Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896111_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 640916 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTGTTCTATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 1594 | 0.2487065387663906 | No Hit |
GTGTTCTAGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACT | 702 | 0.10953073413676674 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTTCTAG | 21015 | 0.0 | 144.05756 | 3 |
TGTTCTA | 64480 | 0.0 | 144.04305 | 2 |
GTTCTAA | 18425 | 0.0 | 143.3465 | 3 |
GTGTTCT | 65035 | 0.0 | 142.8138 | 1 |
GTTCTAT | 24245 | 0.0 | 142.17 | 3 |
TTCTAGG | 7530 | 0.0 | 140.5893 | 4 |
TTCTAGA | 5915 | 0.0 | 140.2645 | 4 |
TTCTAGT | 7895 | 0.0 | 140.23882 | 4 |
TTCTAAG | 6415 | 0.0 | 140.17552 | 4 |
CTATAGG | 865 | 0.0 | 139.89345 | 6 |
CTATGAG | 715 | 0.0 | 139.85245 | 6 |
TCTAGTG | 2450 | 0.0 | 139.596 | 5 |
TCTAGAG | 1870 | 0.0 | 139.49477 | 5 |
TCTATGG | 3140 | 0.0 | 139.15047 | 5 |
TCTATAG | 2560 | 0.0 | 138.97562 | 5 |
TTCTATG | 9050 | 0.0 | 138.35414 | 4 |
TCTAGGG | 2695 | 0.0 | 138.19788 | 5 |
CTAGTAG | 720 | 0.0 | 137.87486 | 6 |
TCTAGAT | 2115 | 0.0 | 137.72498 | 5 |
TCTAAGT | 2400 | 0.0 | 137.37167 | 5 |