Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896136_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 626399 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CATCAAGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGC | 16307 | 2.603292789420162 | No Hit |
CATCAAGTTGATACCACTGCTTCGCATGTACTCTGCGTTGATACCACTGC | 744 | 0.11877413597403573 | No Hit |
CATCAAGTTGGTACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGC | 738 | 0.11781628003876123 | No Hit |
CATCAAGTTGATACCACTGCGTCCCATGTACTCTGCGTTGATACCACTGC | 672 | 0.10727986475074194 | No Hit |
CATCAAGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATACCACTGC | 650 | 0.10376772632140216 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGTCGTA | 50 | 0.0 | 144.89694 | 6 |
ATCAAGT | 62690 | 0.0 | 144.76982 | 2 |
CATCAAG | 62700 | 0.0 | 144.74673 | 1 |
TCAAGTG | 22405 | 0.0 | 144.47658 | 3 |
TCAAGTT | 21595 | 0.0 | 143.99112 | 3 |
CAAGTTG | 11085 | 0.0 | 143.7205 | 4 |
TCAAGTA | 16540 | 0.0 | 143.36388 | 3 |
CAAGTGG | 8325 | 0.0 | 143.15643 | 4 |
CAAGTAG | 6570 | 0.0 | 142.80177 | 4 |
CAAGTGA | 6135 | 0.0 | 142.65323 | 4 |
CAAGTGT | 7910 | 0.0 | 142.60718 | 4 |
TCAAGTC | 2515 | 0.0 | 142.30435 | 3 |
CAAGTAT | 5480 | 0.0 | 141.45961 | 4 |
CAAGTTA | 5025 | 0.0 | 139.99496 | 4 |
AAGTTGA | 5165 | 0.0 | 138.86542 | 5 |
AAGTTAG | 1995 | 0.0 | 138.36024 | 5 |
CAAGTTT | 5630 | 0.0 | 138.3341 | 4 |
CAAGTAA | 4610 | 0.0 | 138.13927 | 4 |
AGTTGAT | 3825 | 0.0 | 137.13123 | 6 |
CAAGTCG | 930 | 0.0 | 137.10678 | 4 |