FastQCFastQC Report
Sun 19 Mar 2023
SRR4896128_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4896128_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107956
Sequences flagged as poor quality0
Sequence length151
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG1200111.116566008373782No Hit
ACACGACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC18271.6923561450961504No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT15241.4116862425432584No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG15131.4014969061469489No Hit
ACACGACCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGC7010.6493386194375487No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCGCACGTACGCTGCG5810.5381822223868984No Hit
ACACGACCATCTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG4590.42517321871873726No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG4440.41127866908740596No Hit
ACACGACCATGTACCCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG4090.37885805328096633No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACGCTGCG3760.3482900440920375No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGT3130.2899329356404461No Hit
ACACGACCATGTACTCTGCGTGGATACCACTGCTTCCCATGTACTCTGCG3040.2815962058616473No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCGAACGGACGCGCGG2860.26492274630404977No Hit
ACACGACCCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGC2510.23250213049761012No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCGCACGTACTCTGCG2370.21953388417503428No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCGCACGGACGCGGCG2370.21953388417503428No Hit
ACACGACCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG2300.21304976101374634No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTAGAACGGAAGAGCGG2140.19822890807365967No Hit
ACACGACCCATGTACTCTGCGTTGATACCACTGCTTCGCACGTACTCTGC2040.18896587498610545No Hit
ACACGACCCATGTACTCTGCGTTGATACCACTGCTCCCCACGTACTCTGC1930.17877653858979586No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCGCACGTACGCGGCG1820.16858720219348622No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCCTCCCATGTACTCTGCG1810.16766089888473082No Hit
ACACGACCTATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC1560.14450331616584533No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTACCCATGTACTCTGCG1520.14079810293082365No Hit
ACACGACCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCG1470.13616658638704657No Hit
ACACGACCATGTACTCTGCGTTGATACCACAGCTTCCCATGTACTCTGCG1420.1315350698432695No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACGCTGCG1330.12319834006447071No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCCAAGGACCCCGCGG1300.12041943013820446No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCGCATGTACTCTGCG1280.11856682352069361No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTTCGCACGGACGCTGCG1200.11115639705065028No Hit
ACACGACCCATGTACTCTGCGTTGATACCACTGCTTCGCACGGACGCGGG1130.10467227388936233No Hit
ACACGACCATGTACTCTGCGTTGATACCACTGCTCCCCACGTACTCTGCG1100.10189336396309606No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCTAG100.007090084144.945799
ATTGTCG100.007090084144.945799
TGAGTGG151.2288192E-4144.945799
GTGAGTG202.1258656E-6144.945799
ATCGGGA100.007090084144.945799
TAGTAGT100.007090084144.945799
CAGGTTA100.0070999153144.878658
CAGGTGT100.0070999153144.878658
CGGAATG100.0070999153144.878658
CGGAATA151.2310906E-4144.878658
TCTGACC100.0070999153144.87865145
CTGTCAG100.0070999153144.878658
CTGTAAG100.0070999153144.878658
CGAGTAT100.0070999153144.878658
CCTAGCG100.0070999153144.878657
CATTGTA100.0070999153144.878658
CTGAGTG351.0913936E-11144.878658
CGTGAAT100.0070999153144.878658
CGGTTAT100.0070999153144.878658
ACCTGCT151.2310906E-4144.878656