##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840879.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2840906 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 34.91815920695722 37.0 34.0 39.0 26.0 39.0 2 35.74963268760036 37.0 35.0 39.0 31.0 39.0 3 36.071225869493745 37.0 35.0 39.0 32.0 39.0 4 36.184645320894106 37.0 35.0 39.0 32.0 39.0 5 37.00972999458624 38.0 35.0 40.0 33.0 41.0 6 37.03299686790059 38.0 35.0 40.0 33.0 41.0 7 37.03609376727002 38.0 35.0 40.0 33.0 41.0 8 36.96811862131306 38.0 35.0 40.0 33.0 41.0 9 36.88406832186634 38.0 35.0 40.0 33.0 41.0 10 36.81486047056819 38.0 35.0 40.0 32.0 41.0 11 36.73360012615694 38.0 35.0 40.0 32.0 41.0 12 36.821998686334574 38.0 35.0 40.0 33.0 41.0 13 36.936469562878884 38.0 35.0 40.0 33.0 41.0 14 36.97965472986434 38.0 35.0 40.0 33.0 41.0 15 37.00828573701488 38.0 35.0 40.0 33.0 41.0 16 37.00747120812868 38.0 35.0 41.0 33.0 41.0 17 37.011149260130395 38.0 35.0 41.0 33.0 41.0 18 37.04679070690829 38.0 35.0 41.0 33.0 41.0 19 36.986664817491324 38.0 35.0 41.0 33.0 41.0 20 37.04261492636504 38.0 35.0 41.0 33.0 41.0 21 36.956955985168115 38.0 35.0 41.0 33.0 41.0 22 36.89100554541403 38.0 35.0 41.0 33.0 41.0 23 36.862908170844086 38.0 35.0 41.0 33.0 41.0 24 36.794252608146834 38.0 35.0 41.0 32.0 41.0 25 36.68766738163189 38.0 35.0 41.0 32.0 41.0 26 36.64679613722647 38.0 35.0 40.0 32.0 41.0 27 36.612643567833906 38.0 35.0 40.0 32.0 41.0 28 36.65663527665277 38.0 35.0 40.0 32.0 41.0 29 36.605400878755184 38.0 35.0 40.0 32.0 41.0 30 36.58677173603632 37.0 35.0 40.0 32.0 41.0 31 36.46085357631573 37.0 35.0 40.0 31.0 41.0 32 36.37491138074487 37.0 35.0 40.0 31.0 41.0 33 36.358457582002245 37.0 35.0 40.0 31.0 41.0 34 36.36201602732488 37.0 35.0 40.0 31.0 41.0 35 36.28615392355812 37.0 34.0 40.0 31.0 41.0 36 36.246382267845156 36.0 34.0 40.0 31.0 41.0 37 36.20234559978586 36.0 34.0 40.0 31.0 41.0 38 36.139840313885166 36.0 34.0 40.0 31.0 41.0 39 36.03435961161876 36.0 34.0 40.0 31.0 41.0 40 35.95612013168869 36.0 34.0 40.0 31.0 41.0 41 35.876697340399424 36.0 34.0 40.0 31.0 41.0 42 35.80692679708057 35.0 34.0 40.0 31.0 41.0 43 35.713828980342925 35.0 34.0 39.0 31.0 41.0 44 35.63323976131968 35.0 34.0 39.0 31.0 41.0 45 35.451590048390706 35.0 34.0 39.0 30.0 41.0 46 35.34016013273168 35.0 34.0 39.0 30.0 41.0 47 35.24216160657677 35.0 34.0 39.0 30.0 41.0 48 35.13706770986508 35.0 34.0 39.0 30.0 40.0 49 35.23175878012582 35.0 34.0 39.0 30.0 40.0 50 35.214671409768776 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 9.0 14 661.0 15 3367.0 16 304.0 17 2.0 18 0.0 19 1.0 20 16.0 21 65.0 22 246.0 23 663.0 24 1577.0 25 3520.0 26 7301.0 27 13834.0 28 24786.0 29 42752.0 30 70242.0 31 110698.0 32 164252.0 33 251755.0 34 440962.0 35 169731.0 36 191292.0 37 248953.0 38 310824.0 39 438436.0 40 344657.