##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840890.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5857675 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.94511696193456 39.0 37.0 39.0 32.0 39.0 2 37.42567674034493 39.0 37.0 39.0 35.0 39.0 3 37.44520650257995 39.0 37.0 39.0 34.0 39.0 4 37.61238443580431 39.0 37.0 39.0 34.0 40.0 5 38.32908688174062 40.0 38.0 41.0 34.0 41.0 6 38.3038729530061 40.0 38.0 41.0 34.0 41.0 7 38.28656403777949 40.0 38.0 41.0 34.0 41.0 8 38.19543743891561 40.0 38.0 41.0 33.0 41.0 9 38.05274328125067 39.0 37.0 40.0 33.0 41.0 10 38.01202524892555 39.0 37.0 40.0 33.0 41.0 11 37.879382519515 39.0 37.0 40.0 33.0 41.0 12 38.06204099749474 39.0 37.0 41.0 33.0 41.0 13 38.25930970905692 40.0 38.0 41.0 34.0 41.0 14 38.24528469059823 40.0 37.0 41.0 34.0 41.0 15 38.27118455701281 40.0 38.0 41.0 34.0 41.0 16 38.28169111464873 40.0 38.0 41.0 34.0 41.0 17 38.267183481500766 40.0 37.0 41.0 34.0 41.0 18 38.275923638645025 40.0 37.0 41.0 34.0 41.0 19 38.25058815997815 40.0 37.0 41.0 33.0 41.0 20 38.18313921479085 40.0 37.0 41.0 33.0 41.0 21 38.13331944841597 40.0 37.0 41.0 33.0 41.0 22 37.97243377278528 40.0 37.0 41.0 33.0 41.0 23 37.91113624432902 40.0 37.0 41.0 33.0 41.0 24 37.72561536787207 39.0 36.0 41.0 32.0 41.0 25 37.63992154898584 39.0 36.0 41.0 32.0 41.0 26 37.5585974743946 39.0 36.0 41.0 32.0 41.0 27 37.49082360996465 39.0 35.0 41.0 32.0 41.0 28 37.43511704754433 39.0 35.0 41.0 32.0 41.0 29 37.38530834812546 39.0 35.0 41.0 32.0 41.0 30 37.34480832894052 39.0 35.0 41.0 32.0 41.0 31 37.17381672313541 39.0 35.0 41.0 31.0 41.0 32 37.08465008359478 39.0 35.0 41.0 31.0 41.0 33 37.05027922975449 39.0 35.0 40.0 31.0 41.0 34 36.991440270585905 38.0 35.0 40.0 31.0 41.0 35 36.933413430520254 38.0 35.0 40.0 31.0 41.0 36 36.8645957375593 38.0 35.0 40.0 31.0 41.0 37 36.78203058412546 38.0 35.0 40.0 31.0 41.0 38 36.71389423323511 38.0 35.0 40.0 31.0 41.0 39 36.568040947826276 38.0 35.0 40.0 31.0 41.0 40 36.539632965458566 38.0 34.0 40.0 31.0 41.0 41 36.42076908319334 38.0 34.0 40.0 31.0 41.0 42 36.26826719392743 37.0 34.0 40.0 30.0 41.0 43 36.195923374047396 37.0 34.0 40.0 30.0 41.0 44 36.109350809627365 37.0 34.0 40.0 30.0 41.0 45 35.9853357844714 37.0 34.0 40.0 30.0 41.0 46 35.849137344372494 37.0 34.0 40.0 30.0 41.0 47 35.7383600396254 36.0 34.0 40.0 30.0 41.0 48 35.60267753846853 36.0 34.0 40.0 29.0 41.0 49 35.77520074734701 36.0 34.0 40.0 30.0 41.0 50 35.84109642264564 37.0 34.0 39.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 4.0 14 102.0 15 1100.0 16 743.0 17 8.0 18 1.0 19 0.0 20 4.0 21 31.0 22 68.0 23 161.0 24 430.0 25 1233.0 26 2997.0 27 7241.0 28 16688.0 29 36006.0 30 69952.0 31 123779.0 32 199497.0 33 299210.0 34 415061.0 35 510559.0 36 648838.0 37 770936.0 38 857505.0 39 1064513.0 40 831008.