SRR4896122_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896122_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	554538
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	69915	12.607792432619586	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	9990	1.8014996267162937	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	9072	1.6359564177747963	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	3522	0.6351232918212999	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2756	0.4969902874104209	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	1551	0.27969228438808524	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGTGAGTTAGATCGGAAGAGCAC	1310	0.23623268378361809	No Hit
AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA	766	0.13813300441087895	No Hit
GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG	603	0.10873916665765015	No Hit
AGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTG	587	0.10585388197021665	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	47745	0.0	62.195984	1
AGCAGTG	49630	0.0	59.7991	2
GTATCAA	49970	0.0	59.773228	9
AGTGGTA	49815	0.0	59.55709	5
CAGTGGT	50150	0.0	59.13567	4
GGTATCA	50610	0.0	59.037003	8
GCAGTGG	50465	0.0	58.752186	3
TGGTATC	50655	0.0	58.641033	7
GTGGTAT	50690	0.0	58.52903	6
CGGTCTG	125	1.8189894E-12	57.997444	145
AAATATA	2200	0.0	57.33838	145
TAGCGAA	45	0.009638571	48.3312	145
CAGGGCG	110	5.2616524E-6	39.54371	145
CGTATTT	80	0.0020362753	36.248398	145
CGCGGCT	105	1.8531346E-4	34.522285	145
AGGATAG	105	1.8531346E-4	34.522285	145
GCCGGCT	400	0.0	34.435978	145
CACGGGA	205	1.1372322E-8	31.827862	145
CACGGCT	260	1.10958354E-10	30.671722	145
CGATCGT	75	0.0	28.998722	120-124