36.948216047930536 38.0 35.0 40.0 31.0 41.0 30 36.890535981057496 38.0 35.0 40.0 31.0 41.0 31 36.68006622036962 38.0 35.0 40.0 31.0 41.0 32 36.63177987070625 38.0 35.0 40.0 31.0 41.0 33 36.631570616693615 38.0 35.0 40.0 31.0 41.0 34 36.62673477070718 38.0 35.0 40.0 31.0 41.0 35 36.53986734888466 38.0 35.0 40.0 31.0 41.0 36 36.43406983470705 38.0 34.0 40.0 31.0 41.0 37 36.43798880582078 37.0 34.0 40.0 31.0 41.0 38 36.31093015414774 37.0 34.0 40.0 31.0 41.0 39 36.138837526194976 37.0 34.0 40.0 31.0 41.0 40 36.153251024799175 37.0 34.0 40.0 31.0 41.0 41 36.03991654098984 37.0 34.0 40.0 31.0 41.0 42 35.910202708012314 36.0 34.0 40.0 30.0 41.0 43 35.77372310616612 36.0 34.0 39.0 30.0 41.0 44 35.68962056126673 36.0 34.0 39.0 30.0 41.0 45 35.53085900221503 36.0 34.0 39.0 30.0 41.0 46 35.36433482142857 35.0 34.0 39.0 30.0 41.0 47 35.25952168298671 35.0 34.0 39.0 30.0 41.0 48 35.15404173496584 35.0 34.0 39.0 30.0 40.0 49 35.29587115320246 35.0 34.0 39.0 30.0 40.0 50 35.24211624894455 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 11.0 14 394.0 15 1789.0 16 274.0 17 3.0 18 0.0 19 1.0 20 1.0 21 15.0 22 63.0 23 178.0 24 503.0 25 1157.0 26 2546.0 27 5100.0 28 9590.0 29 17157.0 30 28513.0 31 44463.0 32 63876.0 33 91433.0 34 125211.0 35 101544.0 36 133614.0 37 165623.0 38 189052.0 39 231497.0 40 149550.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 51.65857516149999 13.702813613682347 34.638611224817666 2 27.571198643150684 23.227681604040033 28.093075050727794 21.10804470208149 3 29.44919077612426 15.085705398787228 25.571503816872294 29.893600008216215 4 21.51951571277871 18.58331902831513 32.574800573374475 27.322364685531685 5 20.503345907077534 27.3324148778058 28.01142640838406 24.1528128067326 6 20.458523516716333 30.89333738275387 28.406538346985457 20.241600753544343 7 29.200356818505263 28.849040243317354 22.40569325052562 19.544909687651764 8 26.269735423186454 25.842638931070354 24.94831853680938 22.939307108933814 9 23.200465389925455 26.357179431878038 26.850885957460548 23.591469220735966 10 26.99731065657833 23.13165458442822 25.576712310678584 24.29432244831487 11 26.93187436819503 24.32359271632489 26.82264271639825 21.921890199081837 12 27.432109850802327 21.888218387010163 27.16427589465051 23.515395867537 13 25.179766395384835 19.847002328416806 29.947225486700734 25.026005789497624 14 20.2228941912823 23.544079263005464 28.92900162710412 27.304024918608118 15 20.491975251584922 25.536438182514427 29.474939808884958 24.496646757015693 16 22.554392080741927 31.550928065565397 21.993121853812983 23.901557999879692 17 23.493608224431796 32.013603705513226 22.368573562272314 22.124214507782664 18 22.237480908302633 27.694001722470908 22.37796352293718 27.69055384628928 19 22.797944185486934 25.000623552075403 26.056553972466872 26.14487828997079 20 24.504716254462064 22.36409865914296 26.641152382922595 26.490032703472377 21 24.442727842260396 24.658110065010806 26.455407223520677 24.443754869208117 22 23.77339970861778 24.811283798356463 27.87651908289428 23.538797410131473 23 26.34955008883783 24.243998127876594 26.138349332946 23.26810245033958 24 26.087218062763085 23.664828288430247 27.116225705310754 23.13172794349591 25 25.914630764486603 24.282334775602745 25.476625548061143 24.32640891184951 26 24.537305415356382 28.335925930070765 24.438674828683446 22.68809382588941 27 24.375096731344563 25.454656102226437 26.731284457019726 23.438962709409275 28 26.191100527929645 27.827182238039732 21.92044829305779 24.061268940972827 29 25.207679640215456 26.790062540672828 25.376481407363727 22.625776411747992 30 26.77182072320595 26.572118276774052 23.560042279069553 23.096018720950447 31 22.53127830075915 27.49788389164591 26.009405099061905 23.96143270853304 32 25.06664990927443 24.62755386585184 27.25372524684424 23.052070978029487 33 20.886526253975866 27.783700193342465 