Basic Statistics
Measure | Value |
---|---|
Filename | SRR7458453_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 179834604 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 6304702 | 3.505833615870725 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1209262 | 0.6724300958229374 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 1202533 | 0.6686883243004778 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 845537 | 0.4701748057342735 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 507166 | 0.2820180258522436 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCGTGGAGAACAAAAAGTTC | 505536 | 0.2811116374465951 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 459427 | 0.25547196689687157 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 320339 | 0.17812978863622933 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAACGC | 287688 | 0.15997366113142497 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 254757 | 0.1416618350047914 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATAGGAAGCAGTGGTATCAACGCAG | 225286 | 0.12527399899076155 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTTTCTTGCTGCAGCAACG | 193972 | 0.1078613324051916 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGCTCTCTAAAAAAAAAAAAAA | 184771 | 0.10274496447858278 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 7850035 | 0.0 | 102.72398 | 1 |
GTATCAA | 8064325 | 0.0 | 99.993126 | 9 |
AGTGGTA | 8070580 | 0.0 | 99.86022 | 5 |
AGCAGTG | 8085725 | 0.0 | 99.71747 | 2 |
GGTATCA | 8104060 | 0.0 | 99.45176 | 8 |
GTGGTAT | 8193480 | 0.0 | 98.348465 | 6 |
TGGTATC | 8216420 | 0.0 | 98.07869 | 7 |
CAGTGGT | 8219900 | 0.0 | 98.064064 | 4 |
GCAGTGG | 8299510 | 0.0 | 97.10019 | 3 |
GACTGGA | 169610 | 0.0 | 29.49006 | 3 |
GTGACTG | 190910 | 0.0 | 26.29083 | 1 |
TGACTGG | 195985 | 0.0 | 25.57651 | 2 |
CGACCTA | 70460 | 0.0 | 24.707472 | 45-49 |
TACGCAC | 71365 | 0.0 | 24.481768 | 50-54 |
AACGCGA | 98715 | 0.0 | 24.236052 | 45-49 |
CATGGGG | 2335685 | 0.0 | 24.029137 | 25-29 |
AAACCGC | 198935 | 0.0 | 23.96446 | 85-89 |
GAAACCG | 204335 | 0.0 | 23.458712 | 85-89 |
GATAAGT | 215300 | 0.0 | 22.40019 | 95-99 |
TCGGAAC | 107495 | 0.0 | 22.39684 | 75-79 |