SRR4896119_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896119_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	458751
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	48314	10.531639168089008	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	9428	2.0551453838792724	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	3239	0.7060475072533902	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3213	0.70037994467587	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	1799	0.3921517337291908	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	1631	0.3555305601513675	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	1481	0.3228330837425967	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	1053	0.2295362843895708	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGAAGCCAAGATCGGAAGAGCACA	741	0.16152553345932763	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT	715	0.15585797088180736	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCTAAACCTAGCCCCAAACCC	639	0.13929124950136348	No Hit
AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA	589	0.12839209069843988	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTTTGTGGGGTTTTCTTCTA	582	0.12686620846603058	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGATGTGAGGGCGATCTGGC	536	0.11683898236734089	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGCAATAGATATAGTACC	476	0.10375999180383258	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGATGCCCCTCATTTACATAAA	465	0.10136217686718939	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	44685	0.0	84.06851	1
AGCAGTG	45835	0.0	81.89594	2
AGTGGTA	47915	0.0	78.075005	5
GTATCAA	48065	0.0	78.040634	9
GGTATCA	48180	0.0	77.87789	8
GTGGTAT	48160	0.0	77.654305	6
TGGTATC	48370	0.0	77.31716	7
CAGTGGT	48545	0.0	77.10006	4
GCAGTGG	48865	0.0	76.65452	3
CCGATCT	80	5.8680234E-7	54.37316	145
AAATATA	1005	0.0	49.774437	145
CGCTGTT	165	2.7284841E-11	43.93791	145
AGGGGTA	215	0.0	43.84528	5
CCGCAAG	695	0.0	43.811466	145
TCGCTGT	290	0.0	42.498566	145
CGGTATC	155	7.385097E-10	42.099937	7
AGCGGTA	160	1.0059011E-9	40.788765	5
CATGCGG	200	5.456968E-12	39.873653	145
GCGGTAT	170	1.8244464E-9	38.38524	6
GTCCCTC	310	0.0	37.418087	145