26.585815801532338 24.74395775114933 34 24.578470658048378 28.428146196106457 26.081938604271283 20.91144454157388 35 24.1696833544012 23.98968787641544 27.477512634684814 24.363116134498544 36 23.02223296788175 25.73354676809415 29.086138450791417 22.158081813232684 37 24.357592834810287 25.84138120910534 27.882019135167553 21.919006820916824 38 23.778932069968683 26.11798126551349 27.373734292782615 22.72935237173521 39 26.423107548483603 25.98533081461788 27.074108871142382 20.51745276575613 40 25.567721533332943 25.75089677797935 25.889327565523768 22.792054123163947 41 23.42932192094596 26.70849214057627 25.288266371082674 24.573919567395098 42 23.741146685708625 27.462784476249375 25.548538199510055 23.247530638531945 43 24.66552768274267 27.45911430057274 25.891904618576937 21.983453398107656 44 23.86571871547797 27.632597240588026 26.192998660251426 22.308685383682576 45 24.701463892185416 26.997401124770658 26.667787681049692 21.63334730199423 46 22.178839285714286 26.825267857142858 26.61625 24.37964285714286 47 25.467408330414997 26.90286611955844 25.530118552181147 22.099606997845413 48 21.96969342371447 28.621057331984044 25.161460639551702 24.247788604749783 49 22.309327237248844 28.30658524276392 25.995475605471967 23.388611914515263 50 25.272581381078997 26.584354694063784 26.548036732274998 21.59502719258222 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2695.0 1 2384.0 2 1747.0 3 1467.5 4 1490.0 5 1534.5 6 1594.5 7 1336.0 8 1193.5 9 1753.5 10 2314.0 11 2435.0 12 2682.0 13 3551.5 14 4089.0 15 3775.5 16 3667.5 17 5162.5 18 6443.5 19 6044.5 20 5719.0 21 8942.0 22 12250.0 23 12172.5 24 12354.0 25 15448.5 26 19140.0 27 25127.5 28 30364.5 29 34328.0 30 39296.5 31 42039.0 32 43763.5 33 49168.5 34 54691.5 35 55720.0 36 59111.0 37 60680.5 38 60261.5 39 67112.0 40 73858.0 41 72231.5 42 70771.5 43 73703.0 44 77969.5 45 78266.0 46 74997.5 47 76589.5 48 81047.5 49 77049.0 50 72840.5 51 75948.5 52 79623.5 53 74668.0 54 73526.5 55 81414.5 56 77966.0 57 72742.5 58 74687.0 59 73566.0 60 68951.5 61 63035.0 62 56662.5 63 53436.5 64 50499.5 65 44262.0 66 39461.5 67 39242.0 68 40722.5 69 37986.5 70 32078.5 71 27036.0 72 23915.0 73 22165.5 74 21465.5 75 19193.0 76 15072.0 77 11266.5 78 8077.5 79 6966.5 80 5522.5 81 3670.0 82 3145.0 83 3282.5 84 2746.0 85 2220.5 86 1551.0 87 987.5 88 761.0 89 644.0 90 414.5 91 116.5 92 23.0 93 8.0 94 5.5 95 4.0 96 4.0 97 4.0 98 2.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 10891.0 25 11912.0 26 9349.0 27 11512.0 28 10266.0 29 9294.0 30 15737.0 31 11127.0 32 9509.0 33 9793.0 34 10959.0 35 10270.0 36 8510.0 37 10972.0 38 12445.0 39 9403.0 40 10270.0 41 10191.0 42 11235.0 43 10790.0 44 12847.0 45 15876.0 46 14917.0 47 36866.0 48 103226.0 49 202283.0 50 762708.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.83802837416375 #Duplication Level Percentage of deduplicated Percentage of total 1 68.96703447040728 6.784996420017962 2 13.443031800013408 2.64505856566635 3 5.31426848149055 1.568457723264844 4 2.7170822842431437 1.0692293042928682 5 1.664855465887034 0.8189447656139125 6 1.061661939710917 0.6266796171987437 7 0.7241762905097934 0.4987126825752398 8 0.5576589586958861 0.4389011727005392 9 0.4532278254265489 0.401298138585623 >10 3.1410935252176606 6.320633535285519 >50 0.4979219452018718 3.501817723879234 >100 0.7431559571351289 17.9814193202842 >500 0.604513020297482 43.44298470692187 >1k 0.10957264362975322 13.528120328896472 >5k 7.453921335357362E-4 0.3727459948166219 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 5083 0.3728841410900277 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 4341 0.3184517128608716 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA 3492 0.2561698643884275 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGG 3217 0.23599612077250032 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 2601 0.19080693507282354 