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 52.104734386936805 14.9276803509925 32.967585262070706 2 26.00545438249818 22.968293734288775 31.824930539847294 19.201321343365755 3 25.392275945661037 16.95706914432774 29.461552578454764 28.189102331556466 4 21.80308740242502 18.974268801188185 33.086813454143496 26.135830342243295 5 19.07898611650527 25.30809578885821 30.050950249032255 25.561967845604272 6 22.142658990128336 26.698220710435454 27.940966339033828 23.218153960402375 7 27.717652481573317 26.625188321304954 23.591988288868876 22.06517090825285 8 26.969625320626356 23.092609269035925 24.42192508119689 25.515840329140826 9 25.5435817111738 21.989355845109195 27.383304809502064 25.083757634214944 10 27.52547725846859 20.94267776891002 26.38485405899098 25.146990913630408 11 27.002385758854835 22.34878172653826 27.087504854741855 23.56132765986505 12 26.726423026200667 21.86756691007951 26.369165240475102 25.03684482324472 13 24.69394426969745 21.8805584126808 27.794321125702602 25.631176191919145 14 21.434237986914603 24.699851050118006 27.479520458202273 26.386390504765117 15 22.23201184770408 24.948311403415175 27.518443751146997 25.30123299773374 16 24.301587233842778 29.002104077129577 22.828289381025748 23.868019308001895 17 23.989279022820487 28.645699872389642 23.149235831622615 24.215785273167256 18 23.672344402856083 23.544819403602965 24.44556927449884 28.337266919042108 19 24.766174292701457 23.670944530039648 24.510356071308156 27.052525105950743 20 25.447109988177903 22.016841152846478 25.869444788247897 26.666604070727722 21 25.29756259949553 23.56238610028723 24.88927774244901 26.250773557768227 22 25.41452026614655 24.135497445658903 26.09644611556633 24.353536172628218 23 26.547341735415504 24.85066173865911 25.604305462491517 22.99769106343387 24 26.168112775119823 23.65964311778991 25.698455445206502 24.47378866188377 25 24.890090266859094 26.69857719326781 24.87552915277896 23.535803387094138 26 25.541028852905335 25.276983240262247 26.46629049494799 22.71569741188443 27 25.73428167832515 24.75535017677872 25.896469443709602 23.61389870118653 28 24.886568449781738 25.122453913696862 25.670421520592484 24.320556115928913 29 26.209968203217983 25.369699551767887 24.855606863357696 23.564725381656434 30 26.102722764523783 24.811479231794316 25.00717317741778 24.07862482626412 31 23.585425424383217 26.942513950888824 26.04230383799472 23.429756786733243 32 25.577483433548448 24.56788053525501 27.037387707749566 22.817248323446975 33 25.352112156992963 24.39112029664119 26.260458792904153 23.996308753461694 34 24.923677419186927 26.14941193223752 26.514135525702798 22.412775122872755 35 23.712193277537878 24.446684231532135 25.877161723797492 25.963960767132495 36 24.511627678034916 25.614400835419293 27.424520146955643 22.449451339590144 37 23.620981581492057 26.01768085033195 27.200512920474395 23.160824647701602 38 23.140447104855493 25.52322852758666 27.300919407516073 24.035404960041774 39 24.36820273556326 25.652307761763765 26.757305940338195 23.222183562334784 40 24.80016600400522 25.341406593397963 26.311654458815358 23.546772943781455 41 