Basic Statistics
Measure | Value |
---|---|
Filename | SRR7458455_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 102738055 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 864650 | 0.841606355113497 | No Hit |
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 501046 | 0.48769270549262395 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 315894 | 0.30747516098100164 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATGCCTA | 557755 | 0.0 | 143.83554 | 1 |
ACGTATC | 198165 | 0.0 | 140.69293 | 1 |
TGCCTAA | 571640 | 0.0 | 140.35374 | 2 |
AGAGTCA | 306310 | 0.0 | 138.15746 | 1 |
ACTTCGA | 178010 | 0.0 | 137.78734 | 2 |
CATCAAG | 254275 | 0.0 | 137.55919 | 1 |
CGCTCGA | 263325 | 0.0 | 137.16187 | 2 |
ACGCTCG | 264260 | 0.0 | 137.01416 | 1 |
ATCCTGT | 339680 | 0.0 | 136.7515 | 1 |
GCCTAAT | 248675 | 0.0 | 136.35716 | 3 |
GCTCGAT | 148090 | 0.0 | 136.12302 | 3 |
AGTCACT | 176025 | 0.0 | 135.97104 | 1 |
CAAGCTA | 330580 | 0.0 | 135.26704 | 2 |
GTCACTA | 177105 | 0.0 | 134.9855 | 2 |
GCTGATC | 238155 | 0.0 | 134.53906 | 2 |
TCCTGTA | 346195 | 0.0 | 134.14906 | 2 |
CAAGACT | 190520 | 0.0 | 133.98872 | 1 |
CGAACTT | 169810 | 0.0 | 133.82776 | 1 |
CACTTCG | 184690 | 0.0 | 133.7802 | 1 |
AACCGAG | 233285 | 0.0 | 133.45053 | 1 |