SRR4896096_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4896096_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1565153
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	25749	1.645142679341892	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	11109	0.7097708658514534	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG	5563	0.3554285108229036	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	3474	0.22195913115203433	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCCCATATTTGATCTGT	2796	0.17864068241251815	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC	2183	0.13947518229847178	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTGGGTGCGGTGGCTCACG	1828	0.11679369365167494	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCACGGTGGCTCATG	1762	0.11257685350889018	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC	1748	0.11168237226648131	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCCCATATTTGATCTGTC	1739	0.11110734861064701	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCACGGTGGCTCA	1677	0.10714607453712194	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	71800	0.0	118.9547	1
GGTATCA	73400	0.0	116.80622	8
GTGGTAT	73095	0.0	116.31154	6
GTATCAA	73670	0.0	116.24386	9
AGCAGTG	73485	0.0	116.22963	2
AGTGGTA	73265	0.0	116.11217	5
TGGTATC	73465	0.0	115.88367	7
CAGTGGT	73750	0.0	115.41865	4
GCAGTGG	74625	0.0	114.17223	3
AGGGGTA	685	0.0	57.16661	5
GGGTATC	890	0.0	43.180084	7
GGGGTAT	910	0.0	42.23107	6
CAGGGGT	980	0.0	39.962128	4
AGGTATC	660	0.0	39.550884	7
GAGGTAT	670	0.0	38.96057	6
CGGTATC	305	0.0	38.03801	7
AGCGGTA	330	0.0	35.159714	5
AGAGGTA	780	0.0	33.46934	5
GCGGTAT	360	0.0	32.226646	6
CTCGACT	255	3.0286174E-9	28.429825	145