No Hit CCCTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAGGAAGCTAA 2572 0.1886795221096894 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 2297 0.16850577849376228 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGAGA 2192 0.16080307638586283 No Hit TACTCAATTGATCCAATAACTTGACCAACGGAACAAGTTACCCTAGGGAT 2057 0.15089960224713495 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 2024 0.14847875301322372 No Hit CTCTTTTCCGTGGCGCCTCGGAGGCGTTCAGCTGCTTCAAGATGAAGCT 1953 0.1432702592069298 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 1823 0.13373358040667332 No Hit AGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATG 1807 0.13255983532356483 No Hit CCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCG 1793 0.1315328083758449 No Hit CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 1645 0.1206756663570914 No Hit TTCTGAAACCAACTTTTTACTTCCATCATCCTTTTTTTAGCCTGTTGCTT 1557 0.11422006839999471 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAAT 1546 0.11341311865535764 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGG 1537 0.1127528870461091 No Hit CATTTTCCGGCAAGCCAAGGGCTGTCTGTGCCTCAGGAGTGGGGTCAG 1488 0.10915829272908936 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 1472 0.10798454764598088 No Hit CTCTTTTCCTCCTTGGCTGTCTGAAGATAGATCGCCATCATGAACGACAC 1471 0.10791118857828659 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 1463 0.10732431603673236 No Hit AAGCAAGGAGCAGGCCAAAGCCACCCTTCTGGAGGACCAGCAAGACCCTT 1404 0.1029961310427698 No Hit AGGTACATGCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTG 1391 0.10204246316274415 No Hit AGATCCTCCCACTTCAGCCTCCTGAGTAGCTGGGACTACAGATACGCAC 1388 0.10182238595966132 No Hit ATGGACCTTTCTGTGAGCACACACACCTGTAGTCCTAGCTACTCAACTAG 1384 0.10152894968888419 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0608880261862528 0.0 0.0 0.0 0.0 2 0.08715057242080522 0.0 0.0 0.0 0.0 3 0.1086447792552294 0.0 0.0 0.0 0.0 4 0.13820848353602444 0.0 0.0 0.0 0.0 5 0.17591504433088462 0.0 0.0 0.0 0.0 6 0.2379768156002459 0.0 0.0 0.0 0.0 7 0.2880810588354395 0.0 0.0 0.0 0.0 8 0.3447876181631183 0.0 0.0 0.0 0.0 9 0.3982663785122488 0.0 0.0 0.0 0.0 10 0.45548645131378757 0.0 0.0 0.0 0.0 11 0.5127065241153264 0.0 0.0 0.0 0.0 12 0.5711003419999736 0.0 0.0 0.0 0.0 13 0.6313281365769778 0.0 0.0 0.0 0.0 14 0.6961775524187218 0.0 0.0 0.0 0.0 15 0.7594130687711916 0.0 0.0 0.0 0.0 16 0.8293976193515352 0.0 0.0 0.0 0.0 17 0.9016563010304015 0.0 0.0 0.0 0.0 18 0.9608570686596858 0.0 0.0 0.0 0.0 19 1.0254130482306527 0.0 0.0 0.0 0.0 20 1.0934169039832506 0.0 0.0 0.0 0.0 21 1.1644284815113142 0.0 0.0 0.0 0.0 22 1.2171002921158076 0.0 0.0 0.0 0.0 23 1.2646369679817013 0.0 0.0 0.0 0.0 24 1.3169419832477234 0.0 0.0 0.0 0.0 25 1.3689535622429683 0.0 0.0 0.0 0.0 26 1.4258068397060355 0.0 0.0 0.0 0.0 27 1.4742238243842607 0.0 0.0 0.0 0.0 28 1.5230076044009573 0.0 0.0 0.0 0.0 29 1.5758261331408392 0.0 0.0 0.0 0.0 30 1.6279110712037783 0.0 0.0 0.0 0.0 31 1.6808029590113545 0.0 0.0 0.0 0.0 32 1.7305404069080768 0.0 0.0 0.0 0.0 33 1.7837990900541243 0.0 0.0 0.0 0.0 34 1.840945803787969 0.0 0.0 0.0 0.0 35 1.899633057943393 0.0 0.0 0.0 0.0 36 1.9561928991356834 0.0 0.0 0.0 0.0 37 2.015246948629579 0.0 0.0 0.0 0.0 38 2.0682855545725443 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTT 130 0.0 72.78591 44 CGTATAA 85 0.0 72.78591 44 CATTGCG 135 0.0 72.78591 44 GTAGCAA 70 0.0 72.78591 44 TGCCTTA 15 0.0019055825 72.78591 44 TGTACTC 205 0.0 72.78591 44 CTACTGT 45 3.6379788E-12 72.785904 44 TGTCGCA 55 0.0 72.785904 44 ATAAGCA 145 0.0 70.27605 44 GACGGTT 115 0.0 69.62131 44 TGCAACA 115 0.0 69.62131 44 TTCGTCT 90 0.0 68.74224 44 AACACGA 90 0.0 68.74224 44 GACGTCC 70 0.0 67.586914 44 GTCAATC 65 0.0 67.187 44 CGGACAT 105 0.0 65.85392 44 GGGCTTA 50 9.094947E-12 65.50732 44 GTCCGAT 95 0.0 65.12424 44 AATGGTC 135 0.0 64.698586 44 CGTGCGC 85 0.0 64.22286 44 >>END_MODULE