SRR4896142_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896142_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	698710
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	68896	9.860457128136137	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	12723	1.820927137152753	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	10255	1.4677047702194044	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	7068	1.011578480342345	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2839	0.40632021868872636	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	1489	0.2131070114926078	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGATTAGGAGATCGGAAGAGCAC	1055	0.1509925434014112	No Hit
AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA	779	0.11149117659687137	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAATATA	2640	0.0	65.35717	145
AAGCAGT	45660	0.0	63.537598	1
AGCAGTG	47315	0.0	61.383015	2
AGTGGTA	47825	0.0	60.572468	5
CAGTGGT	47975	0.0	60.432743	4
GCAGTGG	48530	0.0	59.771507	3
GTATCAA	48975	0.0	59.61113	9
GGTATCA	49350	0.0	59.15194	8
TGGTATC	49345	0.0	58.746502	7
GTGGTAT	49325	0.0	58.69682	6
TAATCCG	80	3.7280843E-5	45.32362	3
CACGGGC	170	1.8280844E-9	38.38078	145
ATATGCG	105	1.8535921E-4	34.522396	145
AAAATAT	4220	0.0	32.469048	145
CCCGGGT	260	1.10958354E-10	30.67182	145
GTCGATA	25	5.156381E-4	29.000057	55-59
CGATAGG	20	0.006077718	28.998814	35-39
CGCTGTT	200	3.2531352E-7	28.99881	145
CTAATCC	435	0.0	28.340286	2
CCCGGCT	615	0.0	27.11271	145