##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840885.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4183065 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.02127172300693 38.0 35.0 39.0 30.0 39.0 2 36.855075405235155 39.0 37.0 39.0 32.0 39.0 3 36.724112582520235 38.0 35.0 39.0 33.0 39.0 4 36.91754156342299 38.0 35.0 39.0 33.0 39.0 5 37.72175163426817 39.0 36.0 40.0 33.0 41.0 6 37.67335076074601 39.0 36.0 40.0 33.0 41.0 7 37.78551875239806 39.0 36.0 40.0 33.0 41.0 8 37.55332322113092 39.0 36.0 40.0 33.0 41.0 9 37.53672008443569 39.0 36.0 40.0 33.0 41.0 10 37.49714790470624 39.0 36.0 40.0 33.0 41.0 11 37.24285039797373 38.0 36.0 40.0 32.0 41.0 12 37.53389058023244 39.0 36.0 40.0 33.0 41.0 13 37.65670913552622 39.0 36.0 40.0 33.0 41.0 14 37.636474212090896 39.0 36.0 40.0 33.0 41.0 15 37.51886427774849 39.0 35.0 40.0 33.0 41.0 16 37.59118827940756 39.0 35.0 40.0 33.0 41.0 17 37.621315948951306 39.0 35.0 40.0 33.0 41.0 18 37.65175320010567 39.0 35.0 41.0 33.0 41.0 19 37.55308679162289 39.0 35.0 41.0 33.0 41.0 20 37.532248721929975 39.0 35.0 41.0 33.0 41.0 21 37.337502046944046 39.0 35.0 40.0 33.0 41.0 22 37.28209434947819 39.0 35.0 40.0 32.0 41.0 23 37.235088625206636 39.0 35.0 40.0 32.0 41.0 24 37.045168554636376 39.0 35.0 40.0 32.0 41.0 25 36.89782515865531 38.0 35.0 40.0 31.0 41.0 26 36.847660688973804 38.0 35.0 40.0 31.0 41.0 27 36.770623040991076 38.0 35.0 40.0 31.0 41.0 28 36.727171751495376 38.0 35.0 40.0 31.0 41.0 29 36.677312831719306 38.0 35.0 40.0 31.0 41.0 30 36.675937498621586 38.0 35.0 40.0 31.0 41.0 31 36.58822622706052 38.0 35.0 40.0 31.0 41.0 32 36.41916525500109 38.0 35.0 40.0 31.0 41.0 33 36.40674888841412 37.0 35.0 40.0 31.0 41.0 34 36.323214124853614 37.0 34.0 40.0 31.0 41.0 35 36.23858876159486 37.0 34.0 40.0 31.0 41.0 36 36.20492474801953 37.0 34.0 40.0 31.0 41.0 37 36.13688358830698 37.0 34.0 40.0 31.0 41.0 38 36.02860438292964 37.0 34.0 40.0 31.0 41.0 39 35.88325643087751 36.0 34.0 40.0 30.0 41.0 40 35.791063422205966 36.0 34.0 40.0 30.0 41.0 41 35.709844203398795 36.0 34.0 40.0 30.0 41.0 42 35.60790897812498 36.0 34.0 39.0 30.0 41.0 43 35.59338443700269 36.0 34.0 39.0 30.0 41.0 44 35.475136745262205 35.0 34.0 39.0 30.0 41.0 45 35.26350369423528 35.0 34.0 39.0 29.0 41.0 46 35.17257335277781 35.0 33.0 39.0 29.0 41.0 47 35.0066577170948 35.0 33.0 39.0 29.0 40.0 48 34.92716303312628 35.0 33.0 39.0 29.0 40.0 49 34.98464441141154 35.0 33.0 39.0 29.0 40.0 50 34.960452335886714 35.0 33.0 38.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 120.0 14 880.0 15 4496.0 16 524.0 17 11.0 18 1.0 19 8.0 20 20.0 21 65.0 22 190.0 23 474.0 24 1088.0 25 2541.0 26 5321.0 27 10910.0 28 21532.0 29 40360.0 30 71135.0 31 118868.0 32 186400.0 33 281468.0 34 386209.0 35 414613.0 36 564496.0 37 569030.0 38 559545.0 39 600076.0 40 342684.