24.42665396131792 26.3100805367957 26.788493203246205 22.474772298640175 42 24.140411195352314 27.13218908942453 26.376659905801503 22.35073980942165 43 24.61288865905797 25.649697213947498 26.833913170849343 22.903500956145184 44 24.514546630757746 27.090886488599626 25.66781274254267 22.72675413809996 45 23.978050633639324 26.646507593680628 26.441841564000956 22.93360020867909 46 23.781965150679785 26.20550432780096 26.069713320542064 23.942817200977192 47 24.323236346429457 26.332314613397063 25.754614452376334 23.58983458779715 48 23.156226343265924 26.374720921480815 25.645624197253614 24.823428537999646 49 22.649513354883865 27.584293928613345 24.244491950861743 25.521700765641043 50 22.707458208998002 29.76210418371799 26.008891634793297 21.521545972490706 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9655.0 1 7735.0 2 7069.5 3 8194.0 4 7987.0 5 7141.0 6 5711.0 7 5638.5 8 6822.0 9 8376.5 10 9567.0 11 11246.5 12 12955.5 13 14020.0 14 16018.0 15 18857.0 16 21565.0 17 26517.5 18 30192.0 19 30929.0 20 31401.0 21 40823.0 22 50782.0 23 57034.0 24 62892.0 25 76636.5 26 93652.5 27 103268.5 28 109660.5 29 129889.0 30 156124.5 31 170838.0 32 181511.5 33 188321.0 34 198592.5 35 211628.5 36 218495.0 37 217227.0 38 226899.5 39 264793.5 40 296308.0 41 298472.5 42 298429.0 43 295798.0 44 290875.0 45 293480.5 46 303465.5 47 302607.0 48 301876.0 49 314600.0 50 339657.5 51 354959.0 52 365962.0 53 388295.5 54 379254.0 55 346123.5 56 337308.5 57 331233.5 58 320620.5 59 314629.0 60 292354.5 61 268580.0 62 255379.0 63 243073.0 64 236328.5 65 224433.0 66 203305.5 67 194702.0 68 193947.0 69 185340.5 70 161173.5 71 136564.0 72 118349.0 73 106634.0 74 99130.5 75 85861.0 76 71010.5 77 55950.0 78 42306.0 79 35005.0 80 27126.5 81 18714.5 82 12578.0 83 9897.5 84 8140.0 85 6205.5 86 4459.0 87 3103.5 88 2193.0 89 1713.0 90 1180.5 91 609.0 92 401.0 93 277.0 94 267.5 95 222.5 96 171.5 97 169.5 98 225.0 99 281.0 100 281.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 47680.0 25 47733.0 26 42965.0 27 44509.0 28 46231.0 29 41772.0 30 54521.0 31 57042.0 32 48329.0 33 47751.0 34 47286.0 35 49718.0 36 49358.0 37 46614.0 38 47334.0 39 44979.0 40 48209.0 41 48749.0 42 54131.0 43 51872.0 44 56675.0 45 65860.0 46 68341.0 47 118868.0 48 372126.0 49 1068992.0 50 3140030.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.639130503893146 #Duplication Level Percentage of deduplicated Percentage of total 1 68.66184208009835 6.618404564477699 2 13.17399259323325 2.5397166772699395 3 5.434204415237213 1.5714301662991148 4 2.7436595934578993 1.057859715183964 5 1.6728072933739884 0.8062203904348069 6 1.0973252110680227 0.6346356548818057 7 0.8202515989744615 0.5534558545979301 8 0.5947667893625089 0.4586427761637399 9 0.4843919290369073 0.4202205317117367 >10 3.347361983528397 6.5688441075595865 >50 0.5145091998785704 3.521341738417437 >100 0.7460611015774562 17.796748002504916 >500 0.6020945005363082 42.32052773352386 >1k 0.10478146343255539 