Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896146_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 456068 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 9256 | 2.029521913398879 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 5393 | 1.1824991010112527 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 2228 | 0.4885236412113983 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 2038 | 0.446863187068595 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1321 | 0.2896497890665427 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCAGGCATGGTGGCTCAAG | 849 | 0.1861564503538946 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCAGGCATGGTGGCTCAA | 845 | 0.18527938816141454 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGACGCAGTGGCTCA | 775 | 0.16993079979301332 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGGCCGGGCCCGGTGGCTC | 604 | 0.13243639106449037 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTGCCCCTCATTTACATAAAT | 583 | 0.12783181455397002 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 557 | 0.12213091030284957 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 536 | 0.11752633379232921 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 479 | 0.10502819754948822 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 14675 | 0.0 | 102.22262 | 1 |
GGTATCA | 15000 | 0.0 | 100.39448 | 8 |
GTATCAA | 15015 | 0.0 | 100.13834 | 9 |
AGCAGTG | 15035 | 0.0 | 99.63031 | 2 |
GTGGTAT | 14990 | 0.0 | 99.49408 | 6 |
TGGTATC | 15060 | 0.0 | 99.12792 | 7 |
CAGTGGT | 15070 | 0.0 | 99.01403 | 4 |
AGTGGTA | 15235 | 0.0 | 98.03685 | 5 |
GCAGTGG | 15620 | 0.0 | 95.574036 | 3 |
GCGCGTT | 25 | 9.385255E-4 | 86.99579 | 145 |
AAATATA | 1335 | 0.0 | 49.96013 | 145 |
CGCTGTT | 160 | 0.0 | 49.84134 | 145 |
ATTCACG | 70 | 0.0010562876 | 41.426567 | 145 |
AGGGGTA | 270 | 0.0 | 40.280247 | 5 |
AGCGGTA | 80 | 0.0020348434 | 36.25222 | 5 |
GGGGTAT | 310 | 0.0 | 35.082794 | 6 |
TTCGATA | 90 | 0.0036270379 | 32.22066 | 145 |
GCGGTAT | 95 | 0.004723212 | 30.528185 | 6 |
CGGTATC | 100 | 0.006069223 | 29.001776 | 7 |
CCGCAAG | 350 | 0.0 | 28.998596 | 145 |