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 60.41878383434156 15.081835926527559 24.49938023913088 2 27.84766672284557 30.998227376337685 24.618694665275342 16.535411235541403 3 23.064021238015666 25.18963965417702 28.33807268115604 23.408266426651274 4 23.17587701840636 27.691656715829183 27.07165678754693 22.06080947821753 5 19.12580846819258 29.734154262484562 25.66520003872758 25.47483723059527 6 18.625385931129447 36.61941662393484 24.59600795110762 20.159189493828087 7 28.797400948825803 31.611175059436082 20.157277020557892 19.434146971180226 8 22.213353127431677 29.84259149690478 26.00442498502892 21.93963039063462 9 25.015102562355594 31.197459279260542 24.89954136500389 18.887896793379973 10 23.242000781723448 28.497907634712828 22.50118035459645 25.758911228967275 11 20.921764304403588 32.51620522272544 26.84514823460788 19.716882238263093 12 23.736733710807744 27.667822517699342 27.499668305417202 21.09577546607571 13 20.68980520264447 31.295497440274055 25.680428107141534 22.334269249939936 14 21.57666686986695 29.533177227702655 24.617810146387875 24.27234575604252 15 20.64110885200206 30.277559636295397 29.445562046011712 19.635769465690828 16 21.495554097294686 35.64321854907825 19.606675966067943 23.254551387559122 17 25.098892797506135 35.184774800295955 19.81649818972452 19.899834212473387 18 23.783302434937063 30.70408898738126 21.742239243234327 23.77036933444735 19 23.59322649779528 30.93179283611419 22.44538394693843 23.029596719152103 20 24.78151785831681 30.731485166976846 22.655230076510886 21.83176689819546 21 21.939463049223477 33.30598496556951 22.718987154156103 22.035564831050916 22 21.086380441135866 34.51442901317574 22.54903999818315 21.850150547505237 23 24.342509619142902 32.62411652699635 22.954245272306313 20.079128581554436 24 22.254758173731464 32.636308544093865 23.776823931734267 21.332109350440405 25 21.208709435657696 35.516566577131556 21.862042988471465 21.41268099873928 26 21.65459771679653 35.036476656436086 23.525438246000544 19.783487380766847 27 20.951514179463558 33.576999541214256 24.18755758134122 21.28392869798097 28 22.60157359385497 31.33716628485989 22.716885041978564 23.34437507930658 29 21.63024901156224 31.981196898030905 25.49667653483059 20.89187755557626 30 22.4315196005043 31.37632298830921 24.767809729949644 21.424347681236846 31 22.07197732698182 31.765517129099706 24.34460970945272 21.81789583446575 32 21.095128605587675 31.607902353890953 25.898083453261854 21.398885587259517 33 21.613164629440547 29.937024206797997 25.87832507389798 22.57148608986348 34 21.26426940407663 32.03572007283385 24.612099713441935 22.08791080964759 35 21.38289533171464 30.341412891842033 25.377173239533075 22.898518536910252 36 20.542539062101987 31.36506621673088 26.595550449380433 21.496844271786696 37 20.41273888323598 33.43509494755948 24.225089984978883 21.927076184225662 38 20.94932605932025 32.12430929148531 24.845525443610963 22.080839205583477 39 21.453985098773142 31.290762152142413 26.353735044133042 20.9015177049514 40 20.512996146954535 32.573166020288966 24.87902629494312 22.034811537813383 41 22.722919202267565 31.185918669718866 24.561981591682493 21.529180536331076 42 20.449251438558207 32.91978181683578 24.95295877205429 21.67800797255172 43 21.682382675624133 30.10333638940294 25.594915049095864 22.619365885877063 44 21.43675940644851 31.51496892036611 25.442384532170912 21.60588714101447 45 20.931083006763323 31.037962976893795 26.7324279337798 21.29852608256308 46 21.93491685362074 31.726955579211747 23.423350496227894 22.914777070939618 47 22.090664577371598 31.21594743639354 24.136230956282457 22.5571570299524 48 21.599033065971355 29.50154917880742 24.95583840822943 