SRR4896111_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896111_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	640916
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	25286	3.9452908025388664	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	6981	1.0892223005822916	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	4019	0.6270712542673299	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	2966	0.46277515306217976	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2826	0.44093141690954823	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTTAAGTTATTAAGGGCGCAC	1747	0.27257862184748083	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	987	0.15399833987605238	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT	946	0.14760124571706745	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCCAGGCACGGTGGCTC	711	0.11093497431800736	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	675	0.10531801359304495	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	27695	0.0	92.44207	1
AGCAGTG	28345	0.0	90.36631	2
GGTATCA	28405	0.0	90.32153	8
GTATCAA	28425	0.0	90.15596	9
GTGGTAT	28395	0.0	89.91932	6
CAGTGGT	28595	0.0	89.37343	4
TGGTATC	28615	0.0	89.25332	7
AGTGGTA	28800	0.0	88.70517	5
GCAGTGG	29275	0.0	87.32223	3
AAATATA	2285	0.0	51.079334	145
CCGCAAG	470	0.0	35.47607	145
AGAGAGT	635	0.0	35.391056	145
AATGGGG	830	0.0	30.570004	145
CACGGGC	195	8.753164E-6	26.023695	145
AAACCGC	1335	0.0	24.873903	85-89
CCGTCGT	180	1.5202256E-4	24.16486	145
GAAACCG	1410	0.0	23.962193	85-89
CATGGGG	6015	0.0	23.816084	25-29
GATAAGT	1470	0.0	23.476633	95-99
CGTGGGA	500	0.0	23.198263	145