ERR840891.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840891.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6492440
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA	49414	0.7611006031630635	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC	46112	0.7102414500557571	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT	20929	0.322359544331561	No Hit
CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA	17391	0.26786539421234545	No Hit
CTTTTCCAAGTCTTTTGCCAACCAGTTTGTTAGACTTTCCCCTATTCT	12054	0.1856620931421777	No Hit
CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT	11928	0.18372137439853123	No Hit
TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA	10539	0.16232726062928576	No Hit
AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG	9683	0.14914269519625903	No Hit
CCATCTCATCCCTGAGCCATGATCAAACTCTACGTACTGAGTCGGAGACA	9597	0.14781807764107177	No Hit
CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG	9282	0.1429662807819556	No Hit
ATCAACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGG	7218	0.1111754594574613	No Hit
CCATCTCATCCCTGAGCCAGGATCAAACTCTACGTACTGAGTCGGAGACA	7008	0.10794092821805053	No Hit
ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC	6851	0.10552273105334821	No Hit
ATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGG	6749	0.10395167302277726	No Hit
AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT	6641	0.10228819981393743	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTTAT	120	0.0	62.998493	44
ATATCGA	125	0.0	57.72953	44
TAAGCCA	6310	0.0	56.036983	44
TATCGTA	80	0.0	55.839573	44
TGTACGG	95	0.0	47.0228	44
TAACGCT	125	0.0	45.544495	38
TCGATTG	60	0.0	44.959003	31
TATCGCG	95	0.0	44.432304	29
TCCCGTT	210	0.0	44.39233	36
CTCGTAC	200	0.0	44.28135	36
CGCGTTA	55	2.7284841E-11	44.0806	40
CGTAAGT	80	0.0	44.046364	37
GATGCGC	70	0.0	43.626873	37
TCTAGCG	25	4.880679E-5	43.308598	25
TCATGCG	160	0.0	43.306038	30
TAACGTC	680	0.0	43.208714	35
GACGCAT	60	0.0	43.036926	24
CATACGC	345	0.0	42.99057	42
CGCGTCA	50	6.4574124E-10	42.697964	38
GCGCGTC	50	7.0940587E-10	42.28451	37