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 51.16649406914555 13.142180698692602 35.69132523216185 2 26.94168691255536 26.05911635231859 30.053792698526454 16.945404036599594 3 27.196781590098368 18.268714276361134 26.927325296929922 27.607178836610576 4 21.73602364879373 20.537286344567544 31.22077956820817 26.505910438430558 5 20.064268229923833 24.774526154684455 29.744384361890187 25.416821253501524 6 20.226505206437665 30.329338598320394 27.95847521882104 21.485680976420902 7 27.854881506111077 26.984454959086996 23.072674703070074 22.08798883173185 8 24.9589391553258 25.44308048207157 25.157854571745773 24.44012579085686 9 23.718208205410527 27.04725182740999 27.358490566037734 21.87604940114175 10 25.64840230546171 22.724194323923424 25.340190770127556 26.287212600487308 11 24.86833425674767 25.563253412819716 26.765017920339496 22.803394410093116 12 25.750588016639764 23.39039024874459 27.3978442088545 23.461177525761148 13 22.52489170708218 22.158072107982456 29.405971193696658 25.911064991238707 14 20.859331494952666 25.15876977274151 27.894129548812952 26.08776918349287 15 20.07250503888548 28.98504913573346 27.743121384516066 23.19932444086499 16 23.938384444962278 31.31522127096074 22.455266031329444 22.291128252747537 17 24.747703725501655 29.47816647224512 22.03620957539602 23.737920226857206 18 23.28950693898355 26.557196894230223 24.50239465860539 25.65090150818084 19 22.64256543511119 25.795045665009685 26.648329793382814 24.914059106496307 20 25.40045323569312 21.872247797005603 27.10494469017982 25.622354277121453 21 25.160388974503206 25.896668175574977 24.710532485059346 24.232410364862478 22 25.029902432533845 27.21754961269398 24.965767962755546 22.78677999201663 23 24.887201477275205 27.34546655186761 23.58715846282841 24.180173508028776 24 25.69254315348695 27.23036242663432 24.203159133037136 22.873935286841593 25 24.722918476237744 27.51713257582472 24.653891833442646 23.106057114494885 26 24.403985836354288 27.432052226034426 25.31364423351813 22.850317704093158 27 25.311653058077095 27.61369939738268 24.52324999937089 22.551397545169337 28 25.652822658424512 25.803843596882302 25.410096218396617 23.133237526296572 29 25.177133998685914 25.541878985127774 25.936870583493587 23.344116432692726 30 26.015013543295996 25.94850759627772 25.314078278196618 22.72240058222967 31 23.782516250261803 27.870410869080946 25.296974783323677 23.050098097333574 32 24.64116893505854 25.388460943196034 26.948309008489918 23.0220611132555 33 23.06000191609387 27.773968549761147 27.11081221716482 22.055217316980162 34 24.913966301133843 24.955412363720047 27.038237872390035 23.092383462756075 35 23.759485102081577 25.76330582393272 25.464135374914047 25.013073699071654 36 24.708150225639336 26.39767249349217 26.406153876855686 22.488023404012807 37 23.593086905713758 26.10142191204407 27.152334788163767 23.153156394078405 38 23.589438019917118 27.259381598217324 25.867973690138168 23.28320669172739 39 22.810721094291868 27.722552960185503 26.499023234221912 22.967702711300714 40 22.86731260150871 29.511796287081975 24.959060049614827 22.661831061794484 41 23.474523483741166 26.52266332755133 26.09485912708151 23.90795406162599 42 24.139582042471694 26.920802117951897 25.978104304302697 22.961511535273715 43 23.069942358946708 