Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896102_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 731030 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 15773 | 2.1576405893055006 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3730 | 0.5102389778805247 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGACGCCGTGGCTCAT | 3533 | 0.48329069942410025 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGACGCCGTGGCTCATG | 3332 | 0.4557952478010478 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGTCAGCCACAGTGGCTCAT | 2829 | 0.3869882220975883 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 2185 | 0.2988933422704951 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGTCAGCCACAGTGGCTCATG | 2138 | 0.2924640575626171 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 2135 | 0.29205367768764623 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 1615 | 0.22092116602601808 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 1162 | 0.15895380490540742 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGACGCAGTGGCTCA | 1026 | 0.14034991724005855 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 908 | 0.12420830882453524 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCAGACGCAGTGGCTCAC | 829 | 0.11340163878363406 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGACACAGGATCCGGAGCTGGT | 820 | 0.11217049915872125 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 789 | 0.10792990711735496 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCAGGCACAGTGGCTCAC | 772 | 0.10560442115918635 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 26905 | 0.0 | 103.58393 | 1 |
GTATCAA | 27535 | 0.0 | 101.31097 | 9 |
GGTATCA | 27705 | 0.0 | 100.96479 | 8 |
AGCAGTG | 27670 | 0.0 | 100.72012 | 2 |
GTGGTAT | 27555 | 0.0 | 100.59346 | 6 |
AGTGGTA | 27770 | 0.0 | 99.8737 | 5 |
TGGTATC | 27830 | 0.0 | 99.78183 | 7 |
CAGTGGT | 27865 | 0.0 | 99.6249 | 4 |
GCAGTGG | 28940 | 0.0 | 95.97437 | 3 |
AGGTATC | 265 | 0.0 | 49.248444 | 7 |
AGCGGTA | 120 | 3.614332E-9 | 48.33974 | 5 |
GAGGTAT | 295 | 0.0 | 44.240128 | 6 |
GCGGTAT | 160 | 4.584217E-8 | 36.252327 | 6 |
CGGTATC | 160 | 4.584217E-8 | 36.252327 | 7 |
GGGGTAT | 245 | 1.8189894E-12 | 35.51248 | 6 |
CTACTAA | 3865 | 0.0 | 35.450207 | 145 |
AGCGCAT | 170 | 7.822928E-8 | 34.11517 | 145 |
AGAGGTA | 395 | 0.0 | 33.042355 | 5 |
AGGGGTA | 265 | 3.6379788E-12 | 32.83454 | 5 |
CGAGTAA | 200 | 8.920324E-9 | 32.63379 | 2 |