SRR4896097_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896097_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	593984
Sequences flagged as poor quality	0
Sequence length	151
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	18905	3.182745663182847	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5004	0.8424469345975649	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	2499	0.4207184031893115	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	1402	0.23603329382609634	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCGCGGTGGCTCA	1097	0.18468510936321517	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGGGCCTTTCCAAGATTGC	803	0.13518882663506088	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGATTGCTGTTTTTGTTTT	725	0.12205715978881586	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGTGGGAAGATTTATAGGTA	619	0.1042115612541752	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	597	0.10050775778472149	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	42345	0.0	114.4911	1
AGCAGTG	43310	0.0	111.79676	2
GTATCAA	43485	0.0	111.63027	9
AGTGGTA	43290	0.0	111.49674	5
GGTATCA	43625	0.0	111.371735	8
CAGTGGT	43415	0.0	111.20912	4
GTGGTAT	43455	0.0	111.023346	6
TGGTATC	43635	0.0	110.66503	7
GCAGTGG	43895	0.0	110.0756	3
AGGGGTA	305	0.0	57.044975	5
GGGTATC	345	0.0	50.431065	7
CGATAAA	60	4.945248E-4	48.32977	145
AGGTATC	315	0.0	48.329765	7
GAGGTAT	315	0.0	48.329765	6
GGGGTAT	370	0.0	47.02356	6
AGAGGTA	345	0.0	44.127182	5
CACGGGG	125	1.264863E-5	34.797436	145
CAGGGGT	505	0.0	34.452908	4
CTCGGCG	160	1.8764986E-6	31.716412	145
TTACGGA	120	4.0578353E-4	30.206106	145