26.58216489336649 26.120216271700663 24.227676475986144 44 23.521693947011723 27.79858900558196 25.411089451049197 23.26862759635712 45 23.98760456270617 27.750475609518894 25.92488825193793 22.337031575837006 46 22.56379961202797 29.520565450378545 25.689865382923365 22.22576955467012 47 23.523837492053605 27.15974357646831 24.545517044118732 24.77090188735935 48 23.031821496128902 28.26407004000745 25.090795502599008 23.613312961264647 49 23.66612731272118 27.11686060610119 26.096041990211276 23.120970090966356 50 24.66048530134156 29.576370651930716 25.92979842232691 19.83334562440081 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20511.0 1 16321.0 2 10769.0 3 8258.0 4 6876.0 5 6327.0 6 5795.5 7 5320.5 8 5046.5 9 4786.5 10 4419.5 11 5299.0 12 6476.0 13 7857.0 14 9540.0 15 9197.5 16 8644.0 17 11461.5 18 13928.5 19 14372.0 20 14596.5 21 17692.5 22 21329.0 23 22112.0 24 22764.0 25 28628.5 26 35105.0 27 41544.5 28 48847.5 29 55181.0 30 61551.0 31 71420.5 32 80461.0 33 86922.5 34 93155.0 35 98760.5 36 107580.0 37 119169.5 38 129178.5 39 134589.0 40 138114.5 41 153036.0 42 178797.5 43 190035.5 44 191814.5 45 186639.0 46 181126.0 47 179870.0 48 179350.5 49 180422.0 50 180860.0 51 177595.0 52 176074.5 53 179891.0 54 179199.5 55 176953.5 56 176315.0 57 167551.5 58 150999.0 59 142324.0 60 145088.5 61 133380.0 62 110285.5 63 93403.0 64 79740.5 65 71505.0 66 63675.5 67 61086.0 68 63372.0 69 57758.5 70 46472.5 71 40479.5 72 36574.0 73 31456.0 74 27899.0 75 25289.0 76 23249.0 77 18197.5 78 12291.0 79 11443.0 80 11043.0 81 8249.5 82 5860.0 83 5448.0 84 4990.5 85 3961.5 86 3012.0 87 1880.5 88 858.0 89 625.5 90 620.0 91 503.5 92 253.5 93 70.5 94 45.5 95 37.0 96 24.5 97 24.0 98 192.5 99 361.0 100 361.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 20256.0 25 18829.0 26 20122.0 27 18506.0 28 19084.0 29 18037.0 30 23654.0 31 21003.0 32 19750.0 33 19677.0 34 18400.0 35 17881.0 36 20526.0 37 19147.0 38 19876.0 39 19897.0 40 20208.0 41 20633.0 42 22592.0 43 21571.0 44 24884.0 45 29603.0 46 30356.0 47 57842.0 48 207799.0 49 490695.0 50 1600078.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.96801806945982 #Duplication Level Percentage of deduplicated Percentage of total 1 68.47274896071322 6.825375989059755 2 13.72201783062531 2.735626433702459 3 5.60557752051369 1.6762949404271472 4 2.8854124417244678 1.150473734278147 5 1.6703308628067424 0.8324944111217012 6 1.0949701222702262 0.6548809178584946 7 0.7219353905569071 0.5037385512637648 8 0.5265807327311788 0.41991730071150263 9 0.4158788937661254 0.3730939494990929 >10 2.9862037286128738 5.960630529001829 >50 0.4860749756850541 3.437839594755282 >100 0.7087855876566596 17.831828607056195 >500 0.6172267511463759 44.64183678642912 >1k 0.08413514706348078 11.067959858422856 >5k 0.0017675451063756467 1.396898576878819 >10k+ 3.5350902127512934E-4 0.49110981953383026 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 13937 0.4905829337542319 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 9506 0.3346115640573817 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 