ERR840892.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840892.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9499449
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA	80655	0.8490492448562016	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC	26775	0.281858453053435	No Hit
CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT	25494	0.26837346039754517	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20182	0.21245442761995986	No Hit
CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA	19754	0.20794890314164535	No Hit
CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA	18944	0.19942209279717169	No Hit
CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG	14664	0.15436684801402692	No Hit
CCATCTCATCCCTGAGCCATGATCAAACTCTACGTACTGAGTCGGAGACA	14007	0.14745065740128718	No Hit
AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG	12138	0.12777583205089055	No Hit
CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA	10960	0.11537511280917451	No Hit
CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA	10297	0.10839576063832757	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AATGCGC	30	1.0014455E-5	56.610306	44
TAAGCCA	10520	0.0	55.727795	44
CGTTCGA	200	0.0	50.156254	43
CGATACG	50	7.2759576E-12	49.339664	41
CCGGTAT	100	0.0	47.552658	44
CGGTCTA	65	0.0	47.07718	37
TACGGAA	100	0.0	46.87268	41
TTAAGCC	10350	0.0	45.473957	43
ATTAAGC	10285	0.0	42.872334	42
GTCCGTT	120	0.0	41.864994	33
ATCCGTT	150	0.0	41.718227	19
CACGATA	160	0.0	41.718224	19
CTAGACG	145	0.0	41.452095	5
ATTCGCG	105	0.0	41.452095	3
CGAATGT	110	0.0	41.45209	11
CGATACT	30	3.8126636E-6	41.45209	4
TCGCGTA	130	0.0	41.329193	24
CGAACAC	170	0.0	40.874817	35
ACGATAT	75	0.0	40.69749	26
CGACTAG	70	0.0	40.351868	37