SRR7458449_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR7458449_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	192435579
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	10663473	5.541320921740776	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	822545	0.42743914835000446	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	502342	0.2610442427592873	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA	366075	0.19023249333741968	No Hit
AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA	300769	0.1562959415108991	No Hit
AGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTG	264702	0.13755356539343486	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	258097	0.13412124792162264	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGGACTATCTCGTATGC	218303	0.11344211976518127	TruSeq Adapter, Index 10 (97% over 36bp)

Adapter graph

$Kmer graph$

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	7135400	44.286003	1
AGCAGTG	7278530	43.30427	2
GTATCAA	7316450	43.003033	9
GGTATCA	7367475	42.604546	8
AGTGGTA	7334765	42.6004	5
CAGTGGT	7372185	42.383778	4
GTGGTAT	7407570	42.372692	6
TGGTATC	7411280	42.347553	7
GCAGTGG	7471665	42.163204	3
CATGGGG	600750	19.234253	25-29
TACGCAC	16190	15.733683	50-54
ATGGGGG	239040	15.604819	25-29
GGATCAA	189875	15.046029	9
GTGGGAT	206415	14.03579	6
CGACCTA	18970	13.4660635	45-49
CGACGCA	108230	13.397397	130-134
GGGATCA	214650	13.292638	8
TCGACGC	121760	13.118585	130-134
ATGGGGC	188025	13.055801	25-29
ATCGACG	70270	12.43533	130-134