Basic Statistics
Measure | Value |
---|---|
Filename | SRR4896100_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 432085 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATAGACATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 9073 | 2.0998183227837113 | No Hit |
GATAGACATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGT | 1117 | 0.2585139498015437 | No Hit |
GATAGACATGTACTCTGCGTTGATACCACTGCGTCCCATGTACTCTGCGT | 1093 | 0.25295948713794736 | No Hit |
GATAGACATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTT | 1060 | 0.2453221009755025 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATAGAC | 43300 | 0.0 | 144.59827 | 1 |
ATAGACA | 43340 | 0.0 | 144.46481 | 2 |
TAGACAT | 17225 | 0.0 | 144.28523 | 3 |
TAGACAG | 13465 | 0.0 | 143.78615 | 3 |
AGACAGT | 4815 | 0.0 | 143.71234 | 4 |
AGACATG | 7740 | 0.0 | 143.69922 | 4 |
TAGACAA | 12050 | 0.0 | 143.05215 | 3 |
AGACATT | 5095 | 0.0 | 142.07193 | 4 |
GACAGTT | 1650 | 0.0 | 141.84224 | 5 |
GACATGT | 4155 | 0.0 | 141.60284 | 5 |
GACATTG | 1840 | 0.0 | 141.37207 | 5 |
AGACAAT | 4370 | 0.0 | 141.26843 | 4 |
GACATGA | 1365 | 0.0 | 141.20042 | 5 |
GACAGTC | 380 | 0.0 | 141.10262 | 5 |
GACAGAT | 1295 | 0.0 | 140.99957 | 5 |
GACAATG | 1450 | 0.0 | 140.91853 | 5 |
AGACATA | 4470 | 0.0 | 140.86374 | 4 |
ACATGTA | 2875 | 0.0 | 140.12769 | 6 |
GACATAG | 1625 | 0.0 | 140.01135 | 5 |
GACAGGT | 1605 | 0.0 | 139.95024 | 5 |