ERR840886.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840886.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9038221
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA	29172	0.322762632159581	No Hit
CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA	25405	0.28108407616941433	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	22331	0.24707295827353634	No Hit
CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT	21996	0.2433664766550851	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC	21651	0.23954935379429204	No Hit
CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA	15532	0.1718479776053274	No Hit
CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA	14346	0.15872592626358661	No Hit
AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG	13940	0.1542338918245084	No Hit
CCATCTCATCCCTGAGCCATGATCAAACTCTACGTACTGAGTCGGAGACA	11735	0.12983749788813528	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT	11698	0.12942812529147052	No Hit
CCATCTCATCCCTGAGCCAGGATCAAACTCTACGTACTGAGTCGGAGACA	10717	0.11857421941773719	No Hit
ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC	10365	0.11467964768730482	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGGTA	75	0.0	71.51009	44
CGATCGT	85	0.0	54.870956	43
CGTACGG	30	8.9647983E-7	51.149807	42
CGTTATA	35	5.3722033E-8	49.907883	41
GGTACGT	65	0.0	47.21521	42
TTCGTAC	115	0.0	46.702	42
CGCTAGT	55	1.8189894E-12	44.70286	30
AACGACA	1320	0.0	44.06304	43
TAATCCG	70	0.0	43.908817	37
TAAGCCA	5335	0.0	43.76391	44
AATGCGC	145	0.0	43.625942	36
GCGTACG	35	3.0703359E-6	42.778187	41
CGGTATA	50	4.7293724E-11	41.873985	20
GCGTTAG	150	0.0	41.799946	35
TCGTACA	125	0.0	41.701927	43
GCGACTA	30	6.197747E-5	41.5899	41
CGGGTAT	105	0.0	41.266136	10
ATTCGCG	295	0.0	41.266136	11
CTAAGCG	150	0.0	41.266136	6
TCTAGCG	45	9.0221874E-10	41.266136	4