23.9435793469918 49 21.066836482853137 29.565165429346894 24.177485258946113 25.190512828853855 50 20.473513536865582 32.4562564070717 25.50804309692308 21.562186959139645 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 194741.0 1 184925.0 2 104640.5 3 32790.5 4 30815.5 5 25899.5 6 17454.5 7 13356.0 8 12721.5 9 11053.5 10 9374.0 11 9274.0 12 10235.5 13 12149.5 14 14259.5 15 15854.5 16 17188.0 17 19472.0 18 22473.0 19 27942.0 20 33382.0 21 44736.0 22 57099.0 23 68779.0 24 82737.5 25 96721.5 26 105881.5 27 105572.0 28 103976.0 29 109580.0 30 115339.0 31 127157.5 32 146985.5 33 154766.5 34 155686.5 35 172783.0 36 194331.0 37 202692.0 38 212097.5 39 214394.5 40 213915.5 41 230758.0 42 252023.5 43 263182.5 44 264240.0 45 252542.0 46 247974.5 47 238915.5 48 228952.0 49 244939.5 50 272413.5 51 271016.0 52 244353.0 53 221513.0 54 211712.5 55 211888.5 56 207368.0 57 196704.5 58 184900.0 59 172015.5 60 160486.5 61 142095.0 62 120028.5 63 109175.0 64 101925.5 65 92199.5 66 79609.5 67 70731.5 68 70405.0 69 71822.0 70 59689.5 71 44112.5 72 36342.5 73 29263.0 74 23004.5 75 19834.0 76 16727.0 77 11853.0 78 7846.0 79 7698.5 80 8053.5 81 5924.0 82 4062.0 83 3466.5 84 2659.5 85 2182.0 86 1744.0 87 1162.5 88 670.5 89 548.0 90 471.5 91 455.5 92 452.5 93 343.5 94 162.0 95 1.5 96 0.5 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 52097.0 25 53977.0 26 55506.0 27 57438.0 28 57883.0 29 52105.0 30 45832.0 31 41400.0 32 36346.0 33 33848.0 34 31540.0 35 33760.0 36 32399.0 37 35564.0 38 35741.0 39 38441.0 40 41616.0 41 43643.0 42 41222.0 43 46870.0 44 59006.0 45 57293.0 46 59723.0 47 88521.0 48 223138.0 49 606002.0 50 2222154.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.341561380042869 #Duplication Level Percentage of deduplicated Percentage of total 1 70.16212228950393 7.957480165004826 2 13.072988439119253 2.965362016057237 3 5.141388986066986 1.7493413629246533 4 2.614891126254719 1.186277928421893 5 1.5708068836917772 0.8907701343792075 6 1.031293930778155 0.7017890050071677 7 0.7458636603064972 0.5921480939156707 8 0.5236689899133956 0.4751379193542262 9 0.42521771391412005 0.43403695220146515 >10 3.011492984772345 6.9810059648567835 >50 0.5084458124015195 4.0623185620201845 >100 0.6744876427013508 18.716529047479398 >500 0.45211284290271203 36.41849898211331 >1k 0.06164218844601892 10.677617878509636 >5k 0.0012622973743212063 0.9789092936364773 >10k+ 0.0023142118529222116 5.212776694117884 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 25479 0.6090988306421249 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 24768 0.5921017244532418 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 24279 0.5804117315891577 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 22927 0.5480909333228148 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 21699 0.5187344686252784 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 19951 0.4769469276714562 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 19816 0.47371962902799747 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 17133 0.4095800567287384 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 16811 0.4018823518161922 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 13105 0.3132870275742787 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12499 