SRR4896127_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896127_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	624695
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	33626	5.38278679995838	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4304	0.6889762203955531	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	4244	0.6793715333082545	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	2117	0.338885376063519	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAA	1549	0.24796100497042556	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	1121	0.1794475704143622	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	999	0.15991804000352172	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	748	0.11973843235498922	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	30970	0.0	76.08224	1
GTATCAA	31865	0.0	74.03038	9
GTGGTAT	31715	0.0	73.94621	6
GGTATCA	31930	0.0	73.87968	8
AGTGGTA	31830	0.0	73.684944	5
TGGTATC	31900	0.0	73.56283	7
CAGTGGT	32005	0.0	73.304695	4
AGCAGTG	32170	0.0	73.17662	2
GCAGTGG	32485	0.0	72.310814	3
GTTGCGT	45	0.009637181	48.333683	4
TGTTGCG	140	6.60395E-7	36.25026	3
TTCGATA	135	2.139645E-5	32.225033	145
CGCTGTT	260	1.10958354E-10	30.675753	145
CGTGCGG	145	3.4862423E-5	30.002617	145
AGGGGTA	325	1.8189894E-12	29.000206	5
GGGGTAT	325	1.8189894E-12	28.997885	6
CGCAAGG	335	1.8189894E-12	28.136784	145
GGGTATC	365	7.2759576E-12	25.820036	7
AAATATA	1715	0.0	24.943867	145
CAGGGGT	410	3.8198777E-11	22.98797	4