##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840895.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1550345 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.5581718907727 39.0 37.0 39.0 31.0 39.0 2 37.14018492658086 39.0 37.0 39.0 33.0 39.0 3 37.36490974589527 39.0 37.0 39.0 33.0 39.0 4 37.61575262280331 39.0 37.0 39.0 33.0 41.0 5 38.31511437776753 40.0 37.0 41.0 34.0 41.0 6 38.33024004334519 40.0 38.0 41.0 34.0 41.0 7 38.26215584273178 40.0 37.0 41.0 34.0 41.0 8 38.23564754941642 40.0 37.0 41.0 33.0 41.0 9 38.02469127839287 40.0 37.0 41.0 33.0 41.0 10 37.929998161699494 39.0 37.0 41.0 33.0 41.0 11 37.92481673433978 39.0 37.0 41.0 33.0 41.0 12 38.00084110310931 39.0 37.0 41.0 33.0 41.0 13 38.08820617346461 40.0 37.0 41.0 33.0 41.0 14 38.07050043699951 40.0 37.0 41.0 33.0 41.0 15 38.03567270510757 40.0 37.0 41.0 33.0 41.0 16 38.06067294698922 40.0 37.0 41.0 33.0 41.0 17 38.03607842125462 40.0 37.0 41.0 33.0 41.0 18 37.99037504555438 40.0 36.0 41.0 33.0 41.0 19 37.99066981865327 40.0 36.0 41.0 33.0 41.0 20 37.93945799160832 40.0 36.0 41.0 33.0 41.0 21 37.84192292683242 40.0 36.0 41.0 33.0 41.0 22 37.729673072767675 39.0 36.0 41.0 33.0 41.0 23 37.60677010600866 39.0 35.0 41.0 33.0 41.0 24 37.4621887386356 39.0 35.0 41.0 32.0 41.0 25 37.22740119797898 39.0 35.0 41.0 32.0 41.0 26 37.16775341776376 39.0 35.0 41.0 32.0 41.0 27 37.09539522646791 39.0 35.0 41.0 32.0 41.0 28 37.03584109372301 39.0 35.0 40.0 32.0 41.0 29 36.98437227680665 38.0 35.0 40.0 32.0 41.0 30 36.83640319544532 38.0 35.0 40.0 31.0 41.0 31 36.668353725676255 38.0 35.0 40.0 31.0 41.0 32 36.53890511044841 38.0 35.0 40.0 31.0 41.0 33 36.47234404752013 38.0 35.0 40.0 31.0 41.0 34 36.50341244420849 37.0 35.0 40.0 31.0 41.0 35 36.35816615856151 37.0 35.0 40.0 31.0 41.0 36 36.261536806086106 37.0 34.0 40.0 31.0 41.0 37 36.12782933585216 37.0 34.0 40.0 31.0 41.0 38 36.08969676682349 37.0 34.0 40.0 31.0 41.0 39 36.017109108846164 36.0 34.0 40.0 31.0 41.0 40 35.90563276051275 36.0 34.0 40.0 31.0 41.0 41 35.776250801205585 36.0 34.0 40.0 30.0 41.0 42 35.58501534075957 36.0 34.0 39.0 30.0 41.0 43 35.51975795523142 35.0 34.0 39.0 30.0 41.0 44 35.433268754708855 35.0 34.0 39.0 30.0 41.0 45 35.26574407246304 35.0 34.0 39.0 30.0 41.0 46 35.16892554682632 35.0 34.0 39.0 30.0 41.0 47 35.0611773366281 35.0 33.0 39.0 30.0 40.0 48 35.03351395944299 35.0 33.0 39.0 30.0 40.0 49 35.207177436542814 35.0 33.0 39.0 30.0 40.0 50 35.314417769827806 36.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 50.0 14 297.0 15 1806.0 16 290.0 17 2.0 18 0.0 19 3.0 20 7.0 21 28.0 22 58.0 23 137.0 24 301.0 25 735.0 26 1456.0 27 3229.0 28 6515.0 29 12703.0 30 22801.0 31 38828.0 32 60020.0 33 90858.0 34 127007.0 35 138501.0 36 181573.0 37 216913.0 38 231412.0 39 236619.0 40 178196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 49.56774137369424 13.053417142635995 37.37884148366976 2 27.749952429943015 22.96733952765352 31.032060605865148 18.25064743653832 3 29.952945957190174 17.16185752203542 24.593364702695204 28.2918318180792 4 20.973783254694922 21.734323650542297 30.137550029187054 27.154343065575727 5 19.94820507693449 26.180946821513924 27.935975540927988 25.9348725606236 6 25.83605584563436 27.67074425369837 