SRR4896108_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896108_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	525978
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	58501	11.122328310309557	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	8771	1.6675602401621359	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2606	0.4954579849347311	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	2187	0.41579685842373637	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACTTGC	1430	0.2718744890470704	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	1308	0.24867960256892874	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	959	0.18232701747981855	No Hit
AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA	707	0.13441626836103412	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACTCAG	603	0.1146435782485199	No Hit
AGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTG	540	0.1026658909688238	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGTC	30	0.0019353562	72.49881	145
AAGCAGT	54605	0.0	72.32645	1
GTATCAA	55620	0.0	71.13017	9
GGTATCA	56015	0.0	70.71346	8
AGTGGTA	55910	0.0	70.35338	5
TGGTATC	56020	0.0	70.202286	7
GTGGTAT	56020	0.0	70.150505	6
AGCAGTG	56350	0.0	70.04235	2
CAGTGGT	56525	0.0	69.68436	4
GCAGTGG	57110	0.0	68.957855	3
CTTGCGA	85	5.338544E-5	42.64636	145
CATCGGG	85	5.338544E-5	42.64636	145
CGTGGGA	610	0.0	40.409176	145
AGGGGTA	465	0.0	35.869858	5
CATGCGG	125	1.2640914E-5	34.79943	145
CGTCGTA	190	5.4169504E-9	34.34154	145
GGGTATC	465	0.0	34.3103	7
GGGGTAT	490	0.0	32.559772	6
AGGTATC	325	0.0	31.239166	7
CGTGAGA	120	4.0558458E-4	30.207838	145