0.2988000425525303 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 9874 0.23604701337416467 No Hit CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT 7503 0.17936608682867705 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7129 0.1704252742905023 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG 6204 0.14831230210384014 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG 5258 0.12569730568375104 No Hit AGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5058 0.12091612250825651 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 4909 0.11735414104251309 No Hit CATTTTCCGGCAAGCCAAGGGCTGTCTGTGCCTCAGGAGTGGGGTCAGC 4658 0.11135375615726746 No Hit CATTTTCCGGCAAGCCAAGGGCTGTCTGTGCCTCAGGAGTGGGGTCAG 4641 0.11094735558735043 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAAT 4627 0.11061267276506581 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA 4400 0.10518602986087952 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.12177673547984552 0.0 0.0 0.0 0.0 2 0.2277755664805591 0.0 0.0 0.0 0.0 3 0.33547171750857324 0.0 0.0 0.0 0.0 4 0.4557662862040155 0.0 0.0 0.0 0.0 5 0.5942532568822143 0.0 0.0 0.0 0.0 6 0.7866002560323591 0.0 0.0 0.0 0.0 7 0.9441163357490261 0.0 0.0 0.0 0.0 8 1.1178406264306195 0.0 0.0 0.0 0.0 9 1.291254140205806 0.0 0.0 0.0 0.0 10 1.4770987302372782 0.0 0.0 0.0 0.0 11 1.6750636196186288 0.0 0.0 0.0 0.0 12 1.8502461711687483 0.0 0.0 0.0 0.0 13 2.0444817376732134 0.0 0.0 0.0 0.0 14 2.1880845743491912 0.0 0.0 0.0 0.0 15 2.3351537688274027 0.0 0.0 0.0 0.0 16 2.460803262679399 0.0 0.0 0.0 0.0 17 2.6416037044607243 0.0 0.0 0.0 0.0 18 2.7607746951099252 0.0 0.0 0.0 0.0 19 2.9025128703474605 0.0 0.0 0.0 0.0 20 3.031867781160465 0.0 0.0 0.0 0.0 21 3.1678685365874064 0.0 0.0 0.0 0.0 22 3.309702335488452 0.0 0.0 0.0 0.0 23 3.4297817509409967 0.0 0.0 0.0 0.0 24 3.543358757274869 0.0 0.0 0.0 0.0 25 3.660521650990362 0.0 0.0 0.0 0.0 26 3.7854061555342793 0.0 0.0 0.0 0.0 27 3.894966968000736 0.0 0.0 0.0 0.0 28 4.004360439056051 9.562366350989048E-5 0.0 0.0 0.0 29 4.127499811740912 9.562366350989048E-5 0.0 0.0 0.0 30 4.243180538672003 9.562366350989048E-5 0.0 0.0 0.0 31 4.3563750503518355 9.562366350989048E-5 0.0 0.0 0.0 32 4.456038813645018 9.562366350989048E-5 0.0 0.0 0.0 33 4.550825770099197 9.562366350989048E-5 0.0 0.0 0.0 34 4.641381379443064 9.562366350989048E-5 0.0 0.0 0.0 35 4.727107993779681 9.562366350989048E-5 0.0 0.0 0.0 36 4.810109333706266 9.562366350989048E-5 0.0 0.0 0.0 37 4.885006568150387 9.562366350989048E-5 0.0 0.0 0.0 38 4.957154622268599 9.562366350989048E-5 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTTA 45 1.8189894E-12 75.08259 44 TCGACAT 85 0.0 75.08259 44 GCAATTA 120 0.0 65.697266 44 GTCGTAC 95 0.0 63.227444 44 TTGGCGT 105 0.0 60.781147 44 TAAGCCA 3450 0.0 57.23687 44 TGGCGTA 100 0.0 56.311943 44 TCTCGTG 75 0.0 55.091652 43 GCGTAGA 75 0.0 55.060566 44 CGCCTAC 85 0.0 53.218433 41 ACGAACG 70 0.0 53.218433 41 TAGACGA 50 7.4578566E-11 53.12409 43 CGTTCGA 45 1.7516868E-9 52.46824 43 ATCGACC 85 0.0 52.22299 40 CGTAATC 85 0.0 52.08244 43 TCGATCC 90 0.0 51.66955 42 ACATACG 40 4.0996383E-8 51.648426 43 TTGCGAC 35 4.9503797E-8 50.427288 38 TTATACG 30 9.887335E-7 50.427284 38 CGAATTA 45 1.2551027E-10 50.427284 38 >>END_MODULE