25.69924758682745 20.79395231383982 7 29.228784560855807 27.021146906011246 21.341249850839652 22.408818682293298 8 30.896542382501956 24.177070265005533 21.415491390625956 23.510895961866552 9 25.47271736290955 26.110704391603157 24.856918943847983 23.559659301639314 10 28.009636564764616 21.992459742831436 24.39379621955113 25.604107472852817 11 29.214529669202662 24.043745101896675 24.554147625206003 22.18757760369466 12 28.71077082842851 22.201574488259066 26.47597792749356 22.611676755818866 13 26.133602520729255 21.323705368805008 26.791391593484033 25.751300516981708 14 23.47032434716144 26.488491271297683 25.87533742489575 24.165846956645133 15 21.87990415036653 27.507812777156055 23.418722929412485 27.193560143064932 16 22.141910348986837 32.22044125662353 22.886389803559855 22.751258590829785 17 26.52080665916296 29.135708503591136 19.29847872570299 25.045006111542918 18 23.0767345332813 26.283375635745593 20.975460300771765 29.664429530201343 19 24.8376974157365 23.32300229948818 24.113729524718693 27.725570760056634 20 28.715672963114663 21.032350863839984 23.884748233457714 26.36722793958764 21 27.191431584582787 24.52763739683748 22.219570482699012 26.061360535880723 22 26.072325837152377 24.63006621106915 23.130206502423654 26.16740144935482 23 26.840606445662097 24.70508177212169 23.065317719604348 25.388994062611868 24 28.410515078901792 25.089383330807014 22.030515788421287 24.469585801869904 25 27.240807835162673 24.098684201961397 23.912842537757427 24.747665425118505 26 26.80213990871948 24.119895855848515 24.20806230253705 24.86990193289495 27 27.49309188047051 24.521723943803597 23.534707966978626 24.45047620874726 28 25.248787164656783 25.45156562985059 24.92754338558659 24.37210381990604 29 29.073796310689147 23.84553424889827 23.08891127444944 23.991758165963137 30 27.10254543676609 25.189732961382482 23.218723940578407 24.488997661273018 31 25.185560493475045 26.808674893079036 25.40015659344803 22.605608019997888 32 24.88691601521022 25.377920831872007 26.05929550700847 23.675867645909296 33 27.11438947429426 25.12905412906879 25.029972398161927 22.72658399847502 34 27.116345583115002 23.451409371494876 24.858070062658292 24.57417498273183 35 24.82469838882448 25.820319136005622 25.046326538300512 24.308655936869386 36 26.098658890455127 25.84048005911069 24.108623058188876 23.95223799224531 37 25.256494578917177 24.204801613286435 26.80792098141591 23.730782826380477 38 24.525789327893666 25.842316409410472 24.50020866512062 25.131685597575242 39 24.0432896535898 26.495543603619424 24.769801430444577 24.6913653123462 40 25.25301933176392 27.875605467034152 22.32600593517762 24.54536926602431 41 25.132269367383852 26.601377960891398 23.501529523063823 24.764823148660923 42 25.263272381004537 26.471594876171096 23.235888706858393 25.02924403596598 43 25.337165683170515 28.410616830719576 23.9924297488081 22.25978773730181 44 24.96587784032857 29.108892975748702 22.580602390657 23.34462679326573 45 24.124752366932157 23.616683433179304 27.24736670622454 25.011197493664 46 23.94267885051412 26.047930978617007 25.689976053049225 24.319414117819644 47 23.79548652767954 27.59365739143466 24.2600578202697 24.350798260616095 48 25.249287993099014 