9022 0.31757474552132314 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 8229 0.2896611151512933 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 6527 0.22975064996870717 No Hit CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT 6358 0.22380184349640575 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 4329 0.15238096579049076 No Hit CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG 4050 0.14256015510544875 No Hit ACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATG 3698 0.1301697416246789 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG 3517 0.12379853469280575 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 3495 0.12302413385025762 No Hit CATTTTCCGGCAAGCCAAGGGCTGTCTGTGCCTCAGGAGTGGGGTCAG 3424 0.12052493113112507 No Hit CTTTTCCGCGCCGATAGCGCTCACGCAAGCATGGTTAACGTCCCTAAAA 3231 0.11373132373968023 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 3017 0.1061985155439849 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.04076164434866905 0.0 0.0 0.0 0.0 2 0.07170247801229608 0.0 0.0 0.0 0.0 3 0.10299531205889952 0.0 0.0 0.0 0.0 4 0.13728014936080252 0.0 0.0 0.0 0.0 5 0.1813857973477475 0.0 0.0 0.0 0.0 6 0.24492186647499073 0.0 0.0 0.0 0.0 7 0.30011552652569284 0.0 0.0 0.0 0.0 8 0.3551683864232044 0.0 0.0 0.0 0.0 9 0.4151140516440882 0.0 0.0 0.0 0.0 10 0.4780517201202715 0.0 0.0 0.0 0.0 11 0.5529574016176529 0.0 0.0 0.0 0.0 12 0.6218438765661377 0.0 0.0 0.0 0.0 13 0.6913991522422777 0.0 0.0 0.0 0.0 14 0.7692264369183633 0.0 0.0 0.0 0.0 15 0.8529321279901553 0.0 0.0 0.0 0.0 16 0.9332234153470759 0.0 0.0 0.0 0.0 17 1.0136203028188895 0.0 0.0 0.0 0.0 18 1.0860267815971383 0.0 0.0 0.0 0.0 19 1.1669516696434166 0.0 0.0 0.0 0.0 20 1.2446733542046093 0.0 0.0 0.0 0.0 21 1.322113438459421 0.0 0.0 0.0 0.0 22 1.393147115744062 0.0 0.0 0.0 0.0 23 1.452564780390481 0.0 0.0 0.0 0.0 24 1.5156784490581525 0.0 0.0 0.0 0.0 25 1.5794609184534794 0.0 0.0 0.0 0.0 26 1.641659386125412 0.0 0.0 0.0 0.0 27 1.700126649737795 0.0 0.0 0.0 0.0 28 1.7595091143459165 0.0 0.0 0.0 0.0 29 1.8283251892178058 0.0 0.0 0.0 0.0 30 1.8937972604514193 0.0 0.0 0.0 0.0 31 1.9576501299233413 0.0 0.0 0.0 0.0 32 2.0177717953357135 0.0 0.0 0.0 0.0 33 2.0833846667225173 0.0 0.0 0.0 0.0 34 2.1513559406752636 0.0 0.0 0.0 0.0 35 2.2192568145514144 0.0 0.0 0.0 0.0 36 2.2883896897679823 0.0 0.0 0.0 0.0 37 2.352664959699476 0.0 0.0 0.0 0.0 38 2.4162010288267193 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTCGA 80 0.0 73.11981 44 TGCACTA 95 0.0 73.11981 44 CGGCTAT 65 0.0 73.119804 44 TTACGCG 85 0.0 68.81865 44 TAATCGT 85 0.0 68.81865 44 TCACTCG 105 0.0 66.15602 44 ATAGCGA 95 0.0 61.57458 44 CCCGTCA 125 0.0 61.420647 44 TACGCTT 90 0.0 60.933178 44 GCTAGTT 75 0.0 58.495853 44 CGATCTA 30 4.8627044E-7 55.88731 43 ATGTCGC 90 0.0 55.887306 43 GAGACAC 240 0.0 54.83986 44 ATGCACC 160 0.0 52.554867 44 CACGACG 80 0.0 52.394356 43 TAGCCGT 260 0.0 52.027554 44 AGAACGG 100 0.0 51.18387 44 CCGTACC 20 3.8312442E-4 50.902477 42 TGTCGTA 115 0.0 50.902477 42 AGGTCGA 210 0.0 50.56471 43 >>END_MODULE