SRR4896099_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896099_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	916382
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	11903	1.2989124622701014	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5743	0.6267037108978569	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	3919	0.42766008062140026	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCAGGCGCGGTGGCTCA	3830	0.41794797366163894	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCAGGCGCGGTGGCTCAC	2670	0.29136320879283967	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCCGGGCACGGTGGCTC	2575	0.28099635304927423	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCACGGTGGCTCA	2330	0.2542607777106054	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	2146	0.2341818150072786	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	1687	0.1840935330462624	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	929	0.1013769366923401	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	28305	0.0	114.42676	1
GGTATCA	28965	0.0	112.6011	8
GTATCAA	29050	0.0	111.95423	9
GTGGTAT	29005	0.0	111.37061	6
AGCAGTG	29165	0.0	111.08292	2
AGTGGTA	29160	0.0	110.82836	5
TGGTATC	29220	0.0	110.57598	7
CAGTGGT	29710	0.0	108.84992	4
GCAGTGG	29735	0.0	108.75839	3
CGGTCTG	280	0.0	56.96289	145
GGGTATC	265	0.0	49.262894	7
AGCGGTA	110	9.930227E-8	46.152863	5
AGGTATC	335	0.0	45.464016	7
AGGGGTA	315	0.0	43.7458	5
GGGGTAT	300	0.0	43.515556	6
GCGGTAT	125	2.7109854E-7	40.61452	6
GAGGTAT	405	0.0	37.606037	6
CGGTATC	135	4.9568735E-7	37.606037	7
AGAGGTA	440	0.0	36.262962	5
CGATAAG	160	1.877248E-6	31.717976	145