FastQCFastQC Report
Sun 19 Mar 2023
SRR7458453_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7458453_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences179834604
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG63047023.505833615870725No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA12092620.6724300958229374No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA12025330.6686883243004778No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG8455370.4701748057342735No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC5071660.2820180258522436No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCGTGGAGAACAAAAAGTTC5055360.2811116374465951No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA4594270.25547196689687157No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA3203390.17812978863622933No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC2876880.15997366113142497No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA2547570.1416618350047914No Hit
AAGCAGTGGTATCAACGCAGAGTACATAGGAAGCAGTGGTATCAACGCAG2252860.12527399899076155No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTTCTTGCTGCAGCAACG1939720.1078613324051916No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCTCTCTAAAAAAAAAAAAAA1847710.10274496447858278No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGCAGT78500350.0102.723981
GTATCAA80643250.099.9931269
AGTGGTA80705800.099.860225
AGCAGTG80857250.099.717472
GGTATCA81040600.099.451768
GTGGTAT81934800.098.3484656
TGGTATC82164200.098.078697
CAGTGGT82199000.098.0640644
GCAGTGG82995100.097.100193
GACTGGA1696100.029.490063
GTGACTG1909100.026.290831
TGACTGG1959850.025.576512
CGACCTA704600.024.70747245-49
TACGCAC713650.024.48176850-54
AACGCGA987150.024.23605245-49
CATGGGG23356850.024.02913725-29
AAACCGC1989350.023.9644685-89
GAAACCG2043350.023.45871285-89
GATAAGT2153000.022.4001995-99
TCGGAAC1074950.022.3968475-79