13.313161999301728 >5k 0.0012410664027544633 0.775736377009335 >10k+ 7.091808015739791E-4 1.043053710662402 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 23662 0.4039486656395242 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 13157 0.22461130055866874 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 12537 0.21402689633685718 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG 11678 0.1993623750037344 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA 8313 0.1419163746708378 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 7252 0.12380338615577 No Hit CTTTTCCAAGTCTTTTGCCAACCAGTTTGTTAGACTTTCCCCTATTCT 7112 0.12141335939600609 No Hit CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 6045 0.10319794116266266 No Hit AGCCATTGTGGCTCCGGCCGGTTGCGCGGG 5980 0.10208828588134371 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.03528703794594271 0.0 0.0 0.0 0.0 2 0.06630617096373562 0.0 0.0 0.0 0.0 3 0.09092344658930378 0.0 0.0 0.0 0.0 4 0.11985984200215956 0.0 0.0 0.0 0.0 5 0.15362750579368095 0.0 0.0 0.0 0.0 6 0.20634466746618751 0.0 0.0 0.0 0.0 7 0.25755952660398534 0.0 0.0 0.0 0.0 8 0.31707119292210645 0.0 0.0 0.0 0.0 9 0.3702834315662784 0.0 0.0 0.0 0.0 10 0.4286171561242302 0.0 0.0 0.0 0.0 11 0.4852095754714968 0.0 0.0 0.0 0.0 12 0.5439188756631257 0.0 0.0 0.0 0.0 13 0.6034134703615343 0.0 0.0 0.0 0.0 14 0.6664248187207382 0.0 0.0 0.0 0.0 15 0.7344552232754463 0.0 0.0 0.0 0.0 16 0.7969714946629849 0.0 0.0 0.0 0.0 17 0.8679382178082601 0.0 0.0 0.0 0.0 18 0.9282181070134482 0.0 0.0 0.0 0.0 19 0.9998506233275147 0.0 0.0 0.0 0.0 20 1.0655422159815968 0.0 0.0 0.0 0.0 21 1.1315410977905056 0.0 0.0 0.0 0.0 22 1.1897723926301818 0.0 0.0 0.0 0.0 23 1.245152726977854 0.0 0.0 0.0 0.0 24 1.3003623451283999 0.0 0.0 0.0 0.0 25 1.3545135228567649 0.0 0.0 0.0 0.0 26 1.4133935392455197 0.0 0.0 0.0 0.0 27 1.4634133850034357 0.0 0.0 0.0 0.0 28 1.5157378994225525 0.0 0.0 0.0 0.0 29 1.5778785951764138 0.0 0.0 0.0 0.0 30 1.6313639797359873 0.0 0.0 0.0 0.0 31 1.687529608590439 0.0 0.0 0.0 0.0 32 1.7425002240650087 0.0 0.0 0.0 0.0 33 1.7975903408775666 0.0 0.0 0.0 0.0 34 1.854746123675349 0.0 0.0 0.0 0.0 35 1.9120555510505448 0.0 0.0 0.0 0.0 36 1.9717550051855044 0.0 0.0 0.0 0.0 37 2.0281937799553575 0.0 0.0 0.0 0.0 38 2.0858104964853803 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCATACG 60 0.0 69.79501 44 TATACCG 55 0.0 69.2182 44 TTACCCG 95 0.0 64.117905 44 ACTAGCC 115 0.0 62.89827 44 CGTTAGC 110 0.0 56.806293 43 AACCGAC 135 0.0 56.40001 44 ACATACG 70 3.6379788E-12 54.385727 44 CGAACCG 95 0.0 53.816486 43 ACGGATA 25 1.8969451E-5 50.819714 41 TAAGCCA 3735 0.0 50.55616 44 CGCACTA 40 2.6338967E-9 50.111378 40 ATATCGT 180 0.0 48.84711 38 TTACGTT 100 0.0 48.84711 38 CCCGTTA 55 0.0 47.791477 36 ACGATAC 45 2.3283064E-10 47.35257 35 CGGTAAC 140 0.0 47.35257 35 AACGATA 45 2.564775E-10 46.905514 34 TAAGGCG 90 0.0 46.905514 34 CGTTATA 75 0.0 46.90551 34 CGTCGTT 140 0.0 45.230316 34 >>END_MODULE