SRR4896137_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896137_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	317568
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	20783	6.544425130995567	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	5451	1.7164827690447402	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	3994	1.2576833937928256	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	2758	0.8684754131398629	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1438	0.452816404675534	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGACACAGGATCCGGAGCTGGT	581	0.18295294236195084	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGATTGAGGAGGTAGATTAGGG	511	0.16091041918581217	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	495	0.15587212817412333	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGATTGCTGTTTTTGTTTT	404	0.1272168480451431	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	343	0.1080083635630794	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACGGA	20	3.8645352E-4	108.74339	145
AAGCAGT	24890	0.0	92.8113	1
AGCAGTG	25725	0.0	89.64377	2
GGTATCA	25960	0.0	88.93001	8
GTATCAA	26040	0.0	88.726364	9
GTGGTAT	25935	0.0	88.596375	6
AGTGGTA	26010	0.0	88.39667	5
TGGTATC	26010	0.0	88.36879	7
CAGTGGT	26120	0.0	88.03827	4
GCAGTGG	26395	0.0	87.17597	3
CAGCGAT	35	0.003565122	62.13908	145
AAATATA	1285	0.0	56.4168	145
CATCGGA	55	3.2166182E-4	52.724064	145
GAGGTAT	160	1.0040822E-9	40.785194	6
AGAGGTA	185	4.1600288E-9	35.273678	5
GGGTATC	220	6.184564E-10	32.95773	7
AGGTATC	205	1.1323209E-8	31.832344	7
AGGGGTA	260	1.09139364E-10	30.67604	5
AGAGAGT	260	1.10958354E-10	30.67121	145
GCAAAGC	100	0.006070103	28.998236	145