25.61068284200293 22.337248230252076 26.80278093464598 49 23.35681156184348 26.398392384122765 23.970933005856025 26.27386304817773 50 23.537456429984747 29.7014267074239 25.606917295075437 21.15419956751591 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11807.0 1 8814.5 2 5082.5 3 3663.5 4 2937.5 5 2805.0 6 2378.0 7 2164.5 8 2588.5 9 2978.5 10 3119.0 11 3015.5 12 2968.0 13 3115.0 14 3019.5 15 3132.0 16 3521.0 17 4071.5 18 4779.0 19 5491.0 20 5671.0 21 5362.5 22 6555.5 23 8340.0 24 8345.0 25 10308.0 26 12350.5 27 12585.0 28 12956.0 29 17053.0 30 22284.0 31 22826.5 32 24005.5 33 30713.0 34 39320.5 35 45642.5 36 50457.5 37 51979.0 38 54105.5 39 67013.0 40 78276.0 41 78004.0 42 82996.0 43 89844.0 44 89360.0 45 85190.0 46 83920.5 47 84600.5 48 87880.5 49 104014.5 50 118716.5 51 113822.0 52 106485.5 53 105224.0 54 102603.0 55 98884.5 56 96456.0 57 95819.5 58 95815.5 59 93583.5 60 85446.0 61 80792.0 62 82668.5 63 81904.5 64 73799.5 65 67642.5 66 65406.5 67 58136.0 68 48804.0 69 43036.5 70 38684.0 71 33192.0 72 28594.5 73 25397.0 74 22525.5 75 20040.5 76 15937.0 77 12366.0 78 11024.0 79 10049.0 80 8815.0 81 6141.0 82 3710.5 83 3097.5 84 2886.0 85 2171.0 86 1660.0 87 1359.0 88 880.0 89 560.5 90 426.0 91 319.5 92 230.5 93 178.0 94 89.5 95 3.0 96 3.0 97 3.0 98 2.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 14091.0 25 14133.0 26 10494.0 27 12454.0 28 13096.0 29 13481.0 30 14042.0 31 12947.0 32 13456.0 33 11908.0 34 13382.0 35 12866.0 36 13459.0 37 12315.0 38 12978.0 39 12065.0 40 12371.0 41 16009.0 42 16030.0 43 16610.0 44 20715.0 45 20784.0 46 26206.0 47 45925.0 48 183218.0 49 332338.0 50 652972.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.46409348438656 #Duplication Level Percentage of deduplicated Percentage of total 1 68.52173039419635 7.1701779255680265 2 13.385848518223753 2.801415405250613 3 5.473464697493912 1.7182453883419768 4 2.9333628254532074 1.2277993131666662 5 1.7523588950576083 0.9168423648039575 6 1.1143209777006193 0.6996215329363387 7 0.771703382324255 0.5652623434400814 8 0.6098018770827642 0.5104819078998757 9 0.43888758379790166 0.4133304635398004 >10 3.165571844152298 6.621957814877802 >50 0.48241985564271256 3.5976803216254014 >100 0.7103832612465486 17.995944725838065 >500 0.545879938824321 42.43429221674362 >1k 0.09303371417886283 12.675532366971792 >5k 0.0012322346248856005 0.6514159089959869 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 5069 0.32695948321180124 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 5035 0.32476642295747077 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT 3801 0.2451712360797113 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 3463 0.2233696370807788 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 3411 0.22001554492709685 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3022 0.19492435554666865 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 2688 0.17338076363648092 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 2641 0.17034918034372995 No Hit CTTTTCCAAGTCTTTTGCCAACCAGTTTGTTAGACTTTCCCCTATTCT 2329 0.1502246274216384 No Hit CATTTTCCGGCAAGCCAAGGGCTGTCTGTGCCTCAGGAGTGGGGTCAG 2299 0.1482895742560527 No Hit ATCAAACACAGCAACTTCACATCACTTCACAAGAATTCACAACACTCAA 2281 0.14712854235670125 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 2171 0.14003334741622026 No Hit TCCCAGATACCCGGTGTCAGCTGGTGAAAGAAGGACGCGATGAAGTTG 2153 0.13887231551686885 No Hit CAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGAT 2130 0.13738877475658642 No Hit CTCTTTTCCGTGGCGCCTCGGAGGCGTTCAGCTGCTTCAAGATGAAGCT 2067 0.13332516310885642 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 2019 0.13022907804391926 No Hit CTCTTTTCCTCCTTGGCTGTCTGAAGATAGATCGCCATCATGAACGACA 1867 0.12042480867161826 No Hit CCAGAGGGATTGGGCTGAGCAGACCCTCTCCTTGGTCTTCATTTTTTA 1849 0.11926377677226682 No Hit ATCTCATTTTGCAAAGGGCCCTGCCAAACGGAAACCTCAGGAAGAGTCTG 1721 0.11100754993243439 No Hit AGTCTCCCAGCTCCAGCTCGGCCTTTGGGTTTGCTGTGGTGTCCTTGTC 1717 0.11074954284368962 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 1715 0.11062053929931726 No Hit ACAACCACGTTAGCAAGCATGCGACTATCTTCAGCACTTCACTCATTGTT 1693 0.10920150031122106 No Hit CTCTTTCCGGTGTGGAGTCTGGAGACGACGTGCAGAAATGGCACCTCGA 1665 0.10739545069000771 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 1655 0.1067504329681458 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.08404580915860663 0.0 0.0 0.0 0.0 2 0.10836297727280057 0.0 0.0 0.0 0.0 3 0.14229090944273695 0.0 0.0 0.0 0.0 4 0.2295618072106531 0.0 0.0 0.0 0.0 5 0.26787585988925045 0.0 0.0 0.0 0.0 6 0.32321838042500217 0.0 0.0 0.0 0.0 7 0.43158135769780276 0.0 0.0 0.0 0.0 8 0.494212578490594 0.0 0.0 0.0 0.0 9 0.5621974463748391 0.0 0.0 0.0 0.0 10 0.6134763552628608 0.0 0.0 0.0 0.0 11 0.6821062408689679 0.0 0.0 0.0 0.0 12 0.7316436019079624 0.0 0.0 0.0 0.0 13 0.7866636135827831 0.0 0.0 0.0 0.0 14 0.8531649407067459 0.0 0.0 0.0 0.0 15 0.9244393989724867 0.0 0.0 0.0 0.0 16 0.988747665842119 0.0 0.0 0.0 0.0 17 1.1145261216051912 0.0 0.0 0.0 0.0 18 1.1920572517729924 0.0 0.0 0.0 0.0 19 1.28997094195163 0.0 0.0 0.0 0.0 20 1.3544082123656347 0.0 0.0 0.0 0.0 21 1.422457582022066 0.0 0.0 0.0 0.0 22 1.4810251911671273 0.0 0.0 0.0 0.0 23 1.5389477825903266 0.0 0.0 0.0 0.0 24 1.6029980423712142 0.0 0.0 0.0 0.0 25 1.6615011497440892 0.0 0.0 0.0 0.0 26 1.735742689530395 0.0 0.0 0.0 0.0 27 1.7910852100661465 0.0 0.0 0.0 0.0 28 1.8504268404774422 0.0 0.0 0.0 0.0 29 1.9213142881100658 0.0 0.0 0.0 0.0 30 1.9813654380154095 0.0 0.0 0.0 0.0 31 2.044770680074435 0.0 0.0 0.0 0.0 32 2.1019192502314 0.0 0.0 0.0 0.0 33 2.1570682654505933 0.0 0.0 0.0 0.0 34 2.2106692381373176 0.0 0.0 0.0 0.0 35 2.27226843057513 0.0 0.0 0.0 0.0 36 2.3342546336460592 0.0 0.0 0.0 0.0 37 2.3863075638003153 0.0 0.0 0.0 0.0 38 2.441585582563881 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATG 80 0.0 95.36844 44 ACCGACT 15 6.515637E-4 95.36844 44 TGCGATA 20 1.710091E-5 95.36844 44 TATTCGC 30 1.1985321E-8 95.36844 44 CTCGATA 45 0.0 95.36844 44 GTAAGTC 135 0.0 95.36844 44 ATAGCAC 120 0.0 91.39475 44 TACTGGA 105 0.0 90.82709 44 GAACGAT 85 0.0 89.75853 44 GCTTCGA 80 0.0 89.40791 44 TTTGACG 55 0.0 86.698586 44 CTTGCTA 40 9.222276E-10 83.44739 44 CGATATG 40 9.222276E-10 83.44739 44 TCGACAT 115 0.0 82.92908 44 GGGCCCA 70 0.0 81.74438 44 CATGGTT 160 0.0 80.467125 44 TCCGATC 105 0.0 77.203026 44 GGGGTAT 50 6.366463E-11 76.294754 44 TAATGTC 25 5.173449E-5 76.294754 44 GTGCGAA 70 0.0 74.